FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3969, 418 aa 1>>>pF1KE3969 418 - 418 aa - 418 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5638+/-0.0005; mu= 15.7654+/- 0.031 mean_var=82.6874+/-16.965, 0's: 0 Z-trim(109.3): 157 B-trim: 134 in 1/49 Lambda= 0.141044 statistics sampled from 17258 (17443) to 17258 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.56), E-opt: 0.2 (0.205), width: 16 Scan time: 7.950 The best scores are: opt bits E(85289) NP_689654 (OMIM: 609081) F-box/LRR-repeat protein ( 418) 2764 572.9 5.1e-163 XP_016874365 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 387) 2540 527.3 2.5e-149 XP_016874364 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 404) 2539 527.1 3e-149 NP_001171835 (OMIM: 609086) F-box/LRR-repeat prote ( 404) 465 105.1 3.3e-22 XP_005257804 (OMIM: 609086) PREDICTED: F-box/LRR-r ( 441) 465 105.1 3.5e-22 NP_001156787 (OMIM: 609083) F-box/LRR-repeat prote ( 701) 381 88.2 7.1e-17 XP_005272105 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 712) 368 85.5 4.5e-16 XP_006715961 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 584) 362 84.3 9e-16 XP_011514232 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 362 84.3 1.1e-15 XP_005250266 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 362 84.3 1.1e-15 XP_016867342 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 362 84.3 1.1e-15 NP_659469 (OMIM: 609080) F-box/LRR-repeat protein ( 735) 362 84.3 1.1e-15 XP_016867341 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 362 84.4 1.1e-15 XP_005250264 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 792) 362 84.4 1.1e-15 XP_016867339 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 822) 362 84.4 1.2e-15 XP_005250262 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 825) 362 84.4 1.2e-15 NP_699181 (OMIM: 609082) F-box/LRR-repeat protein ( 479) 357 83.2 1.6e-15 XP_016861582 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 348 81.3 4.3e-15 XP_005265073 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 348 81.3 4.3e-15 XP_011531861 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 348 81.3 4.3e-15 XP_016861581 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 348 81.3 4.3e-15 XP_005265072 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 348 81.3 4.3e-15 XP_005265071 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 454) 348 81.3 5.3e-15 XP_011514231 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 783) 351 82.1 5.3e-15 XP_016867340 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 809) 350 81.9 6.3e-15 XP_005265074 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 318) 341 79.8 1.1e-14 XP_016861583 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 318) 341 79.8 1.1e-14 NP_036289 (OMIM: 605652) F-box/LRR-repeat protein ( 423) 341 79.9 1.3e-14 NP_116264 (OMIM: 609086) F-box/LRR-repeat protein ( 436) 319 75.4 3.1e-13 XP_005257803 (OMIM: 609086) PREDICTED: F-box/LRR-r ( 473) 319 75.4 3.3e-13 NP_001165184 (OMIM: 605652) F-box/LRR-repeat prote ( 355) 304 72.3 2.2e-12 XP_011541877 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 618) 283 68.2 6.5e-11 XP_011541876 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 621) 283 68.2 6.5e-11 XP_011541880 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 582) 276 66.8 1.7e-10 XP_011541879 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 589) 276 66.8 1.7e-10 XP_011541878 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 610) 276 66.8 1.7e-10 XP_005270207 (OMIM: 610287) PREDICTED: F-box/LRR-r ( 300) 269 65.1 2.6e-10 XP_005270208 (OMIM: 610287) PREDICTED: F-box/LRR-r ( 300) 269 65.1 2.6e-10 XP_016872120 (OMIM: 610287) PREDICTED: F-box/LRR-r ( 300) 269 65.1 2.6e-10 NP_077302 (OMIM: 610287) F-box/LRR-repeat protein ( 300) 269 65.1 2.6e-10 XP_005270206 (OMIM: 610287) PREDICTED: F-box/LRR-r ( 387) 269 65.2 3.2e-10 XP_011512300 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 