(Linear) (Six-base) MAPSORT of: KIEE3980.seq Check: 6045 from: 1 to: 1587 KIEE3980.orf With 182 enzymes: SgfI * March 22, 2012 17:03 .. AccI GT'mk_AC Cuts at: 0 1181 1429 1587 Size: 1181 248 158 Fragments arranged by size: 1181 248 158 AflIII A'CryG_T Cuts at: 0 1280 1587 Size: 1280 307 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 86 1120 1587 Size: 86 1034 467 Fragments arranged by size: 1034 467 86 AlwNI CAG_nnn'CTG Cuts at: 0 1092 1195 1587 Size: 1092 103 392 Fragments arranged by size: 1092 392 103 AvaI C'yCGr_G Cuts at: 0 1504 1587 Size: 1504 83 BanI G'GyrC_C Cuts at: 0 30 1587 Size: 30 1557 BanII G_rGCy'C Cuts at: 0 508 742 769 833 1318 1587 Size: 508 234 27 64 485 269 Fragments arranged by size: 508 485 269 234 64 27 BbeI G_GCGC'C Cuts at: 0 34 1587 Size: 34 1553 BbsI GAAGACnn'nnnn_ Cuts at: 0 689 1587 Size: 689 898 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 513 547 1587 Size: 513 34 1040 Fragments arranged by size: 1040 513 34 BclI T'GATC_A Cuts at: 0 131 1587 Size: 131 1456 BglI GCCn_nnn'nGGC Cuts at: 0 394 1587 Size: 394 1193 Bme1580I G_kGCm'C Cuts at: 0 338 937 1364 1587 Size: 338 599 427 223 Fragments arranged by size: 599 427 338 223 BmgBI CAC'GTC Cuts at: 0 1437 1587 Size: 1437 150 BmrI ACTGGGnnnn_n' Cuts at: 0 585 640 1587 Size: 585 55 947 Fragments arranged by size: 947 585 55 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 373 598 1155 1587 Size: 373 225 557 432 Fragments arranged by size: 557 432 373 225 BsaI GGTCTCn'nnnn_ Cuts at: 0 197 574 1518 1587 Size: 197 377 944 69 Fragments arranged by size: 944 377 197 69 BsaBI GATnn'nnATC Cuts at: 0 136 1587 Size: 136 1451 BsaHI Gr'CG_yC Cuts at: 0 31 281 1587 Size: 31 250 1306 Fragments arranged by size: 1306 250 31 BsaWI w'CCGG_w Cuts at: 0 186 875 1587 Size: 186 689 712 Fragments arranged by size: 712 689 186 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 790 820 1587 Size: 790 30 767 Fragments arranged by size: 790 767 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 370 688 732 735 992 1429 1587 Size: 370 318 44 3 257 437 158 Fragments arranged by size: 437 370 318 257 158 44 3 BseYI C'CCAG_C Cuts at: 0 271 375 458 1125 1219 1333 1528 1587 Size: 271 104 83 667 94 114 195 59 Fragments arranged by size: 667 271 195 114 104 94 83 59 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 967 1587 Size: 967 620 BsiEI CG_ry'CG Cuts at: 0 261 1587 Size: 261 1326 BsiHKAI G_wGCw'C Cuts at: 0 508 833 1587 Size: 508 325 754 Fragments arranged by size: 754 508 325 BsmI GAATG_Cn' Cuts at: 0 1577 1587 Size: 1577 10 BsmBI CGTCTCn'nnnn_ Cuts at: 0 540 793 1377 1396 1587 Size: 540 253 584 19 191 Fragments arranged by size: 584 540 253 191 19 Bsp1286I G_dGCh'C Cuts at: 0 338 508 742 769 833 937 1318 1364 Size: 338 170 234 27 64 104 381 46 Cuts at: 1364 1587 Size: 223 Fragments arranged by size: 381 338 234 223 170 104 64 46 27 BspEI T'CCGG_A Cuts at: 0 186 875 1587 Size: 186 689 712 Fragments arranged by size: 712 689 186 BspHI T'CATG_A Cuts at: 0 884 1587 Size: 884 703 BsrBI CCG'CTC Cuts at: 0 123 1587 Size: 123 1464 BsrDI GCAATG_nn' Cuts at: 0 1346 1587 Size: 1346 241 BsrFI r'CCGG_y Cuts at: 0 91 212 266 324 513 864 1587 Size: 91 121 54 58 189 351 723 Fragments arranged by size: 723 351 189 121 91 58 54 BstXI CCAn_nnnn'nTGG Cuts at: 0 1011 1296 1587 Size: 1011 285 291 Fragments arranged by size: 1011 291 285 BstYI r'GATC_y Cuts at: 0 359 1088 1587 Size: 359 729 499 Fragments arranged by size: 729 499 359 BstZ17I GTA'TAC Cuts at: 0 1430 1587 Size: 1430 157 Bsu36I CC'TnA_GG Cuts at: 0 238 1465 1587 Size: 238 1227 122 Fragments arranged by size: 1227 238 122 BtgI C'CryG_G Cuts at: 0 45 1262 1587 Size: 45 1217 325 Fragments arranged by size: 1217 325 45 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 510 1314 1587 Size: 510 804 273 Fragments arranged by size: 804 510 273 BtsI GCAGTG_nn' Cuts at: 0 1253 1587 Size: 1253 334 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 1423 1458 1587 Size: 1423 35 129 Fragments arranged by size: 1423 129 35 EaeI y'GGCC_r Cuts at: 0 210 515 984 1013 1587 Size: 210 305 469 29 