FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2204, 970 aa 1>>>pF1KE2204 970 - 970 aa - 970 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.7000+/-0.00108; mu= 12.5740+/- 0.065 mean_var=202.3938+/-39.591, 0's: 0 Z-trim(111.1): 29 B-trim: 0 in 0/52 Lambda= 0.090152 statistics sampled from 12073 (12094) to 12073 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.713), E-opt: 0.2 (0.372), width: 16 Scan time: 3.570 The best scores are: opt bits E(32554) CCDS44856.1 DDX11 gene_id:1663|Hs108|chr12 ( 970) 6542 864.4 0 CCDS41767.1 DDX11 gene_id:1663|Hs108|chr12 ( 906) 5402 716.1 7.5e-206 CCDS58224.1 DDX11 gene_id:1663|Hs108|chr12 ( 880) 5220 692.5 9.8e-199 CCDS8721.1 DDX11 gene_id:1663|Hs108|chr12 ( 856) 4464 594.1 3.8e-169 CCDS13530.3 RTEL1 gene_id:51750|Hs108|chr20 (1243) 438 70.7 2.1e-11 >>CCDS44856.1 DDX11 gene_id:1663|Hs108|chr12 (970 aa) initn: 6542 init1: 6542 opt: 6542 Z-score: 4610.1 bits: 864.4 E(32554): 0 Smith-Waterman score: 6542; 100.0% identity (100.0% similar) in 970 aa overlap (1-970:1-970) 10 20 30 40 50 60 pF1KE2 MANETQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MANETQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 WLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 WLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KEERDLVDRLKAEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 KEERDLVDRLKAEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLET 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 GPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 QFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 QFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 EEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 AAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 AAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 QLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTIND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 QLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTIND 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 FLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQPKLAGFQQFLQSLQPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 FLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQPKLAGFQQFLQSLQPR 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 TTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 TTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLL 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 NPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 NPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILP 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 LVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 LVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHW 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE2 EKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMS 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE2 EGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLSPRPGTPREGSGGEPVHEGRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLSPRPGTPREGSGGEPVHEGRQ 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE2 PVHRQGHQAPEGFCQRSAPGPAICPAPCPGQAAGLDPSPCGGQSYLWPRHCCCAEVSPGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 PVHRQGHQAPEGFCQRSAPGPAICPAPCPGQAAGLDPSPCGGQSYLWPRHCCCAEVSPGE 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE2 VGLFLMGNHTTAWRRALPLSCPLETVFVVGVVCGDPVTKVKPRRRVWSPECCQDPGTGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 VGLFLMGNHTTAWRRALPLSCPLETVFVVGVVCGDPVTKVKPRRRVWSPECCQDPGTGVS 910 920 930 940 950 960 970 pF1KE2 SRRRKWGNPE :::::::::: CCDS44 SRRRKWGNPE 970 >>CCDS41767.1 DDX11 gene_id:1663|Hs108|chr12 (906 aa) initn: 5395 init1: 5395 opt: 5402 Z-score: 3809.2 bits: 716.1 E(32554): 7.5e-206 Smith-Waterman score: 5402; 95.0% identity (96.2% similar) in 875 aa overlap (1-867:1-875) 10 20 30 40 50 60 pF1KE2 MANETQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MANETQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 WLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 WLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KEERDLVDRLKAEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 KEERDLVDRLKAEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLET 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 GPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 GPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 QFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 QFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 EEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 EEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 AAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 AAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 QLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTIND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 QLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTIND 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 FLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQPKLAGFQQFLQSLQPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 FLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQPKLAGFQQFLQSLQPR 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 TTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 TTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLL 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 NPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 NPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILP 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 LVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 LVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHW 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE2 EKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 EKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMS 730 740 750 760 770 780 790 800 810 820 830 pF1KE2 EGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLSPRPGTPREGSG------GEP ::::::::::::::::::::::::::::::::::::::: :: :.. . CCDS41 EGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKA 790 800 810 820 830 840 840 850 860 870 880 890 pF1KE2 VHE--GRQPVHRQGHQAPEGFCQRSAPGPAICPAPCPGQAAGLDPSPCGGQSYLWPRHCC :.. :: :.. . . :: : :.. : CCDS41 VNQSIGRAIRHQKDFASVVLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHR 850 860 870 880 890 900 900 910 920 930 940 950 pF1KE2 CAEVSPGEVGLFLMGNHTTAWRRALPLSCPLETVFVVGVVCGDPVTKVKPRRRVWSPECC CCDS41 EKSASS >>CCDS58224.1 DDX11 gene_id:1663|Hs108|chr12 (880 aa) initn: 5213 init1: 5213 opt: 5220 Z-score: 3681.4 bits: 692.5 E(32554): 9.8e-199 Smith-Waterman score: 5220; 94.8% identity (96.1% similar) in 849 aa overlap (27-867:1-849) 10 20 30 40 50 60 pF1KE2 MANETQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALS :::::::::::::::::::::::::::::::::: CCDS58 MAELYRVLEAGKIGIFESPTGTGKSLSLICGALS 10 20 30 70 80 90 100 110 120 pF1KE2 WLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 WLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQK 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE2 KEERDLVDRLKAEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 KEERDLVDRLKAEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLET 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE2 GPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 GPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLA 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE2 QFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 QFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAE 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE2 EEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 EEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIP 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE2 AAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 AAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHS 340 350 360 370 380 390 430 440 450 460 470 480 pF1KE2 QLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTIND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 QLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTIND 400 410 420 430 440 450 490 500 510 520 530 540 pF1KE2 FLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQPKLAGFQQFLQSLQPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 FLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQPKLAGFQQFLQSLQPR 460 470 480 490 500 510 550 560 570 580 590 600 pF1KE2 TTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 TTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLL 520 530 540 550 560 570 610 620 630 640 650 660 pF1KE2 NPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 NPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILP 580 590 600 610 620 630 670 680 690 700 710 720 pF1KE2 LVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHW 640 650 660 670 680 690 730 740 750 760 770 780 pF1KE2 EKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 EKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMS 700 710 720 730 740 750 790 800 810 820 830 pF1KE2 EGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLSPRPGTPREGSG------GEP ::::::::::::::::::::::::::::::::::::::: :: :.. . CCDS58 EGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKA 760 770 780 790 800 810 840 850 860 870 880 890 pF1KE2 VHE--GRQPVHRQGHQAPEGFCQRSAPGPAICPAPCPGQAAGLDPSPCGGQSYLWPRHCC :.. :: :.. . . :: : :.. : CCDS58 VNQSIGRAIRHQKDFASVVLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHR 820 830 840 850 860 870 900 910 920 930 940 950 pF1KE2 CAEVSPGEVGLFLMGNHTTAWRRALPLSCPLETVFVVGVVCGDPVTKVKPRRRVWSPECC CCDS58 EKSASS 880 >>CCDS8721.1 DDX11 gene_id:1663|Hs108|chr12 (856 aa) initn: 4464 init1: 4464 opt: 4464 Z-score: 3150.1 bits: 594.1 E(32554): 3.8e-169 Smith-Waterman score: 4932; 89.3% identity (90.5% similar) in 875 aa overlap (1-867:1-825) 10 20 30 40 50 60 pF1KE2 MANETQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 MANETQKVGAIHFPFPFTPYSIQEDFMAELYRVLEAGKIGIFESPTGTGKSLSLICGALS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 WLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 WLRDFEQKKREEEARLLETGTGPLHDEKDESLCLSSSCEGAAGTPRPAGEPAWVTQFVQK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KEERDLVDRLKAEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 KEERDLVDRLKAEQARRKQREERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLET 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 GPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 GPEAERLEQLESGEEELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 QFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 QFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 EEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 EEKPKRRRQEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 AAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 AAQLVVLPYQMLLHAATRQAAGIRLQDQVVIIDEAHNLIDTITGMHSVEVSGSQLCQAHS 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 QLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTIND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 QLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSLSQTGTELKTIND 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 FLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQPKLAGFQQFLQSLQPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 FLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQPKLAGFQQFLQSLQPR 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 TTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 TTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQGSLSQSTLKFLLL 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 NPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS87 NPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVIPPDNILP 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 LVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQVHAHW :::::::::::::::::::::::: CCDS87 LVICSGISNQPLEFTFQKRELPQM------------------------------------ 670 680 730 740 750 760 770 780 pF1KE2 EKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMS :::::::::::::::::::::::::::::::::::::::::::::: CCDS87 --------------IFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTGALLLSVVGGKMS 690 700 710 720 730 790 800 810 820 830 pF1KE2 EGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLSPRPGTPREGSG------GEP ::::::::::::::::::::::::::::::::::::::: :: :.. . CCDS87 EGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLPRAPGQAPPGKALVENLCMKA 740 750 760 770 780 790 840 850 860 870 880 890 pF1KE2 VHE--GRQPVHRQGHQAPEGFCQRSAPGPAICPAPCPGQAAGLDPSPCGGQSYLWPRHCC :.. :: :.. . . :: : :.. : CCDS87 VNQSIGRAIRHQKDFASVVLLDQRYARPPVLAKLPAWIRARVEVKATFGPAIAAVQKFHR 800 810 820 830 840 850 900 910 920 930 940 950 pF1KE2 CAEVSPGEVGLFLMGNHTTAWRRALPLSCPLETVFVVGVVCGDPVTKVKPRRRVWSPECC CCDS87 EKSASS >>CCDS13530.3 RTEL1 gene_id:51750|Hs108|chr20 (1243 aa) initn: 713 init1: 209 opt: 438 Z-score: 318.2 bits: 70.7 E(32554): 2.1e-11 Smith-Waterman score: 605; 25.2% identity (55.4% similar) in 652 aa overlap (226-849:106-718) 200 210 220 230 240 250 pF1KE2 ELVLAEYESDEEKKVASRVDEDEDDLEEEHITKIYYCSRTHSQLAQFVHEVKKSPFGKDV : :: : :::::::.: ..:.... . . CCDS13 AQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQVINELRNTSYRSRC 80 90 100 110 120 130 260 270 280 290 300 pF1KE2 R-----LVSLGSRQNLC--VNEDVKSLGSVQLINDRCVDMQRSRHEKKKGAEEEKPKRRR : : . : .. . : ::: . . :. . ...:... . :. CCDS13 RATLWVLETAPPRPTVLSPTRPKVCVLGSREQL---CIHPEVKKQESNH---LQIHLCRK 140 150 160 170 180 310 320 330 340 350 360 pF1KE2 QEKQAACPFYNHEQMGLLRDEALAEVKDMEQLLALGKEARACPYYGSRLAIPAAQLVVLP . . .: :::. . :..: . . :.:.:. :.. :.:::: :: :... .: CCDS13 KVASRSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMP 190 200 210 220 230 240 370 380 390 400 pF1KE2 YQMLLHAATRQAAGIRLQDQVVIIDEAHNLI--------------DTITGMHSVE----- :..:: : .:.: .: :. :::.:::::. : .:. .. CCDS13 YNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEE 250 260 270 280 290 300 410 420 430 440 450 460 pF1KE2 -VSGSQLCQAHSQLLQYVERYGKRLKAKNLMYLKQILYLLEKFVAVLGGNIKQNPNTQSL ....: . : .. : .. ... ::.:: :: . . .. . ... CCDS13 QTKAAQQGEPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDA----VELPGDDSGV 310 320 330 340 350 360 470 480 490 500 510 520 pF1KE2 SQTGTELKTINDFLFQSQIDNINLFKVQRYCEKSMISRKLFGFTERYGAVFSSREQPKLA .. :. : ... ..:: :.. . : . ... . .. : :. .. ::: CCDS13 TKPGSY---IFELFAEAQIT----FQT-KGCILDSLDQIIQHLAGRAGVFTNTAGLQKLA 370 380 390 400 410 530 540 550 560 570 580 pF1KE2 GFQQFLQSLQPRTTEALAAPADESQASTLRPASPLMHIQGFLAALTTANQDGRVILSRQG . :.. :..: ..:.. . ..:. : .::. . :: : . . . . CCDS13 DIIQIVFSVDPSE----GSPGSPAGLGALQ--SYKVHIHPDAGHRRTA-QRSDAWSTTAA 420 430 440 450 460 470 590 600 610 620 630 640 pF1KE2 SLSQSTLKFLLLNPAVHFAQVVKE-CRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEF ..:.. ..:. . ..:.. :......::. :::.: .. . : . CCDS13 RKRGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEM------QIPFPVCL 480 490 500 510 520 650 660 670 680 690 700 pF1KE2 SCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFF :.: .: :. : .. : .:..: . .. .:. : :. ::: :.. :: CCDS13 ENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFF 530 540 550 560 570 580 710 720 730 740 750 760 pF1KE2 PSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQVT ::: ... :. : .. : : .: ::.: . ... :: . : :. : CCDS13 PSYPVMEKSLEFWRARDLARKMEALKPLFVEPRSKGSFSETISAYYARVAAPGS-----T 590 600 610 620 630 770 780 790 800 810 820 pF1KE2 GALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLDQTLSPRPGTPR :: .:.: :: :::..:::. :: :...:.:.: . .. :: .::. .. . :. CCDS13 GATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDE-MKGQGGAGG 640 650 660 670 680 690 830 840 850 860 870 880 pF1KE2 EGSGGEPVHEGRQPVHRQGHQAPEGFCQRSAPGPAICPAPCPGQAAGLDPSPCGGQSYLW . .:. . :: . : .:: CCDS13 QFLSGQEWY--RQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHV 700 710 720 730 740 750 970 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 06:26:02 2016 done: Tue Nov 8 06:26:02 2016 Total Scan time: 3.570 Total Display time: 0.090 Function used was FASTA [36.3.4 Apr, 2011]