FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6166, 603 aa 1>>>pF1KB6166 603 - 603 aa - 603 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5514+/-0.000505; mu= 13.0153+/- 0.031 mean_var=99.2077+/-20.353, 0's: 0 Z-trim(110.1): 408 B-trim: 0 in 0/52 Lambda= 0.128766 statistics sampled from 18007 (18421) to 18007 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.572), E-opt: 0.2 (0.216), width: 16 Scan time: 9.540 The best scores are: opt bits E(85289) NP_003288 (OMIM: 601529) nuclear receptor subfamil ( 603) 3977 750.1 4.8e-216 XP_005269190 (OMIM: 601529) PREDICTED: nuclear rec ( 598) 3926 740.6 3.4e-213 XP_011537018 (OMIM: 601529) PREDICTED: nuclear rec ( 521) 3384 639.9 6.2e-183 XP_006719647 (OMIM: 601529) PREDICTED: nuclear rec ( 557) 3099 587.0 5.7e-167 NP_001120834 (OMIM: 601529) nuclear receptor subfa ( 483) 3075 582.5 1.1e-165 NP_001027458 (OMIM: 601529) nuclear receptor subfa ( 467) 3067 581.0 3e-165 XP_006719648 (OMIM: 601529) PREDICTED: nuclear rec ( 426) 2763 524.5 2.8e-148 XP_011537019 (OMIM: 601529) PREDICTED: nuclear rec ( 507) 2133 407.5 5.5e-113 XP_016862609 (OMIM: 601426) PREDICTED: nuclear rec ( 596) 1488 287.7 7.4e-77 NP_001278623 (OMIM: 601426) nuclear receptor subfa ( 596) 1488 287.7 7.4e-77 XP_011532365 (OMIM: 601426) PREDICTED: nuclear rec ( 629) 1488 287.7 7.8e-77 XP_011532368 (OMIM: 601426) PREDICTED: nuclear rec ( 615) 1470 284.4 7.7e-76 XP_011532367 (OMIM: 601426) PREDICTED: nuclear rec ( 615) 1470 284.4 7.7e-76 NP_003289 (OMIM: 601426) nuclear receptor subfamil ( 615) 1470 284.4 7.7e-76 XP_011532366 (OMIM: 601426) PREDICTED: nuclear rec ( 615) 1470 284.4 7.7e-76 XP_016862608 (OMIM: 601426) PREDICTED: nuclear rec ( 648) 1470 284.4 8.1e-76 XP_016862607 (OMIM: 601426) PREDICTED: nuclear rec ( 648) 1470 284.4 8.1e-76 XP_011532363 (OMIM: 601426) PREDICTED: nuclear rec ( 648) 1470 284.4 8.1e-76 XP_011532361 (OMIM: 601426) PREDICTED: nuclear rec ( 648) 1470 284.4 8.1e-76 XP_011532360 (OMIM: 601426) PREDICTED: nuclear rec ( 648) 1470 284.4 8.1e-76 NP_008848 (OMIM: 180247) retinoic acid receptor RX ( 463) 470 98.6 5.1e-20 NP_001243499 (OMIM: 180247) retinoic acid receptor ( 340) 465 97.6 7.5e-20 NP_001243500 (OMIM: 180247) retinoic acid receptor ( 340) 465 97.6 7.5e-20 XP_016865286 (OMIM: 132890,615722) PREDICTED: COUP ( 273) 447 94.2 6.3e-19 NP_001138628 (OMIM: 107773,615779) COUP transcript ( 261) 442 93.2 1.2e-18 NP_001138629 (OMIM: 107773,615779) COUP transcript ( 261) 442 93.2 1.2e-18 NP_001138627 (OMIM: 107773,615779) COUP transcript ( 281) 442 93.2 1.2e-18 XP_016866665 (OMIM: 180246) PREDICTED: retinoic ac ( 414) 439 92.8 2.5e-18 XP_005249335 (OMIM: 180246) PREDICTED: retinoic ac ( 441) 439 92.8 2.7e-18 NP_068811 (OMIM: 180246) retinoic acid receptor RX ( 533) 439 92.8 3.1e-18 NP_001257330 (OMIM: 180246) retinoic acid receptor ( 537) 439 92.8 3.1e-18 NP_001278850 (OMIM: 180245) retinoic acid receptor ( 365) 436 92.2 3.3e-18 NP_001278849 (OMIM: 180245) retinoic acid receptor ( 435) 436 92.2 3.9e-18 NP_002948 (OMIM: 180245) retinoic acid receptor RX ( 462) 436 92.2 4.1e-18 NP_001278918 (OMIM: 180246) retinoic acid receptor ( 347) 432 91.4 5.3e-18 XP_011513098 (OMIM: 