574 Fragments arranged by size: 574 469 305 210 29 EarI CTCTTCn'nnn_ Cuts at: 0 665 1153 1171 1587 Size: 665 488 18 416 Fragments arranged by size: 665 488 416 18 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 837 1021 1587 Size: 837 184 566 Fragments arranged by size: 837 566 184 EcoICRI GAG'CTC Cuts at: 0 506 831 1587 Size: 506 325 756 Fragments arranged by size: 756 506 325 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 373 598 1155 1587 Size: 373 225 557 432 Fragments arranged by size: 557 432 373 225 EcoNI CCTnn'n_nnAGG Cuts at: 0 1116 1587 Size: 1116 471 EcoO109I rG'GnC_Cy Cuts at: 0 387 1338 1587 Size: 387 951 249 Fragments arranged by size: 951 387 249 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 885 1515 1587 Size: 885 630 72 Fragments arranged by size: 885 630 72 FseI GG_CCGG'CC Cuts at: 0 517 1587 Size: 517 1070 FspI TGC'GCA Cuts at: 0 169 1587 Size: 169 1418 HaeII r_GCGC'y Cuts at: 0 34 474 1587 Size: 34 440 1113 Fragments arranged by size: 1113 440 34 HincII GTy'rAC Cuts at: 0 330 1587 Size: 330 1257 KasI G'GCGC_C Cuts at: 0 30 1587 Size: 30 1557 MfeI C'AATT_G Cuts at: 0 163 1587 Size: 163 1424 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 1400 1587 Size: 1400 187 MscI TGG'CCA Cuts at: 0 1015 1587 Size: 1015 572 MslI CAynn'nnrTG Cuts at: 0 1294 1587 Size: 1294 293 MspA1I CmG'CkG Cuts at: 0 375 450 1587 Size: 375 75 1137 Fragments arranged by size: 1137 375 75 NaeI GCC'GGC Cuts at: 0 93 214 515 866 1587 Size: 93 121 301 351 721 Fragments arranged by size: 721 351 301 121 93 NarI GG'CG_CC Cuts at: 0 31 1587 Size: 31 1556 NgoMIV G'CCGG_C Cuts at: 0 91 212 513 864 1587 Size: 91 121 301 351 723 Fragments arranged by size: 723 351 301 121 91 NspI r_CATG'y Cuts at: 0 1284 1587 Size: 1284 303 PasI CC'CwG_GG Cuts at: 0 718 930 1587 Size: 718 212 657 Fragments arranged by size: 718 657 212 PciI A'CATG_T Cuts at: 0 1280 1587 Size: 1280 307 PflMI CCAn_nnn'nTGG Cuts at: 0 973 1587 Size: 973 614 PfoI T'CCnGG_A Cuts at: 0 83 350 401 1226 1587 Size: 83 267 51 825 361 Fragments arranged by size: 825 361 267 83 51 PpuMI rG'GwC_Cy Cuts at: 0 1338 1587 Size: 1338 249 PstI C_TGCA'G Cuts at: 0 1088 1587 Size: 1088 499 PvuII CAG'CTG Cuts at: 0 375 1587 Size: 375 1212 SacI G_AGCT'C Cuts at: 0 508 833 1587 Size: 508 325 754 Fragments arranged by size: 754 508 325 ScaI AGT'ACT Cuts at: 0 250 756 1587 Size: 250 506 831 Fragments arranged by size: 831 506 250 SfcI C'TryA_G Cuts at: 0 111 1084 1587 Size: 111 973 503 Fragments arranged by size: 973 503 111 SfiI GGCCn_nnn'nGGCC Cuts at: 0 394 1587 Size: 394 1193 SfoI GGC'GCC Cuts at: 0 32 1587 Size: 32 1555 StuI AGG'CCT Cuts at: 0 1111 1587 Size: 1111 476 StyI C'CwwG_G Cuts at: 0 1076 1587 Size: 1076 511 TatI w'GTAC_w Cuts at: 0 248 754 1587 Size: 248 506 833 Fragments arranged by size: 833 506 248 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 790 822 1295 1327 1587 Size: 790 32 473 32 260 Fragments arranged by size: 790 473 260 32 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 1122 1441 1587 Size: 1122 319 146 Fragments arranged by size: 1122 319 146 Enzymes that do cut: AccI AflIII AlfI AlwNI AvaI BanI BanII BbeI BbsI BcgI BclI BglI Bme1580I BmgBI BmrI BpmI BsaI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BsrBI BsrDI BsrFI BstXI BstYI BstZ17I Bsu36I BtgI BtgZI BtsI CspCI EaeI EarI EciI EcoICRI Eco57MI EcoNI EcoO109I FalI FseI FspI HaeII HincII KasI MfeI MmeI MscI MslI MspA1I NaeI NarI NgoMIV NspI PasI PciI PflMI PfoI PpuMI PstI PvuII SacI ScaI SfcI SfiI SfoI StuI StyI TatI TstI XcmI Enzymes that do not cut: AarI AatII Acc65I AclI AcuI AfeI AflII AgeI AhdI AleI AloI ApaI ApaLI ApoI AscI AseI AsiSI AvrII BaeI BamHI BbvCI BciVI BfrBI BglII BlpI BmtI BplI Bpu10I BpuEI BsaAI BsiWI BspMI BsrGI BssHII BssSI BstAPI BstBI BstEII ClaI DraI DraIII DrdI EagI EcoRI EcoRV FspAI Hin4I HindIII HpaI KpnI MluI NcoI NdeI NheI NotI NruI NsiI PacI PmeI PmlI PpiI PshAI PsiI PspOMI PspXI PsrI PvuI RsrII SacII SalI SanDI SapI SbfI SexAI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SrfI SspI SwaI TaqII Tth111I XbaI XhoI XmaI XmnI ZraI