Result of FASTA (omim) for
pFN21AB7637
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7637, 326 aa
1>>>pF1KB7637 326 - 326 aa - 326 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8856+/-0.000385; mu= 13.8596+/- 0.024
mean_var=111.0377+/-23.951, 0's: 0 Z-trim(114.3): 310 B-trim: 114 in 2/52
Lambda= 0.121714
statistics sampled from 23691 (24071) to 23691 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.282), width: 16
Scan time: 6.290
The best scores are: opt bits E(85289)
NP_008913 (OMIM: 601527,613456) ALX homeobox prote ( 326) 2195 396.4 4.3e-110
XP_011537084 (OMIM: 601527,613456) PREDICTED: ALX ( 231) 1552 283.3 3.3e-76
NP_068745 (OMIM: 605420,609597,613451,615529) home ( 411) 782 148.4 2.5e-35
NP_006483 (OMIM: 136760,606014) homeobox protein a ( 343) 686 131.4 2.6e-30
NP_620689 (OMIM: 300004,300215,300382,300419,30835 ( 562) 397 80.9 7e-15
NP_001191328 (OMIM: 137600,180500,180550,601542,60 ( 271) 382 77.9 2.6e-14
NP_700476 (OMIM: 137600,180500,180550,601542,60422 ( 271) 382 77.9 2.6e-14
XP_011530329 (OMIM: 137600,180500,180550,601542,60 ( 271) 382 77.9 2.6e-14
NP_000316 (OMIM: 137600,180500,180550,601542,60422 ( 324) 382 78.0 2.9e-14
NP_700475 (OMIM: 137600,180500,180550,601542,60422 ( 317) 377 77.1 5.3e-14
NP_001191326 (OMIM: 137600,180500,180550,601542,60 ( 317) 377 77.1 5.3e-14
NP_001191327 (OMIM: 137600,180500,180550,601542,60 ( 317) 377 77.1 5.3e-14
NP_001263380 (OMIM: 606701) dorsal root ganglia ho ( 263) 356 73.4 6e-13
XP_016883326 (OMIM: 122000,148300,605020,614195) P ( 280) 349 72.2 1.5e-12
NP_001243201 (OMIM: 122000,148300,605020,614195) v ( 301) 345 71.5 2.5e-12
NP_055403 (OMIM: 122000,148300,605020,614195) visu ( 365) 345 71.6 2.9e-12
NP_002644 (OMIM: 119800,186550,602149) pituitary h ( 314) 344 71.3 2.9e-12
NP_001128726 (OMIM: 167410,268220) paired box prot ( 505) 346 71.9 3.2e-12
NP_039236 (OMIM: 167410,268220) paired box protein ( 518) 346 71.9 3.3e-12
NP_002575 (OMIM: 167410,268220) paired box protein ( 520) 346 71.9 3.3e-12
NP_005020 (OMIM: 107250,602669,610623) pituitary h ( 302) 342 71.0 3.6e-12
NP_878314 (OMIM: 142993,610092,610093) visual syst ( 361) 341 70.9 4.7e-12
NP_003915 (OMIM: 209880,603851,613013) paired meso ( 314) 328 68.5 2.1e-11
NP_852126 (OMIM: 122880,148820,193500,268220,60659 ( 403) 324 67.9 4e-11
NP_852125 (OMIM: 122880,148820,193500,268220,60659 ( 407) 324 67.9 4e-11
NP_005160 (OMIM: 602078,602753) paired mesoderm ho ( 284) 321 67.3 4.5e-11
NP_852122 (OMIM: 122880,148820,193500,268220,60659 ( 479) 324 68.0 4.5e-11
NP_001120838 (OMIM: 122880,148820,193500,268220,60 ( 483) 324 68.0 4.6e-11
NP_852123 (OMIM: 122880,148820,193500,268220,60659 ( 484) 324 68.0 4.6e-11
NP_852124 (OMIM: 122880,148820,193500,268220,60659 ( 505) 324 68.0 4.7e-11
NP_115485 (OMIM: 604529) homeobox protein orthoped ( 325) 320 67.1 5.6e-11