180246) PREDICTED: retinoic ac ( 420) 433 91.7 5.5e-18 NP_849181 (OMIM: 125850,125853,600281,616026) hepa ( 417) 431 91.3 7.1e-18 NP_849180 (OMIM: 125850,125853,600281,616026) hepa ( 464) 431 91.3 7.8e-18 NP_000448 (OMIM: 125850,125853,600281,616026) hepa ( 474) 431 91.3 7.9e-18 NP_004124 (OMIM: 605966) hepatocyte nuclear factor ( 445) 424 90.0 1.8e-17 NP_005225 (OMIM: 132880) nuclear receptor subfamil ( 404) 422 89.6 2.2e-17 NP_001274113 (OMIM: 125850,125853,600281,616026) h ( 392) 421 89.4 2.4e-17 NP_001025175 (OMIM: 125850,125853,600281,616026) h ( 395) 421 89.4 2.5e-17 NP_005645 (OMIM: 132890,615722) COUP transcription ( 423) 421 89.4 2.6e-17 NP_001274111 (OMIM: 125850,125853,600281,616026) h ( 439) 421 89.4 2.7e-17 NP_001025174 (OMIM: 125850,125853,600281,616026) h ( 442) 421 89.4 2.7e-17 NP_001274112 (OMIM: 125850,125853,600281,616026) h ( 449) 421 89.4 2.7e-17 NP_787110 (OMIM: 125850,125853,600281,616026) hepa ( 452) 421 89.5 2.7e-17 NP_001245284 (OMIM: 125850,125853,600281,616026) h ( 467) 421 89.5 2.8e-17 XP_005260464 (OMIM: 125850,125853,600281,616026) P ( 513) 421 89.5 3.1e-17 >>NP_003288 (OMIM: 601529) nuclear receptor subfamily 2 (603 aa) initn: 3977 init1: 3977 opt: 3977 Z-score: 3999.6 bits: 750.1 E(85289): 4.8e-216 Smith-Waterman score: 3977; 100.0% identity (100.0% similar) in 603 aa overlap (1-603:1-603) 10 20 30 40 50 60 pF1KB6 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB6 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB6 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDKMSTERRKLLMEHIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDKMSTERRKLLMEHIF 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB6 KLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQEKAYVEFQDYITKTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 KLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQEKAYVEFQDYITKTY 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB6 PDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNIRIDSVIPHILKMEPADYNSQIIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 PDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNIRIDSVIPHILKMEPADYNSQIIG 550 560 570 580 590 600 pF1KB6 HSI ::: NP_003 HSI >>XP_005269190 (OMIM: 601529) PREDICTED: nuclear recepto (598 aa) initn: 3072 init1: 3072 opt: 3926 Z-score: 3948.5 bits: 740.6 E(85289): 3.4e-213 Smith-Waterman score: 3926; 99.2% identity (99.2% similar) in 603 aa overlap (1-603:1-598) 10 20 30 40 50 60 pF1KB6 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB6 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB6 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDKMSTERRKLLMEHIF :::::::::::::::::::::::::::::::::::::::::::: ::::::::::: XP_005 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQ-----ERRKLLMEHIF 430 440 450 460 470 490 500 510 520 530 540 pF1KB6 KLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQEKAYVEFQDYITKTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQEKAYVEFQDYITKTY 480 490 500 510 520 530 550 560 570 580 590 600 pF1KB6 PDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNIRIDSVIPHILKMEPADYNSQIIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNIRIDSVIPHILKMEPADYNSQIIG 