FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1626, 142 aa 1>>>pF1KE1626 142 - 142 aa - 142 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1492+/-0.000357; mu= 11.9093+/- 0.022 mean_var=56.3837+/-11.644, 0's: 0 Z-trim(113.4): 36 B-trim: 0 in 0/53 Lambda= 0.170804 statistics sampled from 22725 (22758) to 22725 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.267), width: 16 Scan time: 4.710 The best scores are: opt bits E(85289) NP_002280 (OMIM: 149750) alpha-lactalbumin precurs ( 142) 979 249.1 1.8e-66 XP_006719458 (OMIM: 149750) PREDICTED: alpha-lacta ( 149) 979 249.1 1.9e-66 NP_000230 (OMIM: 105200,153450) lysozyme C precurs ( 148) 337 90.9 7.9e-19 NP_898881 (OMIM: 612748) lysozyme-like protein 2 [ ( 194) 323 87.5 1.1e-17 NP_776246 (OMIM: 612749) sperm acrosome membrane-a ( 215) 321 87.0 1.7e-17 XP_016885001 (OMIM: 300593) PREDICTED: sperm acros ( 159) 294 80.3 1.3e-15 NP_995328 (OMIM: 300593) sperm acrosome-associated ( 159) 294 80.3 1.3e-15 NP_065159 (OMIM: 612751) lysozyme-like protein 6 p ( 148) 284 77.8 6.8e-15 NP_001186880 (OMIM: 612751) lysozyme-like protein ( 148) 284 77.8 6.8e-15 NP_001304154 (OMIM: 612749) sperm acrosome membran ( 123) 235 65.7 2.5e-11 NP_001304155 (OMIM: 612749) sperm acrosome membran ( 112) 231 64.7 4.5e-11 XP_016861195 (OMIM: 612750) PREDICTED: lysozyme-li ( 146) 227 63.8 1.1e-10 NP_653235 (OMIM: 612750) lysozyme-like protein 4 p ( 146) 227 63.8 1.1e-10 XP_016861194 (OMIM: 612750) PREDICTED: lysozyme-li ( 146) 227 63.8 1.1e-10 NP_001291315 (OMIM: 612750) lysozyme-like protein ( 146) 227 63.8 1.1e-10 XP_011517609 (OMIM: 612748) PREDICTED: lysozyme-li ( 163) 208 59.1 3.2e-09 XP_011517608 (OMIM: 612748) PREDICTED: lysozyme-li ( 181) 207 58.9 4.2e-09 XP_011531657 (OMIM: 612750) PREDICTED: lysozyme-li ( 146) 202 57.6 8.1e-09 >>NP_002280 (OMIM: 149750) alpha-lactalbumin precursor [ (142 aa) initn: 979 init1: 979 opt: 979 Z-score: 1314.2 bits: 249.1 E(85289): 1.8e-66 Smith-Waterman score: 979; 100.0% identity (100.0% similar) in 142 aa overlap (1-142:1-142) 10 20 30 40 50 60 pF1KE1 MRFFVPLFLVGILFPAILAKQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MRFFVPLFLVGILFPAILAKQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VENNESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDIKGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 VENNESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDIKGI 70 80 90 100 110 120 130 140 pF1KE1 DYWLAHKALCTEKLEQWLCEKL :::::::::::::::::::::: NP_002 DYWLAHKALCTEKLEQWLCEKL 130 140 >>XP_006719458 (OMIM: 149750) PREDICTED: alpha-lactalbum (149 aa) initn: 979 init1: 979 opt: 979 Z-score: 1313.9 bits: 249.1 E(85289): 1.9e-66 Smith-Waterman score: 979; 100.0% identity (100.0% similar) in 142 aa overlap (1-142:8-149) 10 20 30 40 50 pF1KE1 MRFFVPLFLVGILFPAILAKQFTKCELSQLLKDIDGYGGIALPELICTMFHTS ::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MFLGVAKMRFFVPLFLVGILFPAILAKQFTKCELSQLLKDIDGYGGIALPELICTMFHTS 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 GYDTQAIVENNESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GYDTQAIVENNESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKK 70 80 90 100 110 120 120 130 140 pF1KE1 ILDIKGIDYWLAHKALCTEKLEQWLCEKL ::::::::::::::::::::::::::::: XP_006 ILDIKGIDYWLAHKALCTEKLEQWLCEKL 130 140 >>NP_000230 (OMIM: 105200,153450) lysozyme