NP_006875 (OMIM: 602504) short stature homeobox pr ( 331) 320 67.1 5.7e-11
NP_001297089 (OMIM: 106210,120430,136520,148190,16 ( 286) 317 66.6 7.4e-11
NP_001297090 (OMIM: 106210,120430,136520,148190,16 ( 286) 317 66.6 7.4e-11
NP_038463 (OMIM: 601881,611038) retinal homeobox p ( 346) 317 66.6 8.4e-11
NP_003021 (OMIM: 602504) short stature homeobox pr ( 355) 317 66.6 8.6e-11
NP_001245394 (OMIM: 106210,120430,136520,148190,16 ( 422) 317 66.7 9.7e-11
NP_000271 (OMIM: 106210,120430,136520,148190,16555 ( 422) 317 66.7 9.7e-11
NP_001121084 (OMIM: 106210,120430,136520,148190,16 ( 422) 317 66.7 9.7e-11
NP_001245393 (OMIM: 106210,120430,136520,148190,16 ( 422) 317 66.7 9.7e-11
NP_008833 (OMIM: 167420,202650) paired mesoderm ho ( 217) 313 65.7 9.8e-11
NP_001595 (OMIM: 106210,120430,136520,148190,16555 ( 436) 317 66.7 9.9e-11
NP_001297087 (OMIM: 106210,120430,136520,148190,16 ( 436) 317 66.7 9.9e-11
NP_001245391 (OMIM: 106210,120430,136520,148190,16 ( 436) 317 66.7 9.9e-11
NP_001245392 (OMIM: 106210,120430,136520,148190,16 ( 436) 317 66.7 9.9e-11
XP_006711451 (OMIM: 167420,202650) PREDICTED: pair ( 198) 311 65.3 1.2e-10
NP_073207 (OMIM: 167420,202650) paired mesoderm ho ( 245) 311 65.4 1.4e-10
NP_001290437 (OMIM: 612019) intestine-specific hom ( 245) 309 65.1 1.7e-10
XP_016870292 (OMIM: 604675) PREDICTED: paired meso ( 193) 307 64.6 1.9e-10
NP_001297088 (OMIM: 106210,120430,136520,148190,16 ( 401) 311 65.6 1.9e-10
>>NP_008913 (OMIM: 601527,613456) ALX homeobox protein 1 (326 aa)
initn: 2195 init1: 2195 opt: 2195 Z-score: 2097.4 bits: 396.4 E(85289): 4.3e-110
Smith-Waterman score: 2195; 100.0% identity (100.0% similar) in 326 aa overlap (1-326:1-326)
10 20 30 40 50 60
pF1KB7 MEFLSEKFALKSPPSKNSDFYMGAGGPLEHVMETLDNESFYSKASAGKCVQAFGPLPRAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 MEFLSEKFALKSPPSKNSDFYMGAGGPLEHVMETLDNESFYSKASAGKCVQAFGPLPRAE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 HHVRLERTSPCQDSSVNYGITKVEGQPLHTELNRAMDNCNSLRMSPVKGMQEKGELDELG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 HHVRLERTSPCQDSSVNYGITKVEGQPLHTELNRAMDNCNSLRMSPVKGMQEKGELDELG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 DKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 DKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 QNRRAKWRKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 QNRRAKWRKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 LPRDTSSCMTPYSHSPRTDSSYTGFSNHQNQFSHVPLNNFFTDSLLTGATNGHAFETKPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 LPRDTSSCMTPYSHSPRTDSSYTGFSNHQNQFSHVPLNNFFTDSLLTGATNGHAFETKPE
250 260 270 280 290 300
310 320
pF1KB7 FERRSSSIAVLRMKAKEHTANISWAM
::::::::::::::::::::::::::
NP_008 FERRSSSIAVLRMKAKEHTANISWAM
310 320
>>XP_011537084 (OMIM: 601527,613456) PREDICTED: ALX home (231 aa)
initn: 1552 init1: 1552 opt: 1552 Z-score: 1489.2 bits: 283.3 E(85289): 3.3e-76
Smith-Waterman score: 1552; 100.0% identity (100.0% similar) in 231 aa overlap (96-326:1-231)