540 550 560 570 580 590 pF1KB6 HSI ::: XP_005 HSI >>XP_011537018 (OMIM: 601529) PREDICTED: nuclear recepto (521 aa) initn: 3453 init1: 3384 opt: 3384 Z-score: 3405.2 bits: 639.9 E(85289): 6.2e-183 Smith-Waterman score: 3384; 99.6% identity (99.8% similar) in 513 aa overlap (1-513:1-513) 10 20 30 40 50 60 pF1KB6 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB6 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB6 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDKMSTERRKLLMEHIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDKMSTERRKLLMEHIF 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB6 KLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQEKAYVEFQDYITKTY :::::::::::::::::::::::::::::: .: XP_011 KLQEFCNSMVKLCIDGYEYAYLKAIVLFSPGYPDYYSDCQL 490 500 510 520 550 560 570 580 590 600 pF1KB6 PDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNIRIDSVIPHILKMEPADYNSQIIG >>XP_006719647 (OMIM: 601529) PREDICTED: nuclear recepto (557 aa) initn: 3151 init1: 3082 opt: 3099 Z-score: 3118.6 bits: 587.0 E(85289): 5.7e-167 Smith-Waterman score: 3569; 92.4% identity (92.4% similar) in 603 aa overlap (1-603:1-557) 10 20 30 40 50 60 pF1KB6 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB6 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB6 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDKMSTERRKLLMEHIF ::::::::::::::::::::::::::::::::::::::::::::: XP_006 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQD--------------- 430 440 450 460 490 500 510 520 530 540 pF1KB6 KLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQEKAYVEFQDYITKTY ::::::::::::::::::::::::::::: XP_006 -------------------------------HPSLENMEQIEKFQEKAYVEFQDYITKTY 470 480 490 550 560 570 580 590 600 pF1KB6 PDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNIRIDSVIPHILKMEPADYNSQIIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNIRIDSVIPHILKMEPADYNSQIIG 500 510 520 530 540 550 pF1KB6 HSI ::: XP_006 HSI >>NP_001120834 (OMIM: 601529) nuclear receptor subfamily (483 aa) initn: 3075 init1: 3075 opt: 3075 Z-score: 3095.5 bits: 582.5 E(85289): 1.1e-165 Smith-Waterman score: 3075; 100.0% identity (100.0% similar) in 465 aa overlap (1-465:1-465) 10 20 30 40 50 60 pF1KB6 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB6 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB6 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDKMSTERRKLLMEHIF ::::::::::::::::::::::::::::::::::::::::::::: NP_001 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDAKVIAALIHFTRRAI 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB6 KLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQEKAYVEFQDYITKTY NP_001 TDL >>NP_001027458 (OMIM: 601529) nuclear receptor subfamily (467 aa) initn: 3067 init1: 3067 opt: 3067 Z-score: 3087.7 bits: 581.0 E(85289): 3e-165 Smith-Waterman score: 3067; 100.0% identity (100.0% similar) in 464 aa overlap (1-464:1-464) 10 20 30 40 50 60 pF1KB6 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB6 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB6 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDKMSTERRKLLMEHIF :::::::::::::::::::::::::::::::::::::::::::: NP_001 