FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1221, 243 aa 1>>>pF1KE1221 243 - 243 aa - 243 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.0813+/-0.000377; mu= 0.4309+/- 0.024 mean_var=307.3765+/-64.367, 0's: 0 Z-trim(124.5): 427 B-trim: 2124 in 2/57 Lambda= 0.073154 statistics sampled from 45930 (46397) to 45930 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.829), E-opt: 0.2 (0.544), width: 16 Scan time: 7.990 The best scores are: opt bits E(85289) NP_001265360 (OMIM: 605670,608752) complement C1q ( 243) 1733 195.1 9e-50 NP_056460 (OMIM: 605670,608752) complement C1q tum ( 243) 1733 195.1 9e-50 NP_001171271 (OMIM: 605441,612556) adiponectin pre ( 244) 537 68.9 9e-12 NP_004788 (OMIM: 605441,612556) adiponectin precur ( 244) 537 68.9 9e-12 NP_758957 (OMIM: 120575,613652) complement C1q sub ( 245) 524 67.6 2.3e-11 NP_001107573 (OMIM: 120575,613652) complement C1q ( 245) 524 67.6 2.3e-11 NP_001290067 (OMIM: 614285) complement C1q and tum ( 333) 495 64.6 2.4e-10 NP_001290066 (OMIM: 614285) complement C1q and tum ( 333) 495 64.6 2.4e-10 NP_848635 (OMIM: 614285) complement C1q and tumor ( 333) 495 64.6 2.4e-10 NP_001007538 (OMIM: 614148) complement C1q and tum ( 333) 484 63.5 5.3e-10 XP_011533372 (OMIM: 614148) PREDICTED: complement ( 333) 484 63.5 5.3e-10 XP_011540361 (OMIM: 120570,613652) PREDICTED: comp ( 253) 474 62.3 9.3e-10 NP_000482 (OMIM: 120570,613652) complement C1q sub ( 253) 474 62.3 9.3e-10 NP_057075 (OMIM: 120550,613652) complement C1q sub ( 245) 416 56.2 6.3e-08 NP_006679 (OMIM: 611586) C1q-related factor precur ( 258) 387 53.1 5.5e-07 NP_872334 (OMIM: 614330) complement C1q-like prote ( 287) 370 51.4 2e-06 NP_112207 (OMIM: 612045) complement C1q tumor necr ( 246) 356 49.8 5.1e-06 NP_852100 (OMIM: 612045) complement C1q tumor necr ( 319) 356 50.0 6.1e-06 NP_940996 (OMIM: 610365) complement C1q tumor necr ( 199) 301 43.9 0.00025 XP_016879615 (OMIM: 610365) PREDICTED: complement ( 199) 301 43.9 0.00025 XP_011538426 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 302 44.1 0.00027 XP_016872097 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 302 44.1 0.00027 NP_001092138 (OMIM: 178500,178642) pulmonary surfa ( 248) 302 44.1 0.00027 XP_011538427 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 302 44.1 0.00027 XP_005270189 (OMIM: 178500,178642) PREDICTED: pulm ( 248) 302 44.1 0.00027 NP_001307742 (OMIM: 178500,178642) pulmonary surfa ( 248) 302 44.1 0.00027 NP_001307743 (OMIM: 178500,178642) pulmonary surfa ( 258) 302 44.2 0.00027 XP_005270185 (OMIM: 178500,178642) PREDICTED: pulm ( 265) 302 44.2 0.00028 NP_940995 (OMIM: 610365) complement C1q tumor necr ( 281) 301 44.1 0.00031 NP_699203 (OMIM: 610365) complement C1q tumor necr ( 281) 301 44.1 0.00031 NP_112230 (OMIM: 610365) complement C1q tumor necr ( 281) 301 44.1 0.00031 XP_006714998 (OMIM: 610043) PREDICTED: collagen al ( 554) 307 45.1 0.00032 XP_006721729 (OMIM: 610365) PREDICTED: complement ( 291) 301 44.1 0.00032 XP_016865507 (OMIM: 610043) PREDICTED: collagen al ( 305) 301 44.1 0.00033 XP_006721727 (OMIM: 610365) PREDICTED: complement ( 330) 301 44.2 0.00035 XP_006721726 (OMIM: 610365) PREDICTED: complement ( 379) 301 44.2 0.00038 XP_011532994 (OMIM: 610043) PREDICTED: collagen al ( 472) 301 44.3 0.00044 NP_775736 (OMIM: 610043) collagen alpha-1(XXIII) c ( 540) 301 44.4 0.00048 NP_000081 (OMIM: 120180,130020,130050) collagen al (1466) 310 45.8 0.00048 XP_006714999 (OMIM: 610043) PREDICTED: collagen al ( 545) 301 44.4 0.00048 XP_011532991 (OMIM: 610043) PREDICTED: collagen al ( 548) 301 44.4 0.00049 XP_006714996 (OMIM: 610043) PREDICTED: collagen al ( 566) 301 44.4 0.0005 NP_001290039 (OMIM: 120130,175780,180000,607595,61 ( 519) 300 44.3 0.0005 XP_005246337 (OMIM: 104200,120070,141200,203780) P (1051) 303 44.9 0.00065 XP_011515191 (OMIM: 610026) PREDICTED: collagen al (1058) 303 44.9 0.00065 XP_016858784 (OMIM: 104200,120070,141200,203780) P (1119) 303 45.0 0.00067 XP_006712308 (OMIM: 104200,120070,141200,203780) P (1189) 303 45.0 