70 80 90 100 110 120
pF1KB7 ERTSPCQDSSVNYGITKVEGQPLHTELNRAMDNCNSLRMSPVKGMQEKGELDELGDKCDS
::::::::::::::::::::::::::::::
XP_011 MDNCNSLRMSPVKGMQEKGELDELGDKCDS
10 20 30
130 140 150 160 170 180
pF1KB7 NVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRA
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB7 KWRKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCMLPRDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KWRKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCMLPRDT
100 110 120 130 140 150
250 260 270 280 290 300
pF1KB7 SSCMTPYSHSPRTDSSYTGFSNHQNQFSHVPLNNFFTDSLLTGATNGHAFETKPEFERRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSCMTPYSHSPRTDSSYTGFSNHQNQFSHVPLNNFFTDSLLTGATNGHAFETKPEFERRS
160 170 180 190 200 210
310 320
pF1KB7 SSIAVLRMKAKEHTANISWAM
:::::::::::::::::::::
XP_011 SSIAVLRMKAKEHTANISWAM
220 230
>>NP_068745 (OMIM: 605420,609597,613451,615529) homeobox (411 aa)
initn: 697 init1: 579 opt: 782 Z-score: 755.2 bits: 148.4 E(85289): 2.5e-35
Smith-Waterman score: 782; 52.5% identity (78.6% similar) in 238 aa overlap (96-325:175-410)
70 80 90 100 110 120
pF1KB7 ERTSPCQDSSVNYGITKVEGQPLHTELNRAMDNCN-SLRMSPVKGMQEKGELDELG--DK
::. :.. . ::: :... : . .:
NP_068 GHSAALQVPCYAKESSLGEPELPPDSDTVGMDSSYLSVKEAGVKGPQDRASSDLPSPLEK
150 160 170 180 190 200
130 140 150 160 170 180
pF1KB7 CDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQN
::. ...::::.:::::: ::::::::::::::::::.:::::.::.::::::::::::
NP_068 ADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQN
210 220 230 240 250 260
190 200 210 220 230 240
pF1KB7 RRAKWRKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCMLP
::::::::::.::.::...::...:.. .: :...: :::: : :: ...: : .:..:
NP_068 RRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVP
270 280 290 300 310 320
250 260 270 280 290
pF1KB7 RD-TSSCMTPYSHSPRTD-SSYTGFSNHQNQFSHVP---LNNFFTDSLLTGATNGHAFET
: . .::.:..: : . :: : : . .. ::: ....: . :. . ::. ..
NP_068 CDPVPACMSPHAHPPGSGASSVTDFLSVSGAGSHVGQTHMGSLFGAASLSPGLNGYELNG
330 340 350 360 370 380
300 310 320
pF1KB7 KPEFERRSSSIAVLRMKAKEHTANISWAM
.: .:..::::.::::::::.: ::::
NP_068 EP--DRKTSSIAALRMKAKEHSAAISWAT
390 400 410
>>NP_006483 (OMIM: 136760,606014) homeobox protein arist (343 aa)
initn: 704 init1: 578 opt: 686 Z-score: 665.1 bits: 131.4 E(85289): 2.6e-30
Smith-Waterman score: 686; 52.9% identity (75.0% similar) in 208 aa overlap (119-324:140-341)
90 100 110 120 130 140
pF1KB7 HTELNRAMDNCNSLRMSPVKGMQEKGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELE
: :. . ..:::::.::::...::::::
NP_006 CRGGPRDGPSNLQGSPGPCLASLHLPLSPGLPDSMELAKNKSKKRRNRTTFSTFQLEELE
110 120 130 140 150 160
150 160 170 180 190 200
pF1KB7 KVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQAKSHFAATYD
::::::::::::.::::::::.::::::::::::::::::::::::.::.... :.:.::
NP_006 KVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWRKRERYGKIQEGRNPFTAAYD