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQAEG 430 440 450 460 490 500 510 520 530 540 pF1KB6 KLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQEKAYVEFQDYITKTY >>XP_006719648 (OMIM: 601529) PREDICTED: nuclear recepto (426 aa) initn: 2763 init1: 2763 opt: 2763 Z-score: 2783.1 bits: 524.5 E(85289): 2.8e-148 Smith-Waterman score: 2763; 100.0% identity (100.0% similar) in 426 aa overlap (178-603:1-426) 150 160 170 180 190 200 pF1KB6 SCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKI :::::::::::::::::::::::::::::: XP_006 MKQDSVQCERKPIEVSREKSSNCAASTEKI 10 20 30 210 220 230 240 250 260 pF1KB6 YIRKDLRSPLTATPTFVTDSESTRSTGLLDSGMFMNIHPSGVKTESAVLMTSDKAESCQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 YIRKDLRSPLTATPTFVTDSESTRSTGLLDSGMFMNIHPSGVKTESAVLMTSDKAESCQG 40 50 60 70 80 90 270 280 290 300 310 320 pF1KB6 DLSTLANVVTSLANLGKTKDLSQNSNEMSMIESLSNDDTSLCEFQEMQTNGDVSRAFDTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 DLSTLANVVTSLANLGKTKDLSQNSNEMSMIESLSNDDTSLCEFQEMQTNGDVSRAFDTL 100 110 120 130 140 150 330 340 350 360 370 380 pF1KB6 AKALNPGESTACQSSVAGMEGSVHLITGDSSINYTEKEGPLLSDSHVAFRLTMPSPMPEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 AKALNPGESTACQSSVAGMEGSVHLITGDSSINYTEKEGPLLSDSHVAFRLTMPSPMPEY 160 170 180 190 200 210 390 400 410 420 430 440 pF1KB6 LNVHYIGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTLGLAQCWQVMNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LNVHYIGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTLGLAQCWQVMNV 220 230 240 250 260 270 450 460 470 480 490 500 pF1KB6 ATILATFVNCLHNSLQQDKMSTERRKLLMEHIFKLQEFCNSMVKLCIDGYEYAYLKAIVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 ATILATFVNCLHNSLQQDKMSTERRKLLMEHIFKLQEFCNSMVKLCIDGYEYAYLKAIVL 280 290 300 310 320 330 510 520 530 540 550 560 pF1KB6 FSPDHPSLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 FSPDHPSLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEE 340 350 360 370 380 390 570 580 590 600 pF1KB6 LFFKGLIGNIRIDSVIPHILKMEPADYNSQIIGHSI :::::::::::::::::::::::::::::::::::: XP_006 LFFKGLIGNIRIDSVIPHILKMEPADYNSQIIGHSI 400 410 420 >>XP_011537019 (OMIM: 601529) PREDICTED: nuclear recepto (507 aa) initn: 2133 init1: 2133 opt: 2133 Z-score: 2149.4 bits: 407.5 E(85289): 5.5e-113 Smith-Waterman score: 3146; 84.1% identity (84.1% similar) in 603 aa overlap (1-603:1-507) 10 20 30 40 50 60 pF1KB6 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQFILTNHDGSTPSKVILA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RQDSTPGKVFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDLCVVCGDKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQRCIAFGMKQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRSTGLLDSGM 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FMNIHPSGVKTESAVLMTSDKAESCQGDLSTLANVVTSLANLGKTKDLSQNSNEMSMIES 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 LSNDDTSLCEFQEMQTNGDVSRAFDTLAKALNPGESTACQSSVAGMEGSVHLITGDSSIN :::::::::::::::::::::: XP_011 LSNDDTSLCEFQEMQTNGDVSR-------------------------------------- 310 320 370 380 390 400 410 420 pF1KB6 YTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMHWALSIPSFQALGQE :: XP_011 ----------------------------------------------------------QE 430 440 450 460 