C precursor [ (148 aa) initn: 288 init1: 189 opt: 337 Z-score: 459.0 bits: 90.9 E(85289): 7.9e-19 Smith-Waterman score: 337; 37.7% identity (69.6% similar) in 138 aa overlap (1-133:1-137) 10 20 30 40 50 pF1KE1 MRFFVPLFLVGILFPAILAKQFTKCELSQLLK--DIDGYGGIALPELICTMFHTSGYDTQ :. .. : :: .: .. .: : .:::.. :: .::: ::.: . .: :::.:. NP_000 MKALIVLGLV-LLSVTVQGKVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTR 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 AIVEN--NESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKIL- : : ..::.::.:::... ::.....: . : : .::. .:.:.:.: . :::... NP_000 ATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVR 60 70 80 90 100 110 120 130 140 pF1KE1 DIKGIDYWLAHKALCTEKLEQWLCEKL : .:: :.: . : .. NP_000 DPQGIRAWVAWRNRCQNRDVRQYVQGCGV 120 130 140 >>NP_898881 (OMIM: 612748) lysozyme-like protein 2 [Homo (194 aa) initn: 129 init1: 116 opt: 323 Z-score: 438.5 bits: 87.5 E(85289): 1.1e-17 Smith-Waterman score: 323; 35.5% identity (68.1% similar) in 141 aa overlap (7-140:53-192) 10 20 30 pF1KE1 MRFFVPLFLVGILFPAILAKQFTKCELSQLLK--DI : :.: : . .: .:.:.:..... . NP_898 TEKSASAAGTRNLPFQFCLRQALRMKAAGILTLIGCLVTGAESKIYTRCKLAKIFSRAGL 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE1 DGYGGIALPELICTMFHTSGYDTQA-IVENNESTEYGLFQISNKLWCKSSQVPQSRNICD :.: :..: . :: .. :::.: : : .. : .::.:::.. ::. ... .. : : NP_898 DNYWGFSLGNWICMAYYESGYNTTAQTVLDDGSIDYGIFQINSFAWCRRGKLKEN-NHCH 90 100 110 120 130 140 100 110 120 130 140 pF1KE1 ISCDKFLDDDITDDIMCAKKIL-DIKGIDYWLAHKALCTEK-LEQWL--CEKL ..:. .. ::.:: :.:::::. . .:..:: . : : . : .: :: NP_898 VACSALVTDDLTDAIICAKKIVKETQGMNYWQGWKKHCEGRDLSDWKKDCEVS 150 160 170 180 190 >>NP_776246 (OMIM: 612749) sperm acrosome membrane-assoc (215 aa) initn: 189 init1: 149 opt: 321 Z-score: 435.1 bits: 87.0 E(85289): 1.7e-17 Smith-Waterman score: 321; 35.3% identity (66.9% similar) in 139 aa overlap (9-140:77-214) 10 20 30 pF1KE1 MRFFVPLFLVGILFPAILAKQFTKCELSQLLKD--IDG :.. :.:. :: . .:::...:.: .:: NP_776 STSAAGIEARSRALRRRWCPAGIMLLALVCLLSCLLPSSEAKLYGRCELARVLHDFGLDG 50 60 70 80 90 100 40 50 60 70 80 90 pF1KE1 YGGIALPELICTMFHTSGYDTQAI-VENNESTEYGLFQISNKLWCKSSQVPQSRNICDIS : : .: . .: . :::... :. : . ::. :.:::... :: :. .:. :.: . NP_776 YRGYSLADWVCLAYFTSGFNAAALDYEADGSTNNGIFQINSRRWC-SNLTPNVPNVCRMY 110 120 130 140 150 160 100 110 120 130 140 pF1KE1 CDKFLDDDITDDIMCAKKIL-DIKGIDYWLAHKALCTEK-LEQWL--CEKL :. .:. .. : ..:: :: . .:. :: : . : : : .:. :. NP_776 CSDLLNPNLKDTVICAMKITQEPQGLGYWEAWRHHCQGKDLTEWVDGCDF 170 180 190 200 210 >>XP_016885001 (OMIM: 300593) PREDICTED: sperm acrosome- (159 aa) initn: 260 init1: 160 opt: 294 Z-score: 401.2 bits: 80.3 E(85289): 1.3e-15 Smith-Waterman score: 294; 32.6% identity (66.0% similar) in 144 aa overlap (5-140:7-148) 10 20 30 40 50 pF1KE1 MRFFVPLFLVGILFPAILAKQFTKCELSQLLK--DIDGYGGIALPELICTMFHTSGYD : . :. .. .. :: . .:::. :. ..:: : .. . .: . ::.: XP_016 MKAWGTVVVTLATLMVVTVDAKIYERCELAARLERAGLNGYKGYGVGDWLCMAHYESGFD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 TQAIVENNE--STEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKI : :.:..: :.:::.::... :: .. .: ..:.: ..: .:. : ::: :::.: XP_016 T-AFVDHNPDGSSEYGIFQLNSAWWCDNGITP-TKNLCHMDCHDLLNRHILDDIRCAKQI 70 80 90 100 110 120 130 140 pF1KE1 LDIK-GIDYWLAHKALCT-EKLEQWL--CEKL .. . :.. : . . :. . : .:: :. XP_016 VSSQNGLSAWTSWRLHCSGHDLSEWLKGCDMHVKIDPKIHP 120 130 