170 180 190 200 210 220
210 220 230 240 250 260
pF1KB7 ISVLPRTDSYPQIQNNLWAGNASGGSVVTSCML-PRDTSS-CMTPYSHSPRTDSSYTGFS
:::::::::.::.::.:::. .:: : :.. :. : ::.:::: . ... :
NP_006 ISVLPRTDSHPQLQNSLWASPGSG-SPGGPCLVSPEGIPSPCMSPYSHPHGSVAGFMGVP
230 240 250 260 270 280
270 280 290 300 310 320
pF1KB7 NHQNQFSHVPLNNFFTDSLLTGATNGHAFETKPEFERRSSSIAVLRMKAKEHTANISWAM
. . . : .: .::.:: . . . .: :.. ::.: :: . ..:
NP_006 APSAAHPGIYSIHGFPPTL-----GGHSFEPSSDGDYKSPSLVSLRVKPKEPPGLLNWTT
290 300 310 320 330 340
>>NP_620689 (OMIM: 300004,300215,300382,300419,308350,30 (562 aa)
initn: 454 init1: 352 opt: 397 Z-score: 388.1 bits: 80.9 E(85289): 7e-15
Smith-Waterman score: 446; 39.1% identity (62.1% similar) in 235 aa overlap (120-323:316-547)
90 100 110 120 130 140
pF1KB7 TELNRAMDNCNSLRMSPVKGMQEKGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEK
:. . .. . :.::.:::::: ::::::.
NP_620 GGELSPKEELLLHPEDAEGKDGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELER
290 300 310 320 330 340
150 160 170 180 190 200
pF1KB7 VFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYG-QIQQAKSHF----A
.:::::::::..::.::.: .:::::::::::::::::::::. : : . : .
NP_620 AFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGAQTHPPGLPFPGPLS
350 360 370 380 390 400
210 220 230 240 250
pF1KB7 ATYDISVLPRTDSYP-----QIQNNLWAGNASGGSVVTSCMLPRDTSSCMTPYSHSPRTD
::. .: : :. : .. :.. :...... . : :. . : : .:
NP_620 ATHPLS--PYLDASPFPPHHPALDSAWTAAAAAAAAAFPSLPPPPGSASLPP-SGAPLGL
410 420 430 440 450 460
260 270 280 290 300
pF1KB7 SSYTGFS--NHQNQFSHVPLNNFFTDSLLTGATNGHAFETKPE-----------------
:.. : . : .: . : : . ::.:... :. .:
NP_620 STFLGAAVFRHPAFISPAFGRLFSTMAPLTSASTAAALLRQPTPAVEGAVASGALADPAT
470 480 490 500 510 520
310 320
pF1KB7 --FERRSSSIAVLRMKAKEHTANISWAM
.::.::::.::.:::::.:...
NP_620 AAADRRASSIAALRLKAKEHAAQLTQLNILPGTSTGKEVC
530 540 550 560
>>NP_001191328 (OMIM: 137600,180500,180550,601542,604229 (271 aa)
initn: 396 init1: 348 opt: 382 Z-score: 377.9 bits: 77.9 E(85289): 2.6e-14
Smith-Waterman score: 419; 35.7% identity (62.3% similar) in 244 aa overlap (98-320:4-247)
70 80 90 100 110 120
pF1KB7 TSPCQDSSVNYGITKVEGQPLHTELNRAMDNCNSLRMSPVKGMQEKGELDELGDKCDSNV
:: .: . :. ..:.. . : .
NP_001 METNCRKLVSACVQLEKDKSQQGKNEDVGAEDP
10 20 30
130 140 150 160 170 180
pF1KB7 SSSKK-RRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAK
:..:. ::.:: ::: ::.::: .::...:::. .::..:. :.::::::.:::.:::::
NP_001 SKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAK
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB7 WRKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCMLPRDTS
:::::: : . :. :. .. . : : :: . : ::... .. ... .: .:
NP_001 WRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPFFNS
100 110 120 130 140 150
250 260 270 280 290
pF1KB7 SCMTPYSHS-----PRTDSSYTGFSNH-QNQFSHVP---------LNNFFTDSLLTGATN
..: : . : . ::.. :. . . :: :::. . :: ... .