444) 251 61.6 4.6e-09 NP_001265246 (OMIM: 605656) F-box/LRR-repeat prote ( 444) 251 61.6 4.6e-09 XP_016864751 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 486) 251 61.6 4.9e-09 NP_036436 (OMIM: 605656) F-box/LRR-repeat protein ( 491) 251 61.6 4.9e-09 XP_011514234 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 639) 240 59.5 2.9e-08 NP_001104508 (OMIM: 609080) F-box/LRR-repeat prote ( 690) 240 59.5 3e-08 NP_001274079 (OMIM: 609080) F-box/LRR-repeat prote ( 707) 240 59.5 3.1e-08 XP_005250265 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 240 59.5 3.4e-08 XP_011514230 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 797) 240 59.5 3.4e-08 >>NP_689654 (OMIM: 609081) F-box/LRR-repeat protein 14 [ (418 aa) initn: 2764 init1: 2764 opt: 2764 Z-score: 3047.7 bits: 572.9 E(85289): 5.1e-163 Smith-Waterman score: 2764; 100.0% identity (100.0% similar) in 418 aa overlap (1-418:1-418) 10 20 30 40 50 60 pF1KE3 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 LFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 HLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 HLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 AQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 AQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG 310 320 330 340 350 360 370 380 390 400 410 pF1KE3 IDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_689 IDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR 370 380 390 400 410 >>XP_016874365 (OMIM: 609081) PREDICTED: F-box/LRR-repea (387 aa) initn: 2673 init1: 2540 opt: 2540 Z-score: 2801.9 bits: 527.3 E(85289): 2.5e-149 Smith-Waterman score: 2540; 99.7% identity (99.7% similar) in 386 aa overlap (1-386:1-386) 10 20 30 40 50 60 pF1KE3 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 HLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 AQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG 310 320 330 340 350 360 370 380 390 400 410 pF1KE3 IDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR :::::::::::::::::::::::: : XP_016 IDLYGCTRITKRGLERITQLPCLKGLL 370 380 >>XP_016874364 (OMIM: 609081) PREDICTED: F-box/LRR-repea (404 aa) initn: 2539 init1: 2539 opt: 2539 Z-score: 2800.5 bits: 527.1 E(85289): 3e-149 Smith-Waterman score: 2632; 96.7% identity (96.7% similar) in 418 aa overlap (1-418:1-404) 10 20 30 40 50 60 pF1KE3 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 LFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 HLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 AQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG 310 320 330 340 350 360 370 380 390 400 410 pF1KE3 IDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR :::::::::::::::::::::::: :::::::::::::::::::: XP_016 IDLYGCTRITKRGLERITQLPCLK--------------EARGDFSPLFTVRTRGSSRR 370 380 390 400 >>NP_001171835 (OMIM: 609086) F-box/LRR-repeat protein 2 (404 aa) initn: 379 init1: 183 opt: 465 Z-score: 519.7 bits: 105.1 E(85289): 3.3e-22 Smith-Waterman score: 474; 30.4% identity (58.8% similar) in 391 aa overlap (2-385:21-377) 10 20 30 40 pF1KE3 METHISCLFP-ELLAMIFGYLDVRDKGRAAQVCTAWRDAAY :. :. .: ::: ::..::: : ::: :: : NP_001 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLAL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 HKSVWRGVEAKLHLRRANPSLFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGC : :. .. . ..: ....: .. .. .: .. ...:.: :: NP_001 DGSNWQRIDL-FDFQR-------DIEGRVVENIS----KRCGGF-------LRKLSLRGC 70 80 90 100 110 120 130 140 150 160 pF1KE3 YNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTG .. ::.: ..:.:. ....:::. : . :: :. :: :... :...:. : NP_001 LGVGDNAL-RTFAQNCRNIEVLNLNGCTKTTD------AEGCPLLEQLNISWCDQVTKDG 110 120 130 140 150 170 180 190 200 210 220 pF1KE3 LLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSL . .. : ::.: :..: .: : .. .... : : :.:: : ..:: .: NP_001 IQALVRGCGGLKALFLKGCTQLEDEALKYIGAH-------CPELVTLNLQTCLQITDEGL 160 170 180 190 200 230 240 250 260 270 pF1KE3 