FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3974, 288 aa 1>>>pF1KE3974 288 - 288 aa - 288 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3032+/-0.0012; mu= 9.5888+/- 0.071 mean_var=122.6290+/-25.599, 0's: 0 Z-trim(105.0): 224 B-trim: 0 in 0/47 Lambda= 0.115818 statistics sampled from 7915 (8178) to 7915 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.629), E-opt: 0.2 (0.251), width: 16 Scan time: 2.130 The best scores are: opt bits E(32554) CCDS8761.1 ASB8 gene_id:140461|Hs108|chr12 ( 288) 1897 328.6 3.3e-90 CCDS81686.1 ASB8 gene_id:140461|Hs108|chr12 ( 85) 525 98.8 1.4e-21 >>CCDS8761.1 ASB8 gene_id:140461|Hs108|chr12 (288 aa) initn: 1897 init1: 1897 opt: 1897 Z-score: 1732.9 bits: 328.6 E(32554): 3.3e-90 Smith-Waterman score: 1897; 100.0% identity (100.0% similar) in 288 aa overlap (1-288:1-288) 10 20 30 40 50 60 pF1KE3 MSSSMWYIMQSIQSKYSLSERLIRTIAAIRSFPHDNVEDLIRGGADVNCTHGTLKPLHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 MSSSMWYIMQSIQSKYSLSERLIRTIAAIRSFPHDNVEDLIRGGADVNCTHGTLKPLHCA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 CMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEKDEACVEVLLEYGANPNALDGNRDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 CMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEKDEACVEVLLEYGANPNALDGNRDT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 PLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 PLHWAAFKNNAECVRALLESGASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 NLIGQTPISRLVALLVRGLGTEKEDSCFELLHRAVGHFELRKNGTMPREVARDPQLCEKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 NLIGQTPISRLVALLVRGLGTEKEDSCFELLHRAVGHFELRKNGTMPREVARDPQLCEKL 190 200 210 220 230 240 250 260 270 280 pF1KE3 TVLCSAPGTLKTLARYAVRRSLGLQYLPDAVKGLPLPASLKEYLLLLE :::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 TVLCSAPGTLKTLARYAVRRSLGLQYLPDAVKGLPLPASLKEYLLLLE 250 260 270 280 >>CCDS81686.1 ASB8 gene_id:140461|Hs108|chr12 (85 aa) initn: 525 init1: 525 opt: 525 Z-score: 500.9 bits: 98.8 E(32554): 1.4e-21 Smith-Waterman score: 525; 100.0% identity (100.0% similar) in 78 aa overlap (1-78:1-78) 10 20 30 40 50 60 pF1KE3 MSSSMWYIMQSIQSKYSLSERLIRTIAAIRSFPHDNVEDLIRGGADVNCTHGTLKPLHCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MSSSMWYIMQSIQSKYSLSERLIRTIAAIRSFPHDNVEDLIRGGADVNCTHGTLKPLHCA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 CMVSDADCVELLLEKGAEVNALDGYNRTALHYAAEKDEACVEVLLEYGANPNALDGNRDT :::::::::::::::::: CCDS81 CMVSDADCVELLLEKGAEDSLGVAC 70 80 288 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:26:32 2016 done: Sun Nov 6 08:26:33 2016 Total Scan time: 2.130 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]