FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6283, 268 aa 1>>>pF1KE6283 268 - 268 aa - 268 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.6819+/-0.000322; mu= -15.2452+/- 0.020 mean_var=292.6128+/-59.858, 0's: 0 Z-trim(124.3): 5 B-trim: 0 in 0/61 Lambda= 0.074977 statistics sampled from 45682 (45688) to 45682 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.832), E-opt: 0.2 (0.536), width: 16 Scan time: 6.610 The best scores are: opt bits E(85289) NP_112589 (OMIM: 607749) cell division cycle-assoc ( 268) 1812 208.5 1.1e-53 NP_001284533 (OMIM: 607749) cell division cycle-as ( 182) 1232 145.6 6e-35 NP_001284532 (OMIM: 607749) cell division cycle-as ( 219) 1229 145.4 8.8e-35 NP_001284531 (OMIM: 607749) cell division cycle-as ( 243) 1082 129.5 5.9e-30 NP_001317948 (OMIM: 607749) cell division cycle-as ( 105) 705 88.5 5.3e-18 >>NP_112589 (OMIM: 607749) cell division cycle-associate (268 aa) initn: 1812 init1: 1812 opt: 1812 Z-score: 1084.9 bits: 208.5 E(85289): 1.1e-53 Smith-Waterman score: 1812; 100.0% identity (100.0% similar) in 268 aa overlap (1-268:1-268) 10 20 30 40 50 60 pF1KE6 MGSAKSVPVTPARPPPHNKHLARVADPRSPSAGILRTPIQVESSPQPGLPAGEQLEGLKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_112 MGSAKSVPVTPARPPPHNKHLARVADPRSPSAGILRTPIQVESSPQPGLPAGEQLEGLKH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AQDSDPRSPTLGIARTPMKTSSGDPPSPLVKQLSEVFETEDSKSNLPPEPVLPPEAPLSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_112 AQDSDPRSPTLGIARTPMKTSSGDPPSPLVKQLSEVFETEDSKSNLPPEPVLPPEAPLSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ELDLPLGTQLSVEEQMPPWNQTEFPSKQVFSKEEARQPTETPVASQSSDKPSRDPETPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_112 ELDLPLGTQLSVEEQMPPWNQTEFPSKQVFSKEEARQPTETPVASQSSDKPSRDPETPRS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SGSMRNRWKPNSSKVLGRSPLTILQDDNSPGTLTLRQGKRPSPLSENVSELKEGAILGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_112 SGSMRNRWKPNSSKVLGRSPLTILQDDNSPGTLTLRQGKRPSPLSENVSELKEGAILGTG 190 200 210 220 230 240 250 260 pF1KE6 RLLKTGGRAWEQGQDHDKENQHFPLVES :::::::::::::::::::::::::::: NP_112 RLLKTGGRAWEQGQDHDKENQHFPLVES 250 260 >>NP_001284533 (OMIM: 607749) cell division cycle-associ (182 aa) initn: 1232 init1: 1232 opt: 1232 Z-score: 748.5 bits: 145.6 E(85289): 6e-35 Smith-Waterman score: 1232; 100.0% identity (100.0% similar) in 182 aa overlap (1-182:1-182) 10 20 30 40 50 60 pF1KE6 MGSAKSVPVTPARPPPHNKHLARVADPRSPSAGILRTPIQVESSPQPGLPAGEQLEGLKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGSAKSVPVTPARPPPHNKHLARVADPRSPSAGILRTPIQVESSPQPGLPAGEQLEGLKH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AQDSDPRSPTLGIARTPMKTSSGDPPSPLVKQLSEVFETEDSKSNLPPEPVLPPEAPLSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AQDSDPRSPTLGIARTPMKTSSGDPPSPLVKQLSEVFETEDSKSNLPPEPVLPPEAPLSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ELDLPLGTQLSVEEQMPPWNQTEFPSKQVFSKEEARQPTETPVASQSSDKPSRDPETPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELDLPLGTQLSVEEQMPPWNQTEFPSKQVFSKEEARQPTETPVASQSSDKPSRDPETPRS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SGSMRNRWKPNSSKVLGRSPLTILQDDNSPGTLTLRQGKRPSPLSENVSELKEGAILGTG :: NP_001 SG >>NP_001284532 (OMIM: 607749) cell division cycle-associ (219 aa) initn: 1307 init1: 1229 opt: 1229 Z-score: 745.4 bits: 145.4 E(85289): 8.8e-35 Smith-Waterman score: 1229; 99.5% identity (100.0% similar) in 183 aa overlap (1-183:1-183) 10 20 30 40 50 60 pF1KE6 MGSAKSVPVTPARPPPHNKHLARVADPRSPSAGILRTPIQVESSPQPGLPAGEQLEGLKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGSAKSVPVTPARPPPHNKHLARVADPRSPSAGILRTPIQVESSPQPGLPAGEQLEGLKH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AQDSDPRSPTLGIARTPMKTSSGDPPSPLVKQLSEVFETEDSKSNLPPEPVLPPEAPLSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AQDSDPRSPTLGIARTPMKTSSGDPPSPLVKQLSEVFETEDSKSNLPPEPVLPPEAPLSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 ELDLPLGTQLSVEEQMPPWNQTEFPSKQVFSKEEARQPTETPVASQSSDKPSRDPETPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELDLPLGTQLSVEEQMPPWNQTEFPSKQVFSKEEARQPTETPVASQSSDKPSRDPETPRS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 SGSMRNRWKPNSSKVLGRSPLTILQDDNSPGTLTLRQGKRPSPLSENVSELKEGAILGTG :.: NP_001 SASSVPDFEEAVPGTCGHSHPVSCDSQAAHPVIVAREDA 190 200 210 >>NP_001284531 (OMIM: 607749) cell division cycle-associ (243 aa) initn: 1081 init1: 1081 opt: 1082 Z-score: 658.8 bits: 129.5 E(85289): 5.9e-30 Smith-Waterman score: 1584; 90.7% identity (90.7% similar) in 268 aa overlap (1-268:1-243) 10 20 30 40 50 60 pF1KE6 MGSAKSVPVTPARPPPHNKHLARVADPRSPSAGILRTPIQVESSPQPGLPAGEQLEGLKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGSAKSVPVTPARPPPHNKHLARVADPRSPSAGILRTPIQVESSPQPGLPAGEQLEGLKH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AQDSDPRSPTLGIARTPMKTSSGDPPSPLVKQLSEVFETEDSKSNLPPEPVLPPEAPLSS ::::::::::::::::::::::: :::::::::::: NP_001 AQDSDPRSPTLGIARTPMKTSSG-------------------------EPVLPPEAPLSS 70 80 90 130 140 150 160 170 180 pF1KE6 ELDLPLGTQLSVEEQMPPWNQTEFPSKQVFSKEEARQPTETPVASQSSDKPSRDPETPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ELDLPLGTQLSVEEQMPPWNQTEFPSKQVFSKEEARQPTETPVASQSSDKPSRDPETPRS 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE6 SGSMRNRWKPNSSKVLGRSPLTILQDDNSPGTLTLRQGKRPSPLSENVSELKEGAILGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SGSMRNRWKPNSSKVLGRSPLTILQDDNSPGTLTLRQGKRPSPLSENVSELKEGAILGTG 160 170 180 190 200 210 250 260 pF1KE6 RLLKTGGRAWEQGQDHDKENQHFPLVES :::::::::::::::::::::::::::: NP_001 RLLKTGGRAWEQGQDHDKENQHFPLVES 220 230 240 >>NP_001317948 (OMIM: 607749) cell division cycle-associ (105 aa) initn: 705 init1: 705 opt: 705 Z-score: 444.1 bits: 88.5 E(85289): 5.3e-18 Smith-Waterman score: 705; 100.0% identity (100.0% similar) in 105 aa overlap (78-182:1-105) 50 60 70 80 90 100 pF1KE6 GLPAGEQLEGLKHAQDSDPRSPTLGIARTPMKTSSGDPPSPLVKQLSEVFETEDSKSNLP :::::::::::::::::::::::::::::: NP_001 MKTSSGDPPSPLVKQLSEVFETEDSKSNLP 10 20 30 110 120 130 140 150 160 pF1KE6 PEPVLPPEAPLSSELDLPLGTQLSVEEQMPPWNQTEFPSKQVFSKEEARQPTETPVASQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PEPVLPPEAPLSSELDLPLGTQLSVEEQMPPWNQTEFPSKQVFSKEEARQPTETPVASQS 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE6 SDKPSRDPETPRSSGSMRNRWKPNSSKVLGRSPLTILQDDNSPGTLTLRQGKRPSPLSEN ::::::::::::::: NP_001 SDKPSRDPETPRSSG 100 268 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:45:54 2016 done: Tue Nov 8 11:45:55 2016 Total Scan time: 6.610 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]