FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7520, 248 aa 1>>>pF1KB7520 248 - 248 aa - 248 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5165+/-0.00091; mu= 13.3999+/- 0.054 mean_var=66.2691+/-13.461, 0's: 0 Z-trim(105.2): 58 B-trim: 60 in 1/47 Lambda= 0.157550 statistics sampled from 8215 (8275) to 8215 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.254), width: 16 Scan time: 2.130 The best scores are: opt bits E(32554) CCDS9082.1 SPIC gene_id:121599|Hs108|chr12 ( 248) 1695 394.0 4.9e-110 CCDS7933.2 SPI1 gene_id:6688|Hs108|chr11 ( 270) 399 99.5 2.5e-21 CCDS44591.1 SPI1 gene_id:6688|Hs108|chr11 ( 271) 399 99.5 2.5e-21 CCDS58674.1 SPIB gene_id:6689|Hs108|chr19 ( 171) 378 94.6 4.6e-20 CCDS33080.1 SPIB gene_id:6689|Hs108|chr19 ( 262) 380 95.1 4.8e-20 >>CCDS9082.1 SPIC gene_id:121599|Hs108|chr12 (248 aa) initn: 1695 init1: 1695 opt: 1695 Z-score: 2089.0 bits: 394.0 E(32554): 4.9e-110 Smith-Waterman score: 1695; 100.0% identity (100.0% similar) in 248 aa overlap (1-248:1-248) 10 20 30 40 50 60 pF1KB7 MTCVEQDKLGQAFEDAFEVLRQHSTGDLQYSPDYRNYLALINHRPHVKGNSSCYGVLPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 MTCVEQDKLGQAFEDAFEVLRQHSTGDLQYSPDYRNYLALINHRPHVKGNSSCYGVLPTE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 EPVYNWRTVINSAADFYFEGNIHQSLQNITENQLVQPTLLQQKGGKGRKKLRLFEYLHES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 EPVYNWRTVINSAADFYFEGNIHQSLQNITENQLVQPTLLQQKGGKGRKKLRLFEYLHES 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 LYNPEMASCIQWVDKTKGIFQFVSKNKEKLAELWGKRKGNRKTMTYQKMARALRNYGRSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 LYNPEMASCIQWVDKTKGIFQFVSKNKEKLAELWGKRKGNRKTMTYQKMARALRNYGRSG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 EITKIRRKLTYQFSEAILQRLSPSYFLGKEIFYSQCVQPDQEYLSLNNWNANYNYTYANY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 EITKIRRKLTYQFSEAILQRLSPSYFLGKEIFYSQCVQPDQEYLSLNNWNANYNYTYANY 190 200 210 220 230 240 pF1KB7 HELNHHDC :::::::: CCDS90 HELNHHDC >>CCDS7933.2 SPI1 gene_id:6688|Hs108|chr11 (270 aa) initn: 428 init1: 386 opt: 399 Z-score: 496.4 bits: 99.5 E(32554): 2.5e-21 Smith-Waterman score: 399; 57.7% identity (77.9% similar) in 104 aa overlap (97-200:157-259) 70 80 90 100 110 120 pF1KB7 RTVINSAADFYFEGNIHQSLQNITENQLVQPTLLQQKGGKGRKKLRLFEYLHESLYNPEM : :: . :. .::.::...: . : . .: CCDS79 AQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGS-KKKIRLYQFLLDLLRSGDM 130 140 150 160 170 180 130 140 150 160 170 180 pF1KB7 ASCIQWVDKTKGIFQFVSKNKEKLAELWGKRKGNRKTMTYQKMARALRNYGRSGEITKIR . : :::: :: ::: ::.:: ::. :: .::::: ::::::::::::::..::. :.. CCDS79 KDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKVK 190 200 210 220 230 240 190 200 210 220 230 240 pF1KB7 RKLTYQFSEAILQRLSPSYFLGKEIFYSQCVQPDQEYLSLNNWNANYNYTYANYHELNHH .::::::: .: : CCDS79 KKLTYQFSGEVLGRGGLAERRHPPH 250 260 270 >>CCDS44591.1 SPI1 gene_id:6688|Hs108|chr11 (271 aa) initn: 428 init1: 386 opt: 399 Z-score: 496.4 bits: 99.5 E(32554): 2.5e-21 Smith-Waterman score: 399; 57.7% identity (77.9% similar) in 104 aa overlap (97-200:158-260) 70 80 90 100 110 120 pF1KB7 RTVINSAADFYFEGNIHQSLQNITENQLVQPTLLQQKGGKGRKKLRLFEYLHESLYNPEM : :: . :. .::.::...: . : . .: CCDS44 AQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGS-KKKIRLYQFLLDLLRSGDM 130 140 150 160 170 180 130 140 150 160 170 180 pF1KB7 ASCIQWVDKTKGIFQFVSKNKEKLAELWGKRKGNRKTMTYQKMARALRNYGRSGEITKIR . : :::: :: ::: ::.:: ::. :: .::::: ::::::::::::::..::. :.. CCDS44 KDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYQKMARALRNYGKTGEVKKVK 190 200 210 220 230 240 190 200 210 220 230 240 pF1KB7 RKLTYQFSEAILQRLSPSYFLGKEIFYSQCVQPDQEYLSLNNWNANYNYTYANYHELNHH .::::::: .: : CCDS44 KKLTYQFSGEVLGRGGLAERRHPPH 250 260 270 >>CCDS58674.1 SPIB gene_id:6689|Hs108|chr19 (171 aa) initn: 397 init1: 375 opt: 378 Z-score: 473.7 bits: 94.6 E(32554): 4.6e-20 Smith-Waterman score: 378; 43.5% identity (68.0% similar) in 147 aa overlap (55-198:20-165) 30 40 50 60 70 80 pF1KB7 TGDLQYSPDYRNYLALINHRPHVKGNSSCYGVLPTEEPVYNWRT--VINSAADFYFEGNI :.: :.: :.. :. ... CCDS58 MASSMTWTAASIPATLIQRGLLTLVPPAYAPYPSPVLSEEEDLPLDSPA 10 20 30 40 90 100 110 120 130 140 pF1KB7 HQSLQNITENQLVQ-PTLLQQKGGKGRKKLRLFEYLHESLYNPEMASCIQWVDKTKGIFQ . .. ... :: : ...: ::::::...: : .: :. ::. :.:: CCDS58 LEVSDSESDEALVAGPEGKGSEAGT-RKKLRLYQFLLGLLTRGDMRECVWWVEPGAGVFQ 50 60 70 80 90 100 150 160 170 180 190 200 pF1KB7 FVSKNKEKLAELWGKRKGNRKTMTYQKMARALRNYGRSGEITKIRRKLTYQFSEAILQRL : ::.:: ::. ::..::::: :::::.:::::::...::: :..:::::::. :.: CCDS58 FSSKHKELLARRWGQQKGNRKRMTYQKLARALRNYAKTGEIRKVKRKLTYQFDSALLPAV 110 120 130 140 150 160 210 220 230 240 pF1KB7 SPSYFLGKEIFYSQCVQPDQEYLSLNNWNANYNYTYANYHELNHHDC CCDS58 RRA 170 >>CCDS33080.1 SPIB gene_id:6689|Hs108|chr19 (262 aa) initn: 397 init1: 375 opt: 380 Z-score: 473.3 bits: 95.1 E(32554): 4.8e-20 Smith-Waterman score: 386; 36.0% identity (63.5% similar) in 200 aa overlap (11-198:59-256) 10 20 30 40 pF1KB7 MTCVEQDKLGQAFEDAFEVLRQHSTGDLQYSPDYRNYLAL .::. : .. . ....: : : . . CCDS33 CKHSSYPDSEGAPDSLWDWTVAPPVPATPYEAFDPAAAAFSHPQAAQLCYEPPTYSPAGN 30 40 50 60 70 80 50 60 70 80 90 pF1KB7 INHRPHVKGNSSCYGVLPTEE--------PVYNWRT--VINSAADFYFEGNIHQSLQNIT .. : ... . . :::. :.: :.. :. ... . .. . CCDS33 LELAPSLEAPGPGLPAYPTENFASQTLVPPAYAPYPSPVLSEEEDLPLDSPALEVSDSES 90 100 110 120 130 140 100 110 120 130 140 pF1KB7 ENQLVQPTLLQQKGGKG--RKKLRLFEYLHESLYNPEMASCIQWVDKTKGIFQFVSKNKE .. :: . ::... ::::::...: : .: :. ::. :.::: ::.:: CCDS33 DEALVAGP--EGKGSEAGTRKKLRLYQFLLGLLTRGDMRECVWWVEPGAGVFQFSSKHKE 150 160 170 180 190 200 150 160 170 180 190 200 pF1KB7 KLAELWGKRKGNRKTMTYQKMARALRNYGRSGEITKIRRKLTYQFSEAILQRLSPSYFLG ::. ::..::::: :::::.:::::::...::: :..:::::::. :.: CCDS33 LLARRWGQQKGNRKRMTYQKLARALRNYAKTGEIRKVKRKLTYQFDSALLPAVRRA 210 220 230 240 250 260 210 220 230 240 pF1KB7 KEIFYSQCVQPDQEYLSLNNWNANYNYTYANYHELNHHDC 248 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:45:19 2016 done: Sun Nov 6 14:45:19 2016 Total Scan time: 2.130 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]