FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3083, 244 aa 1>>>pF1KE3083 244 - 244 aa - 244 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6139+/-0.000565; mu= 18.3866+/- 0.034 mean_var=58.7754+/-11.445, 0's: 0 Z-trim(112.2): 24 B-trim: 0 in 0/52 Lambda= 0.167293 statistics sampled from 13008 (13026) to 13008 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.4), width: 16 Scan time: 2.190 The best scores are: opt bits E(32554) CCDS8887.2 METTL7B gene_id:196410|Hs108|chr12 ( 244) 1720 422.6 1.2e-118 CCDS8804.1 METTL7A gene_id:25840|Hs108|chr12 ( 244) 1057 262.6 1.8e-70 >>CCDS8887.2 METTL7B gene_id:196410|Hs108|chr12 (244 aa) initn: 1720 init1: 1720 opt: 1720 Z-score: 2243.6 bits: 422.6 E(32554): 1.2e-118 Smith-Waterman score: 1720; 100.0% identity (100.0% similar) in 244 aa overlap (1-244:1-244) 10 20 30 40 50 60 pF1KE3 MDILVPLLQLLVLLLTLPLHLMALLGCWQPLCKSYFPYLMAVLTPKSNRKMESKKRELFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS88 MDILVPLLQLLVLLLTLPLHLMALLGCWQPLCKSYFPYLMAVLTPKSNRKMESKKRELFS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 QIKGLTGASGKVALLELGCGTGANFQFYPPGCRVTCLDPNPHFEKFLTKSMAENRHLQYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS88 QIKGLTGASGKVALLELGCGTGANFQFYPPGCRVTCLDPNPHFEKFLTKSMAENRHLQYE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RFVVAPGEDMRQLADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGVLFFWEHVAEPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS88 RFVVAPGEDMRQLADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGVLFFWEHVAEPY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GSWAFMWQQVFEPTWKHIGDGCCLTRETWKDLENAQFSEIQMERQPPPLKWLPVGPHIMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS88 GSWAFMWQQVFEPTWKHIGDGCCLTRETWKDLENAQFSEIQMERQPPPLKWLPVGPHIMG 190 200 210 220 230 240 pF1KE3 KAVK :::: CCDS88 KAVK >>CCDS8804.1 METTL7A gene_id:25840|Hs108|chr12 (244 aa) initn: 1057 init1: 1057 opt: 1057 Z-score: 1378.8 bits: 262.6 E(32554): 1.8e-70 Smith-Waterman score: 1057; 58.6% identity (85.7% similar) in 244 aa overlap (1-244:1-244) 10 20 30 40 50 60 pF1KE3 MDILVPLLQLLVLLLTLPLHLMALLGCWQPLCKSYFPYLMAVLTPKSNRKMESKKRELFS :.. . .:.: . .::.::.:. .:: :. .::..:::... .: :..: :::::::: CCDS88 MELTIFILRLAIYILTFPLYLLNFLGLWSWICKKWFPYFLVRFTVIYNEQMASKKRELFS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 QIKGLTGASGKVALLELGCGTGANFQFYPPGCRVTCLDPNPHFEKFLTKSMAENRHLQYE ... ..: :::..:::.::::::::.::::::::::.::::.::::: ::.:::::::.: CCDS88 NLQEFAGPSGKLSLLEVGCGTGANFKFYPPGCRVTCIDPNPNFEKFLIKSIAENRHLQFE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RFVVAPGEDMRQLADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGVLFFWEHVAEPY ::::: ::.:.:.::::.::::::::::::.. ...:.:: :::::::...: :::: CCDS88 RFVVAAGENMHQVADGSVDVVVCTLVLCSVKNQERILREVCRVLRPGGAFYFMEHVAAEC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GSWAFMWQQVFEPTWKHIGDGCCLTRETWKDLENAQFSEIQMERQPPPLKWLPVGPHIMG ..: ..::::..:.:. . ::: ::::.:: :: :.::...... ::.: : :::.: CCDS88 STWNYFWQQVLDPAWHLLFDGCNLTRESWKALERASFSKLKLQHIQAPLSWELVRPHIYG 190 200 210 220 230 240 pF1KE3 KAVK ::: CCDS88 YAVK 244 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 03:12:01 2016 done: Sun Nov 6 03:12:02 2016 Total Scan time: 2.190 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]