FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1922, 434 aa 1>>>pF1KE1922 434 - 434 aa - 434 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.5022+/-0.000895; mu= 4.1476+/- 0.054 mean_var=183.6410+/-36.922, 0's: 0 Z-trim(112.7): 28 B-trim: 174 in 1/51 Lambda= 0.094643 statistics sampled from 13443 (13461) to 13443 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.754), E-opt: 0.2 (0.413), width: 16 Scan time: 3.440 The best scores are: opt bits E(32554) CCDS44860.1 PPHLN1 gene_id:51535|Hs108|chr12 ( 434) 2896 407.4 1.4e-113 CCDS31777.1 PPHLN1 gene_id:51535|Hs108|chr12 ( 458) 1981 282.5 5.8e-76 CCDS55817.1 PPHLN1 gene_id:51535|Hs108|chr12 ( 319) 1903 271.8 7e-73 CCDS8741.1 PPHLN1 gene_id:51535|Hs108|chr12 ( 367) 1744 250.1 2.7e-66 CCDS41773.1 PPHLN1 gene_id:51535|Hs108|chr12 ( 374) 1744 250.1 2.7e-66 CCDS44861.1 PPHLN1 gene_id:51535|Hs108|chr12 ( 348) 1018 151.0 1.8e-36 >>CCDS44860.1 PPHLN1 gene_id:51535|Hs108|chr12 (434 aa) initn: 2896 init1: 2896 opt: 2896 Z-score: 2152.8 bits: 407.4 E(32554): 1.4e-113 Smith-Waterman score: 2896; 99.8% identity (99.8% similar) in 434 aa overlap (1-434:1-434) 10 20 30 40 50 60 pF1KE1 MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIESAGQTWQQVPPVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIESAGQTWQQVPPVR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 NTEMDHDGTPENEGEETAQSALFGFQHDASNHTIVGLGPNPVPEMKETTLQAPQPPQAPQ :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: CCDS44 NTEMDHDGTPENEGEETAQSALFGFQHDASNHTIVGLGPNQVPEMKETTLQAPQPPQAPQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 PLQPRKKRVRRTTQLRRTTGAPDITWGMLKKTTQEAERILLRTQTPFTPENLFLAMLSVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 PLQPRKKRVRRTTQLRRTTGAPDITWGMLKKTTQEAERILLRTQTPFTPENLFLAMLSVV 370 380 390 400 410 420 430 pF1KE1 HCNSRKDVKPENKQ :::::::::::::: CCDS44 HCNSRKDVKPENKQ 430 >>CCDS31777.1 PPHLN1 gene_id:51535|Hs108|chr12 (458 aa) initn: 2014 init1: 1967 opt: 1981 Z-score: 1477.2 bits: 282.5 E(32554): 5.8e-76 Smith-Waterman score: 2465; 88.9% identity (90.8% similar) in 434 aa overlap (2-434:61-458) 10 20 30 pF1KE1 MWSEGR-YEYERIPRERAPPRSHPSDESGYR ..::: . ..: . .:: : .:::::: CCDS31 VNIVPKKPPLLDRPGEGSYNRYYSHVDYRDYDEGRSFSHDR---RSGPP--HRGDESGYR 40 50 60 70 80 40 50 60 70 80 90 pF1KE1 WTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 WTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRS 90 100 110 120 130 140 100 110 120 130 140 150 pF1KE1 GSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 GSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS 150 160 170 180 190 200 160 170 180 190 200 210 pF1KE1 PSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 PSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT 210 220 230 240 250 260 220 230 240 250 260 270 pF1KE1 DQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 DQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPS 270 280 290 300 310 320 280 290 300 310 320 330 pF1KE1 LEKSIQFALRQNLHEIESAGQTWQQVPPVRNTEMDHDGTPENEGEETAQSALFGFQHDAS ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LEKSIQFALRQNLHEIESAGQTWQQVPPVRNTEMDHDGTPENEGEETAQSA--------- 330 340 350 360 370 340 350 360 370 380 390 pF1KE1 NHTIVGLGPNPVPEMKETTLQAPQPPQAPQPLQPRKKRVRRTTQLRRTTGAPDITWGMLK :::::::::::::::::::::::::::::::::::::: CCDS31 ----------------------PQPPQAPQPLQPRKKRVRRTTQLRRTTGAPDITWGMLK 380 390 400 410 400 410 420 430 pF1KE1 KTTQEAERILLRTQTPFTPENLFLAMLSVVHCNSRKDVKPENKQ :::::::::::::::::::::::::::::::::::::::::::: CCDS31 KTTQEAERILLRTQTPFTPENLFLAMLSVVHCNSRKDVKPENKQ 420 430 440 450 >>CCDS55817.1 PPHLN1 gene_id:51535|Hs108|chr12 (319 aa) initn: 1898 init1: 1898 opt: 1903 Z-score: 1421.9 bits: 271.8 E(32554): 7e-73 Smith-Waterman score: 1903; 92.4% identity (95.6% similar) in 315 aa overlap (1-315:8-317) 10 20 30 40 50 pF1KE1 MWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRR ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 MAYRRDEMWSEGRYEYERIPRERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRR 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 KSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 KSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQ 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 HRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 HRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKE 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 LAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 LAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLT 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE1 TRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIESAGQTW ::::::::::::::::::::::::::::::::::::::::::::::::::::: :. CCDS55 TRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI---GE-- 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 QQVPPVRNTEMDHDGTPENEGEETAQSALFGFQHDASNHTIVGLGPNPVPEMKETTLQAP . : ... ..: . .. :: CCDS55 RCVEELKHFIAEYDTSTQDFGEPF 300 310 >>CCDS8741.1 PPHLN1 gene_id:51535|Hs108|chr12 (367 aa) initn: 1725 init1: 1725 opt: 1744 Z-score: 1303.7 bits: 250.1 E(32554): 2.7e-66 Smith-Waterman score: 1744; 87.0% identity (92.7% similar) in 315 aa overlap (2-315:61-365) 10 20 30 pF1KE1 MWSEGR-YEYERIPRERAPPRSHPSDESGYR ..::: . ..: . .:: : .:::::: CCDS87 VNIVPKKPPLLDRPGEGSYNRYYSHVDYRDYDEGRSFSHDR---RSGPP--HRGDESGYR 40 50 60 70 80 40 50 60 70 80 90 pF1KE1 WTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 WTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRS 90 100 110 120 130 140 100 110 120 130 140 150 pF1KE1 GSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 GSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS 150 160 170 180 190 200 160 170 180 190 200 210 pF1KE1 PSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 PSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT 210 220 230 240 250 260 220 230 240 250 260 270 pF1KE1 DQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 DQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPS 270 280 290 300 310 320 280 290 300 310 320 330 pF1KE1 LEKSIQFALRQNLHEIESAGQTWQQVPPVRNTEMDHDGTPENEGEETAQSALFGFQHDAS :::::::::::::::: :. . : ... ..: . .. :: CCDS87 LEKSIQFALRQNLHEI---GE--RCVEELKHFIAEYDTSTQDFGEPF 330 340 350 360 340 350 360 370 380 390 pF1KE1 NHTIVGLGPNPVPEMKETTLQAPQPPQAPQPLQPRKKRVRRTTQLRRTTGAPDITWGMLK >>CCDS41773.1 PPHLN1 gene_id:51535|Hs108|chr12 (374 aa) initn: 1725 init1: 1725 opt: 1744 Z-score: 1303.6 bits: 250.1 E(32554): 2.7e-66 Smith-Waterman score: 1744; 87.0% identity (92.7% similar) in 315 aa overlap (2-315:68-372) 10 20 30 pF1KE1 MWSEGR-YEYERIPRERAPPRSHPSDESGYR ..::: . ..: . .:: : .:::::: CCDS41 VNIVPKKPPLLDRPGEGSYNRYYSHVDYRDYDEGRSFSHDR---RSGPP--HRGDESGYR 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE1 WTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 WTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRS 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE1 GSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 GSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS 160 170 180 190 200 210 160 170 180 190 200 210 pF1KE1 PSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 PSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFT 220 230 240 250 260 270 220 230 240 250 260 270 pF1KE1 DQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 DQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPS 280 290 300 310 320 330 280 290 300 310 320 330 pF1KE1 LEKSIQFALRQNLHEIESAGQTWQQVPPVRNTEMDHDGTPENEGEETAQSALFGFQHDAS :::::::::::::::: :. . : ... ..: . .. :: CCDS41 LEKSIQFALRQNLHEI---GE--RCVEELKHFIAEYDTSTQDFGEPF 340 350 360 370 340 350 360 370 380 390 pF1KE1 NHTIVGLGPNPVPEMKETTLQAPQPPQAPQPLQPRKKRVRRTTQLRRTTGAPDITWGMLK >>CCDS44861.1 PPHLN1 gene_id:51535|Hs108|chr12 (348 aa) initn: 1158 init1: 954 opt: 1018 Z-score: 768.3 bits: 151.0 E(32554): 1.8e-36 Smith-Waterman score: 1566; 73.0% identity (76.0% similar) in 366 aa overlap (5-315:5-346) 10 20 pF1KE1 MWSEGRYEYERIPRERAPPRSHPSD----------------------------------- ::::::::::::::::::::: CCDS44 MWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRD 10 20 30 40 50 60 30 40 50 60 pF1KE1 --------------------ESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER :::::::::::::::::::::::::::::::::::::::: CCDS44 YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER 70 80 90 100 110 120 70 80 90 100 110 120 pF1KE1 SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYK :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR---------- 130 140 150 160 170 130 140 150 160 170 180 pF1KE1 RQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK .:::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 ---------NKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK 180 190 200 210 220 190 200 210 220 230 240 pF1KE1 LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE 230 240 250 260 270 280 250 260 270 280 290 300 pF1KE1 IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIESAGQTWQQVPPVRNTEMD ::::::::::::::::::::::::::::::::::::::::: :. . : ... . CCDS44 IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI---GE--RCVEELKHFIAE 290 300 310 320 330 310 320 330 340 350 360 pF1KE1 HDGTPENEGEETAQSALFGFQHDASNHTIVGLGPNPVPEMKETTLQAPQPPQAPQPLQPR .: . .. :: CCDS44 YDTSTQDFGEPF 340 434 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:53:07 2016 done: Sun Nov 6 14:53:07 2016 Total Scan time: 3.440 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]