0.0007 XP_011508858 (OMIM: 104200,120070,141200,203780) P (1257) 303 45.0 0.00073 XP_016868641 (OMIM: 610026) PREDICTED: collagen al (1264) 303 45.0 0.00073 XP_011515189 (OMIM: 610026) PREDICTED: collagen al (1264) 303 45.0 0.00073 >>NP_001265360 (OMIM: 605670,608752) complement C1q tumo (243 aa) initn: 1733 init1: 1733 opt: 1733 Z-score: 1014.5 bits: 195.1 E(85289): 9e-50 Smith-Waterman score: 1733; 100.0% identity (100.0% similar) in 243 aa overlap (1-243:1-243) 10 20 30 40 50 60 pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 APLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 APLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 FFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSDWHSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSDWHSSP 190 200 210 220 230 240 pF1KE1 VFA ::: NP_001 VFA >>NP_056460 (OMIM: 605670,608752) complement C1q tumor n (243 aa) initn: 1733 init1: 1733 opt: 1733 Z-score: 1014.5 bits: 195.1 E(85289): 9e-50 Smith-Waterman score: 1733; 100.0% identity (100.0% similar) in 243 aa overlap (1-243:1-243) 10 20 30 40 50 60 pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDGRDGRDGAPG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 APGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVPPPSD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 APLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 APLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASLQFDLVKNGESIASFFQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 FFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSDWHSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 FFGGWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASIKTDSTFSGFLVYSDWHSSP 190 200 210 220 230 240 pF1KE1 VFA ::: NP_056 VFA >>NP_001171271 (OMIM: 605441,612556) adiponectin precurs (244 aa) initn: 405 init1: 224 opt: 537 Z-score: 332.3 bits: 68.9 E(85289): 9e-12 Smith-Waterman score: 559; 43.3% identity (61.9% similar) in 247 aa overlap (6-235:7-242) 10 20 30 40 50 pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPS-LCPGHPG-----LPGTPGHHGSQGLPGRDGRD :::::.: : .. :. : : : . : ::: : .: ::::::: NP_001 MLLLGAVLLLLALP-GHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAPGRDGRD 10 20 30 40 50 60 70 80 90 100 pF1KE1 GRDGAPGAPGEKGEGGRPGLPGPRGD------PG---PRGEAGPAGPTGPAGECSVPPRS : .:::::: : ::: ::.:: :: ::: : : : :: . :: NP_001 G------TPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRS 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 AFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASL :::. :. : : . :. : ... :.:.:::. :::: :..::.:::: : ::: .. NP_001 AFSVGL-ETYVTIP-NMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKDV 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 QFDLVKNGESIA-SFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQV-GVGDYIGIYASIK . .: :. ... .. :. . : ::.....:: ::::.:: : :. :.::. NP_001 KVSLFKKDKAMLFTYDQYQENNVDQA--SGSVLLHLEVGDQVWLQVYGEGERNGLYADND 180 190 200 210 220 230 240 pF1KE1 TDSTFSGFLVYSDWHSSPVFA .::::.:::.: : NP_001 NDSTFTGFLLYHDTN 230 240 >>NP_004788 (OMIM: 605441,612556) adiponectin precursor (244 aa) initn: 405 init1: 224 opt: 537 Z-score: 332.3 bits: 68.9 E(85289): 9e-12 Smith-Waterman score: 559; 43.3% identity (61.9% similar) in 247 aa overlap (6-235:7-242) 10 20 30 40 50 pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPS-LCPGHPG-----LPGTPGHHGSQGLPGRDGRD :::::.: : .. :. : : : . : ::: : .: ::::::: NP_004 MLLLGAVLLLLALP-GHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAPGRDGRD 10 20 30 40 50 60 70 80 90 100 pF1KE1 GRDGAPGAPGEKGEGGRPGLPGPRGD------PG---PRGEAGPAGPTGPAGECSVPPRS : .:::::: : ::: ::.:: :: ::: : : : :: . :: NP_004 G------TPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRS 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 AFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRASL :::. :. : : . :. : ... :.:.:::. :::: :..::.:::: : ::: .. NP_004 AFSVGL-ETYVTIP-NMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKDV 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 