FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4387, 408 aa 1>>>pF1KE4387 408 - 408 aa - 408 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6191+/-0.000441; mu= 21.0701+/- 0.027 mean_var=63.7686+/-13.691, 0's: 0 Z-trim(109.3): 27 B-trim: 0 in 0/48 Lambda= 0.160609 statistics sampled from 17430 (17443) to 17430 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.546), E-opt: 0.2 (0.205), width: 16 Scan time: 8.120 The best scores are: opt bits E(85289) NP_001373 (OMIM: 191350,608093,614750) UDP-N-acety ( 408) 2711 637.3 2e-182 XP_005271479 (OMIM: 191350,608093,614750) PREDICTE ( 434) 2586 608.4 1.1e-173 XP_016872782 (OMIM: 191350,608093,614750) PREDICTE ( 301) 1978 467.4 2.1e-131 XP_011540950 (OMIM: 191350,608093,614750) PREDICTE ( 327) 1853 438.4 1.2e-122 XP_016872783 (OMIM: 191350,608093,614750) PREDICTE ( 242) 1625 385.5 7.6e-107 XP_016872784 (OMIM: 191350,608093,614750) PREDICTE ( 236) 1542 366.2 4.6e-101 >>NP_001373 (OMIM: 191350,608093,614750) UDP-N-acetylglu (408 aa) initn: 2711 init1: 2711 opt: 2711 Z-score: 3396.1 bits: 637.3 E(85289): 2e-182 Smith-Waterman score: 2711; 100.0% identity (100.0% similar) in 408 aa overlap (1-408:1-408) 10 20 30 40 50 60 pF1KE4 MWAFSELPMPLLINLIVSLLGFVATVTLIPAFRGHFIAARLCGQDLNKTSRQQIPESQGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MWAFSELPMPLLINLIVSLLGFVATVTLIPAFRGHFIAARLCGQDLNKTSRQQIPESQGV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 ISGAVFLIILFCFIPFPFLNCFVKEQCKAFPHHEFVALIGALLAICCMIFLGFADDVLNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ISGAVFLIILFCFIPFPFLNCFVKEQCKAFPHHEFVALIGALLAICCMIFLGFADDVLNL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RWRHKLLLPTAASLPLLMVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RWRHKLLLPTAASLPLLMVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 TNAINILAGINGLEAGQSLVISASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TNAINILAGINGLEAGQSLVISASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 HNWYPSRVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HNWYPSRVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 RHRIPRLNIKTGKLEMSYSKFKTKSLSFLGTFILKVAESLQLVTVHQSETEDGEFTECNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RHRIPRLNIKTGKLEMSYSKFKTKSLSFLGTFILKVAESLQLVTVHQSETEDGEFTECNN 310 320 330 340 350 360 370 380 390 400 pF1KE4 MTLINLLLKVLGPIHERNLTLLLLLLQILGSAITFSIRYQLVRLFYDV :::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MTLINLLLKVLGPIHERNLTLLLLLLQILGSAITFSIRYQLVRLFYDV 370 380 390 400 >>XP_005271479 (OMIM: 191350,608093,614750) PREDICTED: U (434 aa) initn: 2611 init1: 2586 opt: 2586 Z-score: 3239.2 bits: 608.4 E(85289): 1.1e-173 Smith-Waterman score: 2649; 94.0% identity (94.0% similar) in 434 aa overlap (1-408:1-434) 10 20 30 40 50 60 pF1KE4 MWAFSELPMPLLINLIVSLLGFVATVTLIPAFRGHFIAARLCGQDLNKTSRQQIPESQGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MWAFSELPMPLLINLIVSLLGFVATVTLIPAFRGHFIAARLCGQDLNKTSRQQIPESQGV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 ISGAVFLIILFCFIPFPFLNCFVKEQCKAFPHHEFVALIGALLAICCMIFLGFADDVLNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ISGAVFLIILFCFIPFPFLNCFVKEQCKAFPHHEFVALIGALLAICCMIFLGFADDVLNL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RWRHKLLLPTAASLPLLMVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RWRHKLLLPTAASLPLLMVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 TNAINILAGINGLEAGQSLVISASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TNAINILAGINGLEAGQSLVISASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 HNWYPSRVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 HNWYPSRVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 RHRIPRLNIKTGKLEMSYSKFKTKSLSFLGTFILKVAESLQLVTVHQSETEDGEFTECNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RHRIPRLNIKTGKLEMSYSKFKTKSLSFLGTFILKVAESLQLVTVHQSETEDGEFTECNN 310 320 330 340 350 360 370 380 390 pF1KE4 MTLINLLLKVLGPIHERNLTLLLLLLQ--------------------------ILGSAIT ::::::::::::::::::::::::::: ::::::: XP_005 MTLINLLLKVLGPIHERNLTLLLLLLQVRMGIEFIPPCLPFCVILTPVHFSLQILGSAIT 370 380 390 400 410 420 400 pF1KE4 FSIRYQLVRLFYDV :::::::::::::: XP_005 FSIRYQLVRLFYDV 430 >>XP_016872782 (OMIM: 191350,608093,614750) PREDICTED: U (301 aa) initn: 1978 init1: 1978 opt: 1978 Z-score: 2480.0 bits: 467.4 E(85289): 2.1e-131 Smith-Waterman score: 1978; 100.0% identity (100.0% similar) in 301 aa overlap (108-408:1-301) 80 90 100 110 120 130 pF1KE4 FLNCFVKEQCKAFPHHEFVALIGALLAICCMIFLGFADDVLNLRWRHKLLLPTAASLPLL :::::::::::::::::::::::::::::: XP_016 MIFLGFADDVLNLRWRHKLLLPTAASLPLL 10 20 30 140 150 160 170 180 190 pF1KE4 MVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFCTNAINILAGINGLEAGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFCTNAINILAGINGLEAGQ 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE4 SLVISASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLYHNWYPSRVFVGDTFCYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SLVISASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLYHNWYPSRVFVGDTFCYF 100 110 120 130 140 150 260 270 280 290 300 310 pF1KE4 AGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCPRHRIPRLNIKTGKLEMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCPRHRIPRLNIKTGKLEMS 160 170 180 190 200 210 320 330 340 350 360 370 pF1KE4 YSKFKTKSLSFLGTFILKVAESLQLVTVHQSETEDGEFTECNNMTLINLLLKVLGPIHER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YSKFKTKSLSFLGTFILKVAESLQLVTVHQSETEDGEFTECNNMTLINLLLKVLGPIHER 220 230 240 250 260 270 380 390 400 pF1KE4 NLTLLLLLLQILGSAITFSIRYQLVRLFYDV ::::::::::::::::::::::::::::::: XP_016 NLTLLLLLLQILGSAITFSIRYQLVRLFYDV 280 290 300 >>XP_011540950 (OMIM: 191350,608093,614750) PREDICTED: U (327 aa) initn: 1853 init1: 1853 opt: 1853 Z-score: 2322.9 bits: 438.4 E(85289): 1.2e-122 Smith-Waterman score: 1916; 92.0% identity (92.0% similar) in 327 aa overlap (108-408:1-327) 80 90 100 110 120 130 pF1KE4 FLNCFVKEQCKAFPHHEFVALIGALLAICCMIFLGFADDVLNLRWRHKLLLPTAASLPLL :::::::::::::::::::::::::::::: XP_011 MIFLGFADDVLNLRWRHKLLLPTAASLPLL 10 20 30 140 150 160 170 180 190 pF1KE4 MVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFCTNAINILAGINGLEAGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFCTNAINILAGINGLEAGQ 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE4 SLVISASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLYHNWYPSRVFVGDTFCYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SLVISASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLYHNWYPSRVFVGDTFCYF 100 110 120 130 140 150 260 270 280 290 300 310 pF1KE4 AGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCPRHRIPRLNIKTGKLEMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCPRHRIPRLNIKTGKLEMS 160 170 180 190 200 210 320 330 340 350 360 370 pF1KE4 YSKFKTKSLSFLGTFILKVAESLQLVTVHQSETEDGEFTECNNMTLINLLLKVLGPIHER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YSKFKTKSLSFLGTFILKVAESLQLVTVHQSETEDGEFTECNNMTLINLLLKVLGPIHER 220 230 240 250 260 270 380 390 400 pF1KE4 NLTLLLLLLQ--------------------------ILGSAITFSIRYQLVRLFYDV :::::::::: ::::::::::::::::::::: XP_011 NLTLLLLLLQVRMGIEFIPPCLPFCVILTPVHFSLQILGSAITFSIRYQLVRLFYDV 280 290 300 310 320 >>XP_016872783 (OMIM: 191350,608093,614750) PREDICTED: U (242 aa) initn: 1625 init1: 1625 opt: 1625 Z-score: 2039.2 bits: 385.5 E(85289): 7.6e-107 Smith-Waterman score: 1625; 100.0% identity (100.0% similar) in 242 aa overlap (1-242:1-242) 10 20 30 40 50 60 pF1KE4 MWAFSELPMPLLINLIVSLLGFVATVTLIPAFRGHFIAARLCGQDLNKTSRQQIPESQGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MWAFSELPMPLLINLIVSLLGFVATVTLIPAFRGHFIAARLCGQDLNKTSRQQIPESQGV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 ISGAVFLIILFCFIPFPFLNCFVKEQCKAFPHHEFVALIGALLAICCMIFLGFADDVLNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ISGAVFLIILFCFIPFPFLNCFVKEQCKAFPHHEFVALIGALLAICCMIFLGFADDVLNL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RWRHKLLLPTAASLPLLMVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RWRHKLLLPTAASLPLLMVYFTNFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 TNAINILAGINGLEAGQSLVISASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TNAINILAGINGLEAGQSLVISASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 HNWYPSRVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCP :: XP_016 HN >>XP_016872784 (OMIM: 191350,608093,614750) PREDICTED: U (236 aa) initn: 1542 init1: 1542 opt: 1542 Z-score: 1935.4 bits: 366.2 E(85289): 4.6e-101 Smith-Waterman score: 1542; 100.0% identity (100.0% similar) in 236 aa overlap (173-408:1-236) 150 160 170 180 190 200 pF1KE4 NFGNTTIVVPKPFRPILGLHLDLGILYYVYMGLLAVFCTNAINILAGINGLEAGQSLVIS :::::::::::::::::::::::::::::: XP_016 MGLLAVFCTNAINILAGINGLEAGQSLVIS 10 20 30 210 220 230 240 250 260 pF1KE4 ASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLYHNWYPSRVFVGDTFCYFAGMTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ASIIVFNLVELEGDCRDDHVFSLYFMIPFFFTTLGLLYHNWYPSRVFVGDTFCYFAGMTF 40 50 60 70 80 90 270 280 290 300 310 320 pF1KE4 AVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCPRHRIPRLNIKTGKLEMSYSKFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AVVGILGHFSKTMLLFFMPQVFNFLYSLPQLLHIIPCPRHRIPRLNIKTGKLEMSYSKFK 100 110 120 130 140 150 330 340 350 360 370 380 pF1KE4 TKSLSFLGTFILKVAESLQLVTVHQSETEDGEFTECNNMTLINLLLKVLGPIHERNLTLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TKSLSFLGTFILKVAESLQLVTVHQSETEDGEFTECNNMTLINLLLKVLGPIHERNLTLL 160 170 180 190 200 210 390 400 pF1KE4 LLLLQILGSAITFSIRYQLVRLFYDV :::::::::::::::::::::::::: XP_016 LLLLQILGSAITFSIRYQLVRLFYDV 220 230 408 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:57:01 2016 done: Sat Nov 5 22:57:02 2016 Total Scan time: 8.120 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]