140 150 >>NP_995328 (OMIM: 300593) sperm acrosome-associated pro (159 aa) initn: 260 init1: 160 opt: 294 Z-score: 401.2 bits: 80.3 E(85289): 1.3e-15 Smith-Waterman score: 294; 32.6% identity (66.0% similar) in 144 aa overlap (5-140:7-148) 10 20 30 40 50 pF1KE1 MRFFVPLFLVGILFPAILAKQFTKCELSQLLK--DIDGYGGIALPELICTMFHTSGYD : . :. .. .. :: . .:::. :. ..:: : .. . .: . ::.: NP_995 MKAWGTVVVTLATLMVVTVDAKIYERCELAARLERAGLNGYKGYGVGDWLCMAHYESGFD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 TQAIVENNE--STEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKI : :.:..: :.:::.::... :: .. .: ..:.: ..: .:. : ::: :::.: NP_995 T-AFVDHNPDGSSEYGIFQLNSAWWCDNGITP-TKNLCHMDCHDLLNRHILDDIRCAKQI 70 80 90 100 110 120 130 140 pF1KE1 LDIK-GIDYWLAHKALCT-EKLEQWL--CEKL .. . :.. : . . :. . : .:: :. NP_995 VSSQNGLSAWTSWRLHCSGHDLSEWLKGCDMHVKIDPKIHP 120 130 140 150 >>NP_065159 (OMIM: 612751) lysozyme-like protein 6 precu (148 aa) initn: 108 init1: 75 opt: 284 Z-score: 388.4 bits: 77.8 E(85289): 6.8e-15 Smith-Waterman score: 284; 31.4% identity (66.4% similar) in 137 aa overlap (7-138:7-142) 10 20 30 40 50 pF1KE1 MRFFVPLFLVGILFPAILAKQFTKCELSQLLK--DIDGYGGIALPELICTMFHTSGYDTQ ..::. .. :. ...:.:.:.:. :.::. : .: . .: : : .. . NP_065 MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 AIVENNE-STEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILD- : :: . : .::::::... ::.. . :.:.: ..:. .:. .. : :::.:.. NP_065 KINENADGSFDYGLFQINSHYWCNDYK-SYSENLCHVDCQDLLNPNLLAGIHCAKRIVSG 70 80 90 100 110 120 130 140 pF1KE1 IKGIDYWLAHKALCTEK-LEQWLCEKL .:.. :. . :. . : :: NP_065 ARGMNNWVEWRLHCSGRPLFYWLTGCRLR 120 130 140 >>NP_001186880 (OMIM: 612751) lysozyme-like protein 6 pr (148 aa) initn: 108 init1: 75 opt: 284 Z-score: 388.4 bits: 77.8 E(85289): 6.8e-15 Smith-Waterman score: 284; 31.4% identity (66.4% similar) in 137 aa overlap (7-138:7-142) 10 20 30 40 50 pF1KE1 MRFFVPLFLVGILFPAILAKQFTKCELSQLLK--DIDGYGGIALPELICTMFHTSGYDTQ ..::. .. :. ...:.:.:.:. :.::. : .: . .: : : .. . NP_001 MTKALLIYLVSSFLALNQASLISRCDLAQVLQLEDLDGFEGYSLSDWLCLAFVESKFNIS 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 AIVENNE-STEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILD- : :: . : .::::::... ::.. . :.:.: ..:. .:. .. : :::.:.. NP_001 KINENADGSFDYGLFQINSHYWCNDYK-SYSENLCHVDCQDLLNPNLLAGIHCAKRIVSG 70 80 90 100 110 120 130 140 pF1KE1 IKGIDYWLAHKALCTEK-LEQWLCEKL .:.. :. . :. . : :: NP_001 ARGMNNWVEWRLHCSGRPLFYWLTGCRLR 120 130 140 >>NP_001304154 (OMIM: 612749) sperm acrosome membrane-as (123 aa) initn: 143 init1: 84 opt: 235 Z-score: 324.4 bits: 65.7 E(85289): 2.5e-11 Smith-Waterman score: 235; 34.9% identity (64.2% similar) in 106 aa overlap (41-140:18-122) 20 30 40 50 60 pF1KE1 GILFPAILAKQFTKCELSQLLKDIDGYGGIALPEL-ICTMFHTSGYDTQAI-VENNESTE ::: .: . :::... :. : . ::. NP_001 MTSGWTDTGDTAWLTAYALPYAGVCLAYFTSGFNAAALDYEADGSTN 10 20 30 40 70 80 90 100 110 120 pF1KE1 YGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKIL-DIKGIDYWLAHK :.:::... :: :. .:. :.: . :. .:. .. : ..:: :: . .:. :: : . NP_001 NGIFQINSRRWC-SNLTPNVPNVCRMYCSDLLNPNLKDTVICAMKITQEPQGLGYWEAWR 50 60 70 80 90 100 130 140 pF1KE1 ALCTEK-LEQWL--CEKL : : : .:. :. NP_001 HHCQGKDLTEWVDGCDF 110 120 142 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:52:32 2016 done: Sun Nov 6 14:52:33 2016 Total Scan time: 4.710 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]