QFDLVKNGESIA-SFFQFFGGWPKPASLSGGAMVRLEPEDQVWVQV-GVGDYIGIYASIK . .: :. ... .. :. . : ::.....:: ::::.:: : :. :.::. NP_004 KVSLFKKDKAMLFTYDQYQENNVDQA--SGSVLLHLEVGDQVWLQVYGEGERNGLYADND 180 190 200 210 220 230 240 pF1KE1 TDSTFSGFLVYSDWHSSPVFA .::::.:::.: : NP_004 NDSTFTGFLLYHDTN 230 240 >>NP_758957 (OMIM: 120575,613652) complement C1q subcomp (245 aa) initn: 627 init1: 256 opt: 524 Z-score: 324.9 bits: 67.6 E(85289): 2.3e-11 Smith-Waterman score: 533; 40.7% identity (62.2% similar) in 246 aa overlap (1-235:13-245) 10 20 30 40 pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPG .. ::.:::: : :. :: : :::::.::. : .:::: NP_758 MDVGPSSLPHLGLKLLLLLLLLPLR-GQANTGCYGIP----GMPGLPGAPGKDGYDGLPG 10 20 30 40 50 50 60 70 80 90 100 pF1KE1 RDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPP------ :. : . :: : ::. :.::::: : :: : : : :: : . : NP_758 PKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYK 60 70 80 90 100 110 110 120 130 140 150 pF1KE1 ---RSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATV .:.:.. : ... :: .. . :. ::.: :: ::. ::::::.:::.:::. ::. NP_758 QKFQSVFTVTR-QTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS- 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE1 YRASLQFDLVKNGESIASFFQFFGGWPKPASL-SGGAMVRLEPEDQVWVQVG-VGDYIGI . :.: : ..: ....: : : .. :::...::. ..::. :. :..:: NP_758 HTANLCVLLYRSGVKVVTFC---GHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGI 180 190 200 210 220 230 220 230 240 pF1KE1 YASIKTDSTFSGFLVYSDWHSSPVFA .: ::.:::::.. : NP_758 QGS---DSVFSGFLLFPD 240 >>NP_001107573 (OMIM: 120575,613652) complement C1q subc (245 aa) initn: 627 init1: 256 opt: 524 Z-score: 324.9 bits: 67.6 E(85289): 2.3e-11 Smith-Waterman score: 533; 40.7% identity (62.2% similar) in 246 aa overlap (1-235:13-245) 10 20 30 40 pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPG .. ::.:::: : :. :: : :::::.::. : .:::: NP_001 MDVGPSSLPHLGLKLLLLLLLLPLR-GQANTGCYGIP----GMPGLPGAPGKDGYDGLPG 10 20 30 40 50 50 60 70 80 90 100 pF1KE1 RDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPP------ :. : . :: : ::. :.::::: : :: : : : :: : . : NP_001 PKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYK 60 70 80 90 100 110 110 120 130 140 150 pF1KE1 ---RSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATV .:.:.. : ... :: .. . :. ::.: :: ::. ::::::.:::.:::. ::. NP_001 QKFQSVFTVTR-QTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHAS- 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE1 YRASLQFDLVKNGESIASFFQFFGGWPKPASL-SGGAMVRLEPEDQVWVQVG-VGDYIGI . :.: : ..: ....: : : .. :::...::. ..::. :. :..:: NP_001 HTANLCVLLYRSGVKVVTFC---GHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGI 180 190 200 210 220 230 220 230 240 pF1KE1 YASIKTDSTFSGFLVYSDWHSSPVFA .: ::.:::::.. : NP_001 QGS---DSVFSGFLLFPD 240 >>NP_001290067 (OMIM: 614285) complement C1q and tumor n (333 aa) initn: 412 init1: 355 opt: 495 Z-score: 306.8 bits: 64.6 E(85289): 2.4e-10 Smith-Waterman score: 521; 39.7% identity (59.0% similar) in 239 aa overlap (15-234:95-331) 10 20 30 40 pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQ ::: : . :. :: : : .:.. NP_001 GKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQK 70 80 90 100 110 120 50 60 70 80 90 pF1KE1 GLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTG-PA-------- : : : : .: : : : : :: :: : :::.:::::.:: : :. NP_001 GNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWK 130 140 150 160 170 180 100 110 120 130 140 pF1KE1 ---------GECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQ :: : :.:::.. . : :: :. ::..: :: .:::...:::::. NP_001 GDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCH 190 200 210 220 230 240 150 160 170 180 190 200 pF1KE1 VPGVYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVW . :::::. : ::. ..: .::::: .: . . . :: :: ...:. :.:: NP_001 IAGVYYFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQAS--GGIVLQLKLGDEVW 250 260 270 280 290 300 210 220 230 240 pF1KE1 VQVGVGD-YIGIYASIKTDSTFSGFLVYSDWHSSPVFA .:: :. . :..:. :.::.:::..: NP_001 LQVTGGERFNGLFADEDDDTTFTGFLLFSSP 