FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2423, 278 aa 1>>>pF1KE2423 278 - 278 aa - 278 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.2211+/-0.000819; mu= 12.1006+/- 0.049 mean_var=100.8537+/-19.676, 0's: 0 Z-trim(109.4): 13 B-trim: 86 in 1/52 Lambda= 0.127711 statistics sampled from 10877 (10882) to 10877 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.334), width: 16 Scan time: 2.020 The best scores are: opt bits E(32554) CCDS8293.1 TAF1D gene_id:79101|Hs108|chr11 ( 278) 1828 346.8 1e-95 >>CCDS8293.1 TAF1D gene_id:79101|Hs108|chr11 (278 aa) initn: 1828 init1: 1828 opt: 1828 Z-score: 1831.9 bits: 346.8 E(32554): 1e-95 Smith-Waterman score: 1828; 100.0% identity (100.0% similar) in 278 aa overlap (1-278:1-278) 10 20 30 40 50 60 pF1KE2 MDKSGIDSLDHVTSDAVELANRSDNSSDSSLFKTQCIPYSPKGEKRNPIRKFVRTPESVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MDKSGIDSLDHVTSDAVELANRSDNSSDSSLFKTQCIPYSPKGEKRNPIRKFVRTPESVH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ASDSSSDSSFEPIPLTIKAIFERFKNRKKRYKKKKKRRYQPTGRPRGRPEGRRNPIYSLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 ASDSSSDSSFEPIPLTIKAIFERFKNRKKRYKKKKKRRYQPTGRPRGRPEGRRNPIYSLI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 DKKKQFRSRGSGFPFLESENEKNAPWRKILTFEQAVARGFFNYIEKLKYEHHLKESLKQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 DKKKQFRSRGSGFPFLESENEKNAPWRKILTFEQAVARGFFNYIEKLKYEHHLKESLKQM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 NVGEDLENEDFDSRRYKFLDDDGSISPIEESTAEDEDATHLEDNECDIKLAGDSFIVSSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 NVGEDLENEDFDSRRYKFLDDDGSISPIEESTAEDEDATHLEDNECDIKLAGDSFIVSSE 190 200 210 220 230 240 250 260 270 pF1KE2 FPVRLSVYLEEEDITEEAALSKKRATKAKNTGQRGLKM :::::::::::::::::::::::::::::::::::::: CCDS82 FPVRLSVYLEEEDITEEAALSKKRATKAKNTGQRGLKM 250 260 270 278 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 19:44:10 2016 done: Mon Nov 7 19:44:10 2016 Total Scan time: 2.020 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]