NP_001 MNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPT
160 170 180 190 200 210
300 310 320
pF1KB7 G---HAFETKPEFERRS--SSIAVLRMKAKEHTANISWAM
.: : : : . ::.: ::.:::.:..
NP_001 PACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPASNLSACQYAVDRPV
220 230 240 250 260 270
>>NP_700476 (OMIM: 137600,180500,180550,601542,604229) p (271 aa)
initn: 396 init1: 348 opt: 382 Z-score: 377.9 bits: 77.9 E(85289): 2.6e-14
Smith-Waterman score: 419; 35.7% identity (62.3% similar) in 244 aa overlap (98-320:4-247)
70 80 90 100 110 120
pF1KB7 TSPCQDSSVNYGITKVEGQPLHTELNRAMDNCNSLRMSPVKGMQEKGELDELGDKCDSNV
:: .: . :. ..:.. . : .
NP_700 METNCRKLVSACVQLEKDKSQQGKNEDVGAEDP
10 20 30
130 140 150 160 170 180
pF1KB7 SSSKK-RRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAK
:..:. ::.:: ::: ::.::: .::...:::. .::..:. :.::::::.:::.:::::
NP_700 SKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAK
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB7 WRKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCMLPRDTS
:::::: : . :. :. .. . : : :: . : ::... .. ... .: .:
NP_700 WRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPFFNS
100 110 120 130 140 150
250 260 270 280 290
pF1KB7 SCMTPYSHS-----PRTDSSYTGFSNH-QNQFSHVP---------LNNFFTDSLLTGATN
..: : . : . ::.. :. . . :: :::. . :: ... .
NP_700 MNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPT
160 170 180 190 200 210
300 310 320
pF1KB7 G---HAFETKPEFERRS--SSIAVLRMKAKEHTANISWAM
.: : : : . ::.: ::.:::.:..
NP_700 PACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPASNLSACQYAVDRPV
220 230 240 250 260 270
>>XP_011530329 (OMIM: 137600,180500,180550,601542,604229 (271 aa)
initn: 396 init1: 348 opt: 382 Z-score: 377.9 bits: 77.9 E(85289): 2.6e-14
Smith-Waterman score: 419; 35.7% identity (62.3% similar) in 244 aa overlap (98-320:4-247)
70 80 90 100 110 120
pF1KB7 TSPCQDSSVNYGITKVEGQPLHTELNRAMDNCNSLRMSPVKGMQEKGELDELGDKCDSNV
:: .: . :. ..:.. . : .
XP_011 METNCRKLVSACVQLEKDKSQQGKNEDVGAEDP
10 20 30
130 140 150 160 170 180
pF1KB7 SSSKK-RRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAK
:..:. ::.:: ::: ::.::: .::...:::. .::..:. :.::::::.:::.:::::
XP_011 SKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAK
40 50 60 70 80 90
190 200 210 220 230 240
pF1KB7 WRKRERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCMLPRDTS
:::::: : . :. :. .. . : : :: . : ::... .. ... .: .:
XP_011 WRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPFFNS
100 110 120 130 140 150
250 260 270 280 290
pF1KB7 SCMTPYSHS-----PRTDSSYTGFSNH-QNQFSHVP---------LNNFFTDSLLTGATN
..: : . : . ::.. :. . . :: :::. . :: ... .
XP_011 MNVNPLSSQSMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPT
160 170 180 190 200 210
300 310 320
pF1KB7 G---HAFETKPEFERRS--SSIAVLRMKAKEHTANISWAM
.: : : : . ::.: ::.:::.:..