310 320 330 >>NP_001290066 (OMIM: 614285) complement C1q and tumor n (333 aa) initn: 412 init1: 355 opt: 495 Z-score: 306.8 bits: 64.6 E(85289): 2.4e-10 Smith-Waterman score: 521; 39.7% identity (59.0% similar) in 239 aa overlap (15-234:95-331) 10 20 30 40 pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQ ::: : . :. :: : : .:.. NP_001 GKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQK 70 80 90 100 110 120 50 60 70 80 90 pF1KE1 GLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTG-PA-------- : : : : .: : : : : :: :: : :::.:::::.:: : :. NP_001 GNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWK 130 140 150 160 170 180 100 110 120 130 140 pF1KE1 ---------GECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQ :: : :.:::.. . : :: :. ::..: :: .:::...:::::. NP_001 GDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCH 190 200 210 220 230 240 150 160 170 180 190 200 pF1KE1 VPGVYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVW . :::::. : ::. ..: .::::: .: . . . :: :: ...:. :.:: NP_001 IAGVYYFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQAS--GGIVLQLKLGDEVW 250 260 270 280 290 300 210 220 230 240 pF1KE1 VQVGVGD-YIGIYASIKTDSTFSGFLVYSDWHSSPVFA .:: :. . :..:. :.::.:::..: NP_001 LQVTGGERFNGLFADEDDDTTFTGFLLFSSP 310 320 330 >>NP_848635 (OMIM: 614285) complement C1q and tumor necr (333 aa) initn: 412 init1: 355 opt: 495 Z-score: 306.8 bits: 64.6 E(85289): 2.4e-10 Smith-Waterman score: 521; 39.7% identity (59.0% similar) in 239 aa overlap (15-234:95-331) 10 20 30 40 pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQ ::: : . :. :: : : .:.. NP_848 GKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQK 70 80 90 100 110 120 50 60 70 80 90 pF1KE1 GLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTG-PA-------- : : : : .: : : : : :: :: : :::.:::::.:: : :. NP_848 GNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWK 130 140 150 160 170 180 100 110 120 130 140 pF1KE1 ---------GECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQ :: : :.:::.. . : :: :. ::..: :: .:::...:::::. NP_848 GDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCH 190 200 210 220 230 240 150 160 170 180 190 200 pF1KE1 VPGVYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVW . :::::. : ::. ..: .::::: .: . . . :: :: ...:. :.:: NP_848 IAGVYYFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQAS--GGIVLQLKLGDEVW 250 260 270 280 290 300 210 220 230 240 pF1KE1 VQVGVGD-YIGIYASIKTDSTFSGFLVYSDWHSSPVFA .:: :. . :..:. :.::.:::..: NP_848 LQVTGGERFNGLFADEDDDTTFTGFLLFSSP 310 320 330 >>NP_001007538 (OMIM: 614148) complement C1q and tumor n (333 aa) initn: 426 init1: 356 opt: 484 Z-score: 300.5 bits: 63.5 E(85289): 5.3e-10 Smith-Waterman score: 510; 38.9% identity (59.4% similar) in 239 aa overlap (15-234:95-331) 10 20 30 40 pF1KE1 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQ ::: : . :. :: : : .:.. NP_001 GKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQK 70 80 90 100 110 120 50 60 70 80 90 pF1KE1 GLPGRDGRDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTG-PA-------- : : : : .: : : : : :: :: : :::.:::::.:: : :. NP_001 GNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWK 130 140 150 160 170 180 100 110 120 130 140 pF1KE1 ---------GECSVPPRSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQ :: : :.:::.. . : ::.:. ::..: :: .:::...:::::. NP_001 GDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDVPIKFDKILYNEFNHYDTAVGKFTCH 190 200 210 220 230 240 150 160 170 180 190 200 pF1KE1 VPGVYYFAVHATVYRASLQFDLVKNGESIASFFQFFGGWPKPASLSGGAMVRLEPEDQVW . :::::. : ::. ..: .::::: .: . . . :: :. ...:. :..: NP_001 IAGVYYFTYHITVFSRNVQVSLVKNGVKILHTRDAYVSSEDQAS--GSIVLQLKLGDEMW 250 260 270 280 290 300 210 220 230 240 pF1KE1 VQVGVGD-YIGIYASIKTDSTFSGFLVYSDWHSSPVFA .:: :. . :..:. :.::.:::..: NP_001 LQVTGGERFNGLFADEDDDTTFTGFLLFSSQ 310 320 330 243 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 14:58:50 2016 done: Sun Nov 6 14:58:51 2016 Total Scan time: 7.990 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]