470 480 pF1KB6 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDKMSTERRKLLMEHIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDKMSTERRKLLMEHIF 330 340 350 360 370 380 490 500 510 520 530 540 pF1KB6 KLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQEKAYVEFQDYITKTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQEKAYVEFQDYITKTY 390 400 410 420 430 440 550 560 570 580 590 600 pF1KB6 PDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNIRIDSVIPHILKMEPADYNSQIIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNIRIDSVIPHILKMEPADYNSQIIG 450 460 470 480 490 500 pF1KB6 HSI ::: XP_011 HSI >>XP_016862609 (OMIM: 601426) PREDICTED: nuclear recepto (596 aa) initn: 2447 init1: 1238 opt: 1488 Z-score: 1500.8 bits: 287.7 E(85289): 7.4e-77 Smith-Waterman score: 2357; 62.7% identity (82.4% similar) in 601 aa overlap (11-603:17-596) 10 20 30 40 50 pF1KB6 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQ-FILTNHDGST . : .:::.::::::::::::.: . . :: ::::. ::. XP_016 MTSPSPRIQIISTDSAVASPQRIQIVTDQQTGQKIQIVTAVDASGSPKQQFILTSPDGAG 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB6 PSKVILARQDSTPGK-VFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDL .::::: ... .: ...:: : ... ..: . :...: :: : : .: . XP_016 TGKVILASPETSSAKQLIFTTSDNLVPGRIQIVTDSASVERLLGKTDV---QRP-QVVEY 70 80 90 100 110 120 130 140 150 160 170 pF1KB6 CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQR ::::::::::::::::.:::::::::::.::::.::::...:::::::::::::.:::.. XP_016 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKK 120 130 140 150 160 170 180 190 200 210 220 230 pF1KB6 CIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRS :. .:::..::: ::::..:.::: :::::::::::::::::::: ::::::.:....:. XP_016 CLEMGMKMESVQSERKPFDVQREKPSNCAASTEKIYIRKDLRSPLIATPTFVADKDGARQ 180 190 200 210 220 230 240 250 260 270 280 290 pF1KB6 TGLLDSGMFMNIHPSGVKTESAVLMTSD-KAESCQGDLSTLANVVTSLANLGKTKDLSQN ::::: ::..::. .. ...::...: :::. :: :.::::::::::::. XP_016 TGLLDPGMLVNIQQPLIREDGTVLLATDSKAETSQGALGTLANVVTSLANLS-------- 240 250 260 270 280 300 310 320 330 340 pF1KB6 SNEMSMIESLSNDDTSLCEFQ-EMQTNGDVSRAFDTLAKALNPGESTACQSSVAGME--- :::.: ::: :.: : :. ....::::::::::: .:.. : . :.. XP_016 -------ESLNNGDTS--EIQPEDQSASEITRAFDTLAKALNTTDSSSSPSLADGIDTSG 290 300 310 320 330 350 360 370 380 390 400 pF1KB6 -GSVHLITGDSSINYTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMH ::.:.:. :.: : :::::::.::.:.:::::::::::::::: :::::::::::: XP_016 GGSIHVISRDQSTPIIEVEGPLLSDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMH 340 350 360 370 380 390 410 420 430 440 450 460 pF1KB6 WALSIPSFQALGQENSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDK :: :::.::::::. . :::.: :::::::::::: :::...::::..:: :.::.:.:: XP_016 WARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILAAIVNHLQNSIQEDK 400 410 420 430 440 450 470 480 490 500 510 520 pF1KB6 MSTERRKLLMEHIFKLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQE .: .: : .::::.:::::::::.:: ::::::::::::::::::::.: . ::::::: XP_016 LSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSTSQIEKFQE 460 470 480 490 500 510 530 540 550 560 570 580 pF1KB6 KAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNIRIDSVIPHI :: .:.:::. ::: .:::::.:.:.::::::::...::::::: :::::. :::.::.: XP_016 KAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEELFFTGLIGNVSIDSIIPYI 520 530 540 550 560 570 590 600 pF1KB6 LKMEPADYNSQIIGHSI :::: :.::.:: : :. XP_016 LKMETAEYNGQITGASL 580 590 >>NP_001278623 (OMIM: 601426) nuclear receptor subfamily (596 aa) initn: 2447 init1: 1238 opt: 1488 Z-score: 1500.8 bits: 287.7 E(85289): 7.4e-77 Smith-Waterman score: 2357; 62.7% identity (82.4% similar) in 601 aa overlap (11-603:17-596) 10 20 30 40 50 pF1KB6 MATIEEIAHQIIEQQMGEIVTEQQTGQKIQIVTALDHNTQGKQ-FILTNHDGST . : .:::.::::::::::::.: . . :: ::::. ::. NP_001 MTSPSPRIQIISTDSAVASPQRIQIVTDQQTGQKIQIVTAVDASGSPKQQFILTSPDGAG 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB6 PSKVILARQDSTPGK-VFLTTPDAAGVNQLFFTTPDLSAQHLQLLTDNSPDQGPNKVFDL .::::: ... .: ...:: : ... ..: . :...: :: : : .: . NP_001 TGKVILASPETSSAKQLIFTTSDNLVPGRIQIVTDSASVERLLGKTDV---QRP-QVVEY 70 80 90 100 110 120 130 140 150 160 170 pF1KB6 CVVCGDKASGRHYGAVTCEGCKGFFKRSIRKNLVYSCRGSKDCIINKHHRNRCQYCRLQR ::::::::::::::::.:::::::::::.::::.::::...:::::::::::::.:::.. NP_001 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKK 120 130 140 150 160 170 180 190 200 210 220 230 pF1KB6 CIAFGMKQDSVQCERKPIEVSREKSSNCAASTEKIYIRKDLRSPLTATPTFVTDSESTRS :. .:::..::: ::::..:.::: :::::::::::::::::::: ::::::.:....:. NP_001 CLEMGMKMESVQSERKPFDVQREKPSNCAASTEKIYIRKDLRSPLIATPTFVADKDGARQ 180 190 200 210 220 230 240 250 260 270 280 290 pF1KB6 TGLLDSGMFMNIHPSGVKTESAVLMTSD-KAESCQGDLSTLANVVTSLANLGKTKDLSQN ::::: ::..::. .. ...::...: :::. :: :.::::::::::::. NP_001 TGLLDPGMLVNIQQPLIREDGTVLLATDSKAETSQGALGTLANVVTSLANLS-------- 240 250 260 270 280 300 310 320 330 340 pF1KB6 SNEMSMIESLSNDDTSLCEFQ-EMQTNGDVSRAFDTLAKALNPGESTACQSSVAGME--- :::.: ::: :.: : :. ....::::::::::: .:.. : . :.. NP_001 -------ESLNNGDTS--EIQPEDQSASEITRAFDTLAKALNTTDSSSSPSLADGIDTSG 290 300 310 320 330 350 360 370 380 390 400 pF1KB6 -GSVHLITGDSSINYTEKEGPLLSDSHVAFRLTMPSPMPEYLNVHYIGESASRLLFLSMH ::.:.:. :.: : :::::::.::.:.:::::::::::::::: :::::::::::: NP_001 GGSIHVISRDQSTPIIEVEGPLLSDTHVTFKLTMPSPMPEYLNVHYICESASRLLFLSMH 340 350 360 370 380 390 410 420 430 440 450 460 pF1KB6 WALSIPSFQALGQENSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDK :: :::.::::::. . :::.: :::::::::::: :::...::::..:: :.::.:.:: NP_001 WARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILAAIVNHLQNSIQEDK 400 410 420 430 440 450 470 480 490 500 510 520 pF1KB6 MSTERRKLLMEHIFKLQEFCNSMVKLCIDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQE .: .: : .::::.:::::::::.:: ::::::::::::::::::::.: . ::::::: NP_001 LSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSTSQIEKFQE 460 470 480 490 500 510 530 540 550 560 570 580 pF1KB6 KAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNIRIDSVIPHI :: .:.:::. ::: .:::::.:.:.::::::::...::::::: :::::. :::.::.: NP_001 KAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEELFFTGLIGNVSIDSIIPYI 520 530 540 550 560 570 590 600 pF1KB6 LKMEPADYNSQIIGHSI :::: :.::.:: : :. NP_001 LKMETAEYNGQITGASL 580 590 603 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:45:52 2016 done: Sun Nov 6 14:45:54 2016 Total Scan time: 9.540 Total Display time: 0.120 Function used was FASTA [36.3.4 Apr, 2011]