XP_011 PACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPASNLSACQYAVDRPV
220 230 240 250 260 270
>>NP_000316 (OMIM: 137600,180500,180550,601542,604229) p (324 aa)
initn: 396 init1: 348 opt: 382 Z-score: 376.9 bits: 78.0 E(85289): 2.9e-14
Smith-Waterman score: 430; 33.6% identity (60.1% similar) in 301 aa overlap (49-320:3-300)
20 30 40 50 60 70
pF1KB7 DFYMGAGGPLEHVMETLDNESFYSKASAGKCVQAFGPLPRAEHHVRLERTSPCQDSSVNY
:.. ::: . ::.. . : ..:: ..
NP_000 MNCMK--GPL-HLEHRAAGTKLSAVSSSSCHH
10 20
80 90 100 110 120 130
pF1KB7 ----GITKV--EGQP--LHTELNRAMDNCNSLRMSPVKGMQEKGELDELGDKCDSNVSSS
....: ::: : . .: . : :: . ..:.. . : . :..
NP_000 PQPLAMASVLAPGQPRSLDSSKHRLEVHTISDTSSPEAAEKDKSQQGKNEDVGAEDPSKK
30 40 50 60 70 80
140 150 160 170 180
pF1KB7 KK-RRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRK
:. ::.:: ::: ::.::: .::...:::. .::..:. :.::::::.:::.::::::::
NP_000 KRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRK
90 100 110 120 130 140
190 200 210 220 230 240
pF1KB7 RERYGQIQQAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCMLPRDTSSCM
::: : . :. :. .. . : : :: . : ::... .. ... .: .: .
NP_000 RERNQQAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPFFNSMNV
150 160 170 180 190 200
250 260 270 280 290
pF1KB7 TPYSHS-----PRTDSSYTGFSNH-QNQFSHVP---------LNNFFTDSLLTGATNG--
.: : . : . ::.. :. . . :: :::. . :: ... .
NP_000 NPLSSQSMFSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPAC
210 220 230 240 250 260
300 310 320
pF1KB7 -HAFETKPEFERRS--SSIAVLRMKAKEHTANISWAM
.: : : : . ::.: ::.:::.:..
NP_000 PYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPASNLSACQYAVDRPV
270 280 290 300 310 320
>>NP_700475 (OMIM: 137600,180500,180550,601542,604229) p (317 aa)
initn: 396 init1: 348 opt: 377 Z-score: 372.3 bits: 77.1 E(85289): 5.3e-14
Smith-Waterman score: 414; 35.6% identity (63.9% similar) in 233 aa overlap (108-320:63-293)
80 90 100 110 120 130
pF1KB7 YGITKVEGQPLHTELNRAMDNCNSLRMSPVKGMQEKGELDELGDKCDSNVSSSKKRRHRT
: ...:. ...: . :. ....::.::
NP_700 KKVEFTDSPESRKEAASSKFFPRQHPGANEKDKSQQGKNEDVGAEDPSK--KKRQRRQRT
40 50 60 70 80 90
140 150 160 170 180 190
pF1KB7 TFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQ
::: ::.::: .::...:::. .::..:. :.::::::.:::.::::::::::: : .
NP_700 HFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAE
100 110 120 130 140 150
200 210 220 230 240 250
pF1KB7 QAKSHFAATYDISVLPRTDSYPQIQNNLWAGNASGGSVVTSCMLPRDTSSCMTPYSHS--
:. :. .. . : : :: . : ::... .. ... .: .: ..: : .
NP_700 LCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQSM
160 170 180 190 200 210
260 270 280 290
pF1KB7 ---PRTDSSYTGFSNH-QNQFSHVP---------LNNFFTDSLLTGATNG---HAFETKP
: . ::.. :. . . :: :::. . :: ... . .: : :
NP_700 FSPPNSISSMSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPP
220 230 240 250 260 270
300 310 320
pF1KB7 EFERRS--SSIAVLRMKAKEHTANISWAM
: . ::.: ::.:::.:..
NP_700 YVYRDTCNSSLASLRLKAKQHSSFGYASVQNPASNLSACQYAVDRPV
280 290 300 310
326 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:48:01 2016 done: Sun Nov 6 05:48:03 2016
Total Scan time: 6.290 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]