FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5148, 64 aa 1>>>pF1KE5148 64 - 64 aa - 64 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.1579+/-0.000431; mu= 11.5959+/- 0.026 mean_var=41.1537+/- 8.173, 0's: 0 Z-trim(115.1): 17 B-trim: 15 in 1/50 Lambda= 0.199926 statistics sampled from 15653 (15670) to 15653 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.856), E-opt: 0.2 (0.481), width: 16 Scan time: 1.310 The best scores are: opt bits E(32554) CCDS8385.1 FXYD2 gene_id:486|Hs108|chr11 ( 64) 449 135.1 2.9e-33 CCDS8386.1 FXYD2 gene_id:486|Hs108|chr11 ( 66) 399 120.6 6.6e-29 CCDS73400.1 FXYD2 gene_id:100533181|Hs108|chr11 ( 144) 399 120.8 1.3e-28 CCDS12445.1 FXYD1 gene_id:5348|Hs108|chr19 ( 92) 194 61.6 5.5e-11 >>CCDS8385.1 FXYD2 gene_id:486|Hs108|chr11 (64 aa) initn: 449 init1: 449 opt: 449 Z-score: 710.6 bits: 135.1 E(32554): 2.9e-33 Smith-Waterman score: 449; 100.0% identity (100.0% similar) in 64 aa overlap (1-64:1-64) 10 20 30 40 50 60 pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQIN 10 20 30 40 50 60 pF1KE5 EDEP :::: CCDS83 EDEP >>CCDS8386.1 FXYD2 gene_id:486|Hs108|chr11 (66 aa) initn: 399 init1: 399 opt: 399 Z-score: 632.4 bits: 120.6 E(32554): 6.6e-29 Smith-Waterman score: 399; 100.0% identity (100.0% similar) in 58 aa overlap (7-64:9-66) 10 20 30 40 50 pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQ :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS83 MTGLSMDGGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRRFRCGGNKKRRQ 10 20 30 40 50 60 60 pF1KE5 INEDEP :::::: CCDS83 INEDEP >>CCDS73400.1 FXYD2 gene_id:100533181|Hs108|chr11 (144 aa) initn: 399 init1: 399 opt: 399 Z-score: 627.4 bits: 120.8 E(32554): 1.3e-28 Smith-Waterman score: 399; 100.0% identity (100.0% similar) in 58 aa overlap (7-64:87-144) 10 20 30 pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAF :::::::::::::::::::::::::::::: CCDS73 LSRRCKCSFNQKPRNRAPESRELKCSHQVEGGSPKGDVDPFYYDYETVRNGGLIFAGLAF 60 70 80 90 100 110 40 50 60 pF1KE5 IVGLLILLSRRFRCGGNKKRRQINEDEP :::::::::::::::::::::::::::: CCDS73 IVGLLILLSRRFRCGGNKKRRQINEDEP 120 130 140 >>CCDS12445.1 FXYD1 gene_id:5348|Hs108|chr19 (92 aa) initn: 187 init1: 187 opt: 194 Z-score: 310.7 bits: 61.6 E(32554): 5.5e-11 Smith-Waterman score: 194; 52.7% identity (80.0% similar) in 55 aa overlap (9-63:22-75) 10 20 30 40 pF1KE5 MDRWYLGGSPKGDVDPFYYDYETVRNGGLIFAGLAFIVGLLILLSRR ::: . ::: :::.... :::..::. ::.:.::.:::: CCDS12 MASLGHILVFCVGLLTMAKAESPK-EHDPFTYDYQSLQIGGLVIAGILFILGILIVLSRR 10 20 30 40 50 50 60 pF1KE5 FRCGGNKKRRQINEDEP :: :...: . :: CCDS12 CRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR 60 70 80 90 64 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 21:59:09 2016 done: Mon Nov 7 21:59:09 2016 Total Scan time: 1.310 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]