FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3027, 151 aa
  1>>>pF1KE3027 151 - 151 aa - 151 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.6558+/-0.000709; mu= 6.2484+/- 0.043
 mean_var=105.2822+/-20.276, 0's: 0 Z-trim(112.6): 12  B-trim: 0 in 0/53
 Lambda= 0.124996
 statistics sampled from 13367 (13378) to 13367 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.411), width:  16
 Scan time:  1.800

The best scores are:                                      opt bits E(32554)
CCDS8450.1 SPA17 gene_id:53340|Hs108|chr11         ( 151)  981 186.3 5.9e-48


>>CCDS8450.1 SPA17 gene_id:53340|Hs108|chr11              (151 aa)
 initn: 981 init1: 981 opt: 981  Z-score: 974.4  bits: 186.3 E(32554): 5.9e-48
Smith-Waterman score: 981; 100.0% identity (100.0% similar) in 151 aa overlap (1-151:1-151)

               10        20        30        40        50        60
pF1KE3 MSIPFSNTHYRIPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREKTNFDPAEW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 MSIPFSNTHYRIPQGFGNLLEGLTREILREQPDNIPAFAAAYFESLLEKREKTNFDPAEW
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 GSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS84 GSKVEDRFYNNHAFEEQEPPEKSDPKQEESQISGKEEETSVTILDSSEEDKEKEEVAAVK
               70        80        90       100       110       120

              130       140       150 
pF1KE3 IQAAFRGHIAREEAKKMKTNSLQNEEKEENK
       :::::::::::::::::::::::::::::::
CCDS84 IQAAFRGHIAREEAKKMKTNSLQNEEKEENK
              130       140       150 




151 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 14:58:25 2016 done: Sun Nov  6 14:58:25 2016
 Total Scan time:  1.800 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]