KHISRGLTGLRLLNLSFCGGISDAGLLHLSHM-GSLRSLNLRSCDNISDTGIMHLAMGSL : :: :. : : :..:.:: : :.. :: :.. :....:.:. :: . NP_001 ITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCH 210 220 230 240 250 260 280 290 300 310 320 330 pF1KE3 RLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCH-ISDDGINRMVRQM--HG-LRTL .: .:. : .. :..: .. :. ::: :. :.:::: .. : :... NP_001 ELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVI 270 280 290 300 310 320 340 350 360 370 380 390 pF1KE3 NIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERI-TQLPCLKVLNLGLWQMT .. .: ::: .:: . . .: :.:: : .::. :..:. :.:: .:: NP_001 ELDNCPLITDASLEHL-KSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTP 330 340 350 360 370 380 400 410 pF1KE3 DSEKEARGDFSPLFTVRTRGSSRR NP_001 PPSVGGSRQRFCRCCIIL 390 400 >>XP_005257804 (OMIM: 609086) PREDICTED: F-box/LRR-repea (441 aa) initn: 379 init1: 183 opt: 465 Z-score: 519.1 bits: 105.1 E(85289): 3.5e-22 Smith-Waterman score: 474; 30.4% identity (58.8% similar) in 391 aa overlap (2-385:58-414) 10 20 30 pF1KE3 METHISCLFP-ELLAMIFGYLDVRDKGRAAQ :. :. .: ::: ::..::: : :: XP_005 RHIQKRRKMAPSRDRLLHFGFKATMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQ 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE3 VCTAWRDAAYHKSVWRGVEAKLHLRRANPSLFPSLQARGIRRVQILSLRRSLSYVIQGMA : :: : : :. .. . ..: ....: .. .. .: .. XP_005 VSRAWNVLALDGSNWQRIDL-FDFQR-------DIEGRVVENIS----KRCGGF------ 90 100 110 120 100 110 120 130 140 150 pF1KE3 NIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLEL ...:.: :: .. ::.: ..:.:. ....:::. : . :: :. :: :.. XP_005 -LRKLSLRGCLGVGDNAL-RTFAQNCRNIEVLNLNGCTKTTD------AEGCPLLEQLNI 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE3 GGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQ . :...:. :. .. : ::.: :..: .: : .. .... : : :.:: XP_005 SWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAH-------CPELVTLNLQ 190 200 210 220 230 220 230 240 250 260 pF1KE3 DCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHM-GSLRSLNLRSCDNISDT : ..:: .: : :: :. : : :..:.:: : :.. :: :.. :....:. XP_005 TCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDV 240 250 260 270 280 290 270 280 290 300 310 320 pF1KE3 GIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCH-ISDDGINRMVRQ :. :: . .: .:. : .. :..: .. :. ::: :. :.:::: .. XP_005 GFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNG 300 310 320 330 340 350 330 340 350 360 370 380 pF1KE3 M--HG-LRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERI-TQLPCLK : :..... .: ::: .:: . . .: :.:: : .::. :..:. :.:: .: XP_005 ACAHDQLEVIELDNCPLITDASLEHL-KSCHSLERIELYDCQQITRAGIKRLRTHLPNIK 360 370 380 390 400 410 390 400 410 pF1KE3 VLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR : XP_005 VHAYFAPVTPPPSVGGSRQRFCRCCIIL 420 430 440 >>NP_001156787 (OMIM: 609083) F-box/LRR-repeat protein 1 (701 aa) initn: 599 init1: 206 opt: 381 Z-score: 423.9 bits: 88.2 E(85289): 7.1e-17 Smith-Waterman score: 451; 26.1% identity (59.0% similar) in 376 aa overlap (5-379:321-666) 10 20 30 pF1KE3 METHISCLFPELLAMIFGYLDVRDKGRAAQ-VCT :. : : .: ::. :.. .. .:. :: NP_001 QQHECGDADCRESPENPCDCHREPPPETPDINQLPPSILLKIFSNLSLDERCLSASLVCK 300 310 320 330 340 350 40 50 60 70 80 90 pF1KE3 AWRDAAYHKSVWRGVEAKLHLRRANPSLFPSLQARGIRRVQILSLRRSLSYVIQGMANIE ::: . :. .: : : :. . . : . . :: NP_001 YWRDLCLDFQFWK----QLDLSS---------------RQQVTD--ELLEKIASRSQNII 360 370 380 100 110 120 130 140 150 pF1KE3 SLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLELGGC .:.: : ...:::. . : :: :::..:.:. .:.. :. ...:. NP_001 EINISDCRSMSDNGVCVLAFKCPGLLRYTAYR-CKQLSDTSIIAVASHCPLLQKVHVGNQ 390 400 410 420 430 440 160 170 180 190 200 210 pF1KE3 SNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQ ...:. :: .. ..::.... .: ..:: :. .: .::: :... .:. . NP_001 DKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIA-------KGCLKLQRIYMQENK 450 460 470 480 490 500 220 230 240 250 260 270 pF1KE3 KLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMH .:: :.: ... :. ... :. ... :..::... .: ::.:: .... .:. NP_001 LVTDQSVKAFAEHCPELQYVGFMGCS-VTSKGVIHLTKLRNLSSLDLRHITELDNETVME 510 520 530 540 550 560 280 290 300 310 320 330 pF1KE3 LAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLR .. ::.:.. . ..:. . ::. ..:: : : ::.:.: .. . : .. NP_001 IVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKITDYALIAIGRYSMTIE 570 580 590 600 610 620 340 350 360 370 380 390 pF1KE3 TLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQM :...: : .:::.: :::. ..: . :. : .... .:...: NP_001 TVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVEQLVQQYPHITFSTVLQDC 630 640 650 660 670 680 400 410 pF1KE3 TDSEKEARGDFSPLFTVRTRGSSRR NP_001 KRTLERAYQMGWTPNMSAASS 690 700 >>XP_005272105 (OMIM: 609083) PREDICTED: F-box/LRR-repea (712 aa) initn: 528 init1: 205 opt: 368 Z-score: 409.5 bits: 85.5 E(85289): 4.5e-16 Smith-Waterman score: 438; 25.4% identity (59.6% similar) in 366 aa overlap (5-369:321-656) 10 20 30 pF1KE3 METHISCLFPELLAMIFGYLDVRDKGRAAQ-VCT :. : : .: ::. :.. .. .:. :: XP_005 QQHECGDADCRESPENPCDCHREPPPETPDINQLPPSILLKIFSNLSLDERCLSASLVCK 300 310 320 330 340 350 40 50 60 70 80 90 pF1KE3 AWRDAAYHKSVWRGVEAKLHLRRANPSLFPSLQARGIRRVQILSLRRSLSYVIQGMANIE ::: . :. .. . . .... :. .. .:. :: XP_005 YWRDLCLDFQFWKQLDLSSR-QQVTDELLEKIASRS--------------------QNII 360 370 380 100 110 120 130 140 150 pF1KE3 SLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLELGGC .:.: : ...:::. . : :: :::..:.:. .:.. :. ...:. XP_005 EINISDCRSMSDNGVCVLAFKCPGLLRYTAYR-CKQLSDTSIIAVASHCPLLQKVHVGNQ 390 400 410 420 430 440 160 170 180 190 200 210 pF1KE3 SNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQ ...:. :: .. ..::.... .: ..:: :. . :.::: :... .:. . XP_005 DKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVI-------AKGCLKLQRIYMQENK 450 460 470 480 490 500 220 230 240 250 260 270 pF1KE3 KLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMH .:: :.: ... :. ... :. ... :..::... .: ::.:: .... .:. XP_005 LVTDQSVKAFAEHCPELQYVGFMGCS-VTSKGVIHLTKLRNLSSLDLRHITELDNETVME 510 520 530 540 550 560 280 290 300 310 320 330 pF1KE3 LAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLR .. ::.:.. . ..:. . ::. ..:: : : ::.:.: .. . : .. XP_005 IVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKITDYALIAIGRYSMTIE 570 580 590 600 610 620 340 350 360 370 380 390 pF1KE3 TLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQM :...: : .:::.: :::. ..: . :. : .. XP_005 TVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVRVDYQVVCFLHISIVNSLMSYPLS 630 640 650 660 670 680 400 410 pF1KE3 TDSEKEARGDFSPLFTVRTRGSSRR XP_005 FSISTPVYYILYIHFICIYAIIAMHCLPAFVN 690 700 710 >>XP_006715961 (OMIM: 609080) PREDICTED: F-box/LRR-repea (584 aa) initn: 465 init1: 150 opt: 362 Z-score: 404.2 bits: 84.3 E(85289): 9e-16 Smith-Waterman score: 415; 31.5% identity (64.0% similar) in 292 aa overlap (92-378:251-529) 70 80 90 100 110 120 pF1KE3 FPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFV-QEIGSLR .... . : .:: .. :. .. .: XP_006 VEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASF--KFIDKNYPNLS 230 240 250 260 270 130 140 150 160 170 pF1KE3 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGL--LLIAWGLQRLKSLNLRS . .. :: :::::: : . :: : ::.:..: : . :: .: . . .:.. ::: . XP_006 HIYMADCKGITDSSL-RSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSN 280 290 300 310 320 330 180 190 200 210 220 230 pF1KE3 CRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFC : .:::... .:. : : .:. :.:..:..:: .. .: .. . :..... XP_006 CVRLSDASVMKLS-------ERCPNLNYLSLRNCEHLTAQGIGYI---VNIFSLVSIDLS 340 350 360 370 380 240 250 260 270 280 290 pF1KE3 G-GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSL : ::. :: ::. .:. :.. : :.: ::. . .:: : ::::.:....:. . XP_006 GTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMII 390 400 410 420 430 440 300 310 320 330 340 350 pF1KE3 AYIAQGLDGLKSLSLCSC-HISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS .: .: :::. .: .:.:.... . . : :. :.:. :: .::. :: . . XP_006 KALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCK 450 460 470 480 490 500 360 370 380 390 400 410 pF1KE3 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSS :: . . :: :.:.. .:.. XP_006 QLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDNITSSKGA 510 520 530 540 550 560 >-- initn: 261 init1: 117 opt: 237 Z-score: 266.7 bits: 58.8 E(85289): 4.1e-08 Smith-Waterman score: 237; 28.4% identity (59.6% similar) in 183 aa overlap (166-345:68-240) 140 150 160 170 180 190 pF1KE3 GRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTR : :. :. ::.:.: : : XP_006 TQLNSLWNAIDFSSVKNVIPDKYIVSTLQRWRLNVLR-LNFRGCL---------LRPKTF 40 50 60 70 80 200 210 220 230 240 250 pF1KE3 SAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSL .. : .:..:...:: .:: :..:::.: :. :::: . . : :. .: XP_006 RSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNL 90 100 110 120 130 140 260 270 280 290 300 310 pF1KE3 RSLNLRSCDNISDTGIMHLAMGS--LRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLC ..:.: : ..: :...: .:. .: ::.: : ... :.. :::.. :. :.. XP_006 QNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTIN 150 160 170 180 190 200 320 330 340 350 360 370 pF1KE3 SCH-ISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKR . ..:. .. .:.. . .: . .:.: XP_006 DMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASF 210 220 230 240 250 260 380 390 400 410 pF1KE3 GLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR XP_006 KFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPAS 270 280 290 300 310 320 >>XP_011514232 (OMIM: 609080) PREDICTED: F-box/LRR-repea (735 aa) initn: 469 init1: 150 opt: 362 Z-score: 402.8 bits: 84.3 E(85289): 1.1e-15 Smith-Waterman score: 415; 31.5% identity (64.0% similar) in 292 aa overlap (92-378:402-680) 70 80 90 100 110 120 pF1KE3 FPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFV-QEIGSLR .... . : .:: .. :. .. .: XP_011 VEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASF--KFIDKNYPNLS 380 390 400 410 420 130 140 150 160 170 pF1KE3 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGL--LLIAWGLQRLKSLNLRS . .. :: :::::: : . :: : ::.:..: : . :: .: . . .:.. ::: . XP_011 HIYMADCKGITDSSL-RSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSN 430 440 450 460 470 480 180 190 200 210 220 230 pF1KE3 CRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFC : .:::... .:. : : .:. :.:..:..:: .. .: .. . :..... XP_011 CVRLSDASVMKLS-------ERCPNLNYLSLRNCEHLTAQGIGYI---VNIFSLVSIDLS 490 500 510 520 530 240 250 260 270 280 290 pF1KE3 G-GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSL : ::. :: ::. .:. :.. : :.: ::. . .:: : ::::.:....:. . XP_011 GTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMII 540 550 560 570 580 590 300 310 320 330 340 350 pF1KE3 AYIAQGLDGLKSLSLCSC-HISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS .: .: :::. .: .:.:.... . . : :. :.:. :: .::. :: . . XP_011 KALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCK 600 610 620 630 640 650 360 370 380 390 400 410 pF1KE3 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSS :: . . :: :.:.. .:.. XP_011 QLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDNITSSKGA 660 670 680 690 700 710 >-- initn: 265 init1: 117 opt: 239 Z-score: 267.5 bits: 59.3 E(85289): 3.7e-08 Smith-Waterman score: 239; 25.2% identity (58.3% similar) in 242 aa overlap (111-345:162-391) 90 100 110 120 130 140 pF1KE3 SLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQ :..: . : .. .: :.. . . . XP_011 EESNFPERSSSEVFLVDETLKCDISLLPERAILQIFFYLSLKDVIICGQVNHAWM--LMT 140 150 160 170 180 150 160 170 180 190 pF1KE3 YLKGL-EVLELGGCSNITNTGLL---LIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRS :..: ....... .:. . : : :. :. ::.:.: : : XP_011 QLNSLWNAIDFSSVKNVIPDKYIVSTLQRWRLNVLR-LNFRGCL---------LRPKTFR 190 200 210 220 230 200 210 220 230 240 250 pF1KE3 AAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLR .. : .:..:...:: .:: :..:::.: :. :::: . . : :. .:. XP_011 SVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQ 240 250 