FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1655, 171 aa 1>>>pF1KE1655 171 - 171 aa - 171 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6401+/-0.000375; mu= 10.7792+/- 0.023 mean_var=66.3129+/-13.289, 0's: 0 Z-trim(112.4): 22 B-trim: 53 in 1/51 Lambda= 0.157498 statistics sampled from 21269 (21277) to 21269 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.249), width: 16 Scan time: 5.180 The best scores are: opt bits E(85289) NP_060872 (OMIM: 605679) interleukin-26 precursor ( 171) 1111 261.1 6.4e-70 NP_000563 (OMIM: 124092,180300,609423,614395) inte ( 178) 189 51.6 7.7e-07 >>NP_060872 (OMIM: 605679) interleukin-26 precursor [Hom (171 aa) initn: 1111 init1: 1111 opt: 1111 Z-score: 1376.3 bits: 261.1 E(85289): 6.4e-70 Smith-Waterman score: 1111; 100.0% identity (100.0% similar) in 171 aa overlap (1-171:1-171) 10 20 30 40 50 60 pF1KE1 MLVNFILRCGLLLVTLSLAIAKHKQSSFTKSCYPRGTLSQAVDALYIKAAWLKATIPEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MLVNFILRCGLLLVTLSLAIAKHKQSSFTKSCYPRGTLSQAVDALYIKAAWLKATIPEDR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 IKNIRLLKKKTKKQFMKNCQFQEQLLSFFMEDVFGQLQLQGCKKIRFVEDFHSLRQKLSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 IKNIRLLKKKTKKQFMKNCQFQEQLLSFFMEDVFGQLQLQGCKKIRFVEDFHSLRQKLSH 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 CISCASSAREMKSITRMKRIFYRIGNKGIYKAISELDILLSWIKKLLESSQ ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 CISCASSAREMKSITRMKRIFYRIGNKGIYKAISELDILLSWIKKLLESSQ 130 140 150 160 170 >>NP_000563 (OMIM: 124092,180300,609423,614395) interleu (178 aa) initn: 92 init1: 78 opt: 189 Z-score: 243.8 bits: 51.6 E(85289): 7.7e-07 Smith-Waterman score: 189; 26.0% identity (60.4% similar) in 169 aa overlap (6-167:6-172) 10 20 30 40 50 pF1KE1 MLVNFILRCGLLLVTLSLAIAKHKQSSFTKSCYPRGTLSQAVDALYIKAAWLKATIP-ED .: : .::. . . .. :: . . .: :.: . . : . .:. . .: NP_000 MHSSALLCCLVLLTGVRASPGQGTQSENSCTHFP-GNLPNMLRDLRDAFSRVKTFFQMKD 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 RIKNIRLLKKKTKKQF--MKNCQFQEQLLSFFMEDVFGQLQLQGCKKIRFV----EDFHS .. :. :::.. ..: . .:: ....:..:.:. : . : : :.... NP_000 QLDNL-LLKESLLEDFKGYLGCQALSEMIQFYLEEVMPQAENQDPDIKAHVNSLGENLKT 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 LRQKLSHCISCASSAREMKSITRMKRIFYRIGNKGIYKAISELDILLSWIKKLLESSQ :: .: .: . :.. ..: : .. .::::::.::.::....:. . NP_000 LRLRLRRCHRFLPCENKSKAVEQVKNAFNKLQEKGIYKAMSEFDIFINYIEAYMTMKIRN 120 130 140 150 160 170 171 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:30:17 2016 done: Sat Nov 5 22:30:17 2016 Total Scan time: 5.180 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]