260 270 280 290 260 270 280 290 300 310 pF1KE3 SLNLRSCDNISDTGIMHLAMGS--LRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCS .:.: : ..: :...: .:. .: ::.: : ... :.. :::.. :. :.. . XP_011 NLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTIND 300 310 320 330 340 350 320 330 340 350 360 370 pF1KE3 CH-ISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRG ..:. .. .:.. . .: . .:.: XP_011 MPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFK 360 370 380 390 400 410 380 390 400 410 pF1KE3 LERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR XP_011 FIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASM 420 430 440 450 460 470 >>XP_005250266 (OMIM: 609080) PREDICTED: F-box/LRR-repea (735 aa) initn: 469 init1: 150 opt: 362 Z-score: 402.8 bits: 84.3 E(85289): 1.1e-15 Smith-Waterman score: 415; 31.5% identity (64.0% similar) in 292 aa overlap (92-378:402-680) 70 80 90 100 110 120 pF1KE3 FPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFV-QEIGSLR .... . : .:: .. :. .. .: XP_005 VEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASF--KFIDKNYPNLS 380 390 400 410 420 130 140 150 160 170 pF1KE3 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGL--LLIAWGLQRLKSLNLRS . .. :: :::::: : . :: : ::.:..: : . :: .: . . .:.. ::: . XP_005 HIYMADCKGITDSSL-RSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSN 430 440 450 460 470 480 180 190 200 210 220 230 pF1KE3 CRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFC : .:::... .:. : : .:. :.:..:..:: .. .: .. . :..... XP_005 CVRLSDASVMKLS-------ERCPNLNYLSLRNCEHLTAQGIGYI---VNIFSLVSIDLS 490 500 510 520 530 240 250 260 270 280 290 pF1KE3 G-GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSL : ::. :: ::. .:. :.. : :.: ::. . .:: : ::::.:....:. . XP_005 GTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMII 540 550 560 570 580 590 300 310 320 330 340 350 pF1KE3 AYIAQGLDGLKSLSLCSC-HISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS .: .: :::. .: .:.:.... . . : :. :.:. :: .::. :: . . XP_005 KALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCK 600 610 620 630 640 650 360 370 380 390 400 410 pF1KE3 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSS :: . . :: :.:.. .:.. XP_005 QLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDNITSSKGA 660 670 680 690 700 710 >-- initn: 265 init1: 117 opt: 239 Z-score: 267.5 bits: 59.3 E(85289): 3.7e-08 Smith-Waterman score: 239; 25.2% identity (58.3% similar) in 242 aa overlap (111-345:162-391) 90 100 110 120 130 140 pF1KE3 SLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQ :..: . : .. .: :.. . . . XP_005 EESNFPERSSSEVFLVDETLKCDISLLPERAILQIFFYLSLKDVIICGQVNHAWM--LMT 140 150 160 170 180 150 160 170 180 190 pF1KE3 YLKGL-EVLELGGCSNITNTGLL---LIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRS :..: ....... .:. . : : :. :. ::.:.: : : XP_005 QLNSLWNAIDFSSVKNVIPDKYIVSTLQRWRLNVLR-LNFRGCL---------LRPKTFR 190 200 210 220 230 200 210 220 230 240 250 pF1KE3 AAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLR .. : .:..:...:: .:: :..:::.: :. :::: . . : :. .:. XP_005 SVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQ 240 250 260 270 280 290 260 270 280 290 300 310 pF1KE3 SLNLRSCDNISDTGIMHLAMGS--LRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCS .:.: : ..: :...: .:. .: ::.: : ... :.. :::.. :. :.. . XP_005 NLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTIND 300 310 320 330 340 350 320 330 340 350 360 370 pF1KE3 CH-ISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRG ..:. .. .:.. . .: . .:.: XP_005 MPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFK 360 370 380 390 400 410 380 390 400 410 pF1KE3 LERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR XP_005 FIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASM 420 430 440 450 460 470 418 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:28:20 2016 done: Sun Nov 6 08:28:21 2016 Total Scan time: 7.950 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]