FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1135, 353 aa 1>>>pF1KE1135 353 - 353 aa - 353 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.9907+/-0.000391; mu= 7.7661+/- 0.024 mean_var=138.4063+/-30.563, 0's: 0 Z-trim(116.8): 247 B-trim: 1259 in 1/52 Lambda= 0.109018 statistics sampled from 27848 (28210) to 27848 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.331), width: 16 Scan time: 7.660 The best scores are: opt bits E(85289) NP_001305407 (OMIM: 608015) tsukushin isoform b pr ( 353) 2343 380.2 3.8e-105 NP_001245139 (OMIM: 608015) tsukushin isoform b pr ( 353) 2343 380.2 3.8e-105 NP_056331 (OMIM: 608015) tsukushin isoform b precu ( 353) 2343 380.2 3.8e-105 NP_001305408 (OMIM: 608015) tsukushin isoform b pr ( 353) 2343 380.2 3.8e-105 NP_001305406 (OMIM: 608015) tsukushin isoform a pr ( 367) 2343 380.2 3.9e-105 XP_005244884 (OMIM: 605492) PREDICTED: leucine-ric ( 713) 337 64.9 6.1e-10 NP_006329 (OMIM: 605492) leucine-rich repeat neuro ( 713) 337 64.9 6.1e-10 XP_016855539 (OMIM: 605492) PREDICTED: leucine-ric ( 713) 337 64.9 6.1e-10 NP_963924 (OMIM: 605492) leucine-rich repeat neuro ( 713) 337 64.9 6.1e-10 XP_011507368 (OMIM: 605492) PREDICTED: leucine-ric ( 713) 337 64.9 6.1e-10 NP_004479 (OMIM: 173511) platelet glycoprotein V p ( 560) 293 57.9 6.2e-08 NP_443204 (OMIM: 611289) leucine-rich alpha-2-glyc ( 347) 283 56.2 1.3e-07 NP_004961 (OMIM: 601489,615961) insulin-like growt ( 605) 285 56.7 1.6e-07 NP_001139478 (OMIM: 601489,615961) insulin-like gr ( 643) 285 56.7 1.6e-07 XP_016857485 (OMIM: 606653) PREDICTED: leucine-ric ( 876) 275 55.2 6.2e-07 XP_011508141 (OMIM: 606653) PREDICTED: leucine-ric ( 900) 275 55.3 6.3e-07 NP_001264156 (OMIM: 606667) leucine-rich repeat-co ( 835) 274 55.1 6.6e-07 XP_005273960 (OMIM: 137207) PREDICTED: leucine-ric ( 640) 271 54.5 7.5e-07 XP_011543237 (OMIM: 137207) PREDICTED: leucine-ric ( 662) 271 54.5 7.7e-07 XP_016873016 (OMIM: 137207) PREDICTED: leucine-ric ( 662) 271 54.5 7.7e-07 NP_005503 (OMIM: 137207) leucine-rich repeat-conta ( 662) 271 54.5 7.7e-07 XP_005273959 (OMIM: 137207) PREDICTED: leucine-ric ( 662) 271 54.5 7.7e-07 NP_001122394 (OMIM: 137207) leucine-rich repeat-co ( 662) 271 54.5 7.7e-07 NP_612449 (OMIM: 608843) vasorin precursor [Homo s ( 673) 265 53.6 1.5e-06 XP_011538979 (OMIM: 608661) PREDICTED: podocan iso ( 402) 251 51.2 4.7e-06 NP_060150 (OMIM: 603932,607850,608135) asporin iso ( 379) 250 51.0 5e-06 XP_005270514 (OMIM: 608661) PREDICTED: podocan iso ( 613) 251 51.4 6.4e-06 NP_001186010 (OMIM: 608661) podocan isoform 2 [Hom ( 642) 251 51.4 6.7e-06 NP_001186009 (OMIM: 608661) podocan isoform 2 [Hom ( 642) 251 51.4 6.7e-06 XP_016855783 (OMIM: 608661) PREDICTED: podocan iso ( 652) 251 51.4 6.7e-06 NP_714914 (OMIM: 608661) podocan isoform 1 [Homo s ( 661) 251 51.4 6.8e-06 NP_003658 (OMIM: 606667) leucine-rich repeat-conta ( 907) 249 51.2 1.1e-05 NP_001180264 (OMIM: 603932,607850,608135) asporin ( 242) 234 48.4 2e-05 NP_001264155 (OMIM: 606667) leucine-rich repeat-co ( 883) 238 49.4 3.5e-05 XP_005271426 (OMIM: 608869,615112) PREDICTED: leuc ( 958) 237 49.3 4.2e-05 XP_011542154 (OMIM: 605352) PREDICTED: malignant f (1003) 237 49.3 4.3e-05 NP_004216 (OMIM: 605352) malignant fibrous histioc (1052) 237 49.3 4.5e-05 NP_055628 (OMIM: 608869,615112) leucine-rich repea (1065) 237 49.3 4.5e-05 NP_001255968 (OMIM: 602775,607721) leucine-rich re ( 536) 232 48.3 4.6e-05 NP_001299615 (OMIM: 608869,615112) leucine-rich re ( 962) 236 49.1 4.6e-05 NP_001311266 (OMIM: 602775,607721) leucine-rich re ( 582) 232 48.3 4.9e-05 XP_016872193 (OMIM: 602775,607721) PREDICTED: leuc ( 582) 232 48.3 4.9e-05 XP_016872191 (OMIM: 602775,607721) PREDICTED: leuc ( 582) 232 48.3 4.9e-05 XP_016872192 (OMIM: 602775,607721) PREDICTED: leuc ( 582) 232 48.3 4.9e-05 NP_031399 (OMIM: 602775,607721) leucine-rich repea ( 582) 232 48.3 4.9e-05 NP_001311265 (OMIM: 602775,607721) leucine-rich re ( 582) 232 48.3 4.9e-05 NP_056379 (OMIM: 610868) leucine-rich repeat trans ( 516) 229 47.8 6.2e-05 XP_006719333 (OMIM: 125255,610048) PREDICTED: deco ( 359) 224 46.9 8.1e-05 XP_005268750 (OMIM: 125255,610048) PREDICTED: deco ( 359) 224 46.9 8.1e-05 XP_016874406 (OMIM: 125255,610048) PREDICTED: deco ( 359) 224 46.9 8.1e-05 >>NP_001305407 (OMIM: 608015) tsukushin isoform b precur (353 aa) initn: 2343 init1: 2343 opt: 2343 Z-score: 2008.7 bits: 380.2 E(85289): 3.8e-105 Smith-Waterman score: 2343; 99.7% identity (100.0% similar) in 353 aa overlap (1-353:1-353) 10 20 30 40 50 60 pF1KE1 MPWPLLLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIMPVPIPLDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MPWPLLLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIMPVPIPLDT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 AHLDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AHLDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TALPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHNLIHRLVPHPTRAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TALPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHNLIHRLVPHPTRAG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LPAPTIQSLNLAWNRLHAVPNLRDLPLRYLSLDGNPLAVIGPGAFAGLGGLTHLSLASLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LPAPTIQSLNLAWNRLHAVPNLRDLPLRYLSLDGNPLAVIGPGAFAGLGGLTHLSLASLQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLL 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 HLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVDTRESAARGPTIL :::::::::::::::::::::::::::::::::::::::::::.::::::::: NP_001 HLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVDTRDSAARGPTIL 310 320 330 340 350 >>NP_001245139 (OMIM: 608015) tsukushin isoform b precur (353 aa) initn: 2343 init1: 2343 opt: 2343 Z-score: 2008.7 bits: 380.2 E(85289): 3.8e-105 Smith-Waterman score: 2343; 99.7% identity (100.0% similar) in 353 aa overlap (1-353:1-353) 10 20 30 40 50 60 pF1KE1 MPWPLLLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIMPVPIPLDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MPWPLLLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIMPVPIPLDT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 AHLDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AHLDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TALPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHNLIHRLVPHPTRAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TALPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHNLIHRLVPHPTRAG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LPAPTIQSLNLAWNRLHAVPNLRDLPLRYLSLDGNPLAVIGPGAFAGLGGLTHLSLASLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LPAPTIQSLNLAWNRLHAVPNLRDLPLRYLSLDGNPLAVIGPGAFAGLGGLTHLSLASLQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLL 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 HLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVDTRESAARGPTIL :::::::::::::::::::::::::::::::::::::::::::.::::::::: NP_001 HLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVDTRDSAARGPTIL 310 320 330 340 350 >>NP_056331 (OMIM: 608015) tsukushin isoform b precursor (353 aa) initn: 2343 init1: 2343 opt: 2343 Z-score: 2008.7 bits: 380.2 E(85289): 3.8e-105 Smith-Waterman score: 2343; 99.7% identity (100.0% similar) in 353 aa overlap (1-353:1-353) 10 20 30 40 50 60 pF1KE1 MPWPLLLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIMPVPIPLDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 MPWPLLLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIMPVPIPLDT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 AHLDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 AHLDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TALPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHNLIHRLVPHPTRAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 TALPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHNLIHRLVPHPTRAG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LPAPTIQSLNLAWNRLHAVPNLRDLPLRYLSLDGNPLAVIGPGAFAGLGGLTHLSLASLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 LPAPTIQSLNLAWNRLHAVPNLRDLPLRYLSLDGNPLAVIGPGAFAGLGGLTHLSLASLQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 RLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLL 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 HLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVDTRESAARGPTIL :::::::::::::::::::::::::::::::::::::::::::.::::::::: NP_056 HLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVDTRDSAARGPTIL 310 320 330 340 350 >>NP_001305408 (OMIM: 608015) tsukushin isoform b precur (353 aa) initn: 2343 init1: 2343 opt: 2343 Z-score: 2008.7 bits: 380.2 E(85289): 3.8e-105 Smith-Waterman score: 2343; 99.7% identity (100.0% similar) in 353 aa overlap (1-353:1-353) 10 20 30 40 50 60 pF1KE1 MPWPLLLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIMPVPIPLDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MPWPLLLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSGLGPHIMPVPIPLDT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 AHLDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AHLDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSRLRYLESLDLSHNGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 TALPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHNLIHRLVPHPTRAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TALPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHNLIHRLVPHPTRAG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LPAPTIQSLNLAWNRLHAVPNLRDLPLRYLSLDGNPLAVIGPGAFAGLGGLTHLSLASLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LPAPTIQSLNLAWNRLHAVPNLRDLPLRYLSLDGNPLAVIGPGAFAGLGGLTHLSLASLQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 RLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDLSGTNLVPLPEALLL 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 HLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVDTRESAARGPTIL :::::::::::::::::::::::::::::::::::::::::::.::::::::: NP_001 HLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVDTRDSAARGPTIL 310 320 330 340 350 >>NP_001305406 (OMIM: 608015) tsukushin isoform a precur (367 aa) initn: 2343 init1: 2343 opt: 2343 Z-score: 2008.5 bits: 380.2 E(85289): 3.9e-105 Smith-Waterman score: 2343; 99.7% identity (100.0% similar) in 353 aa overlap (1-353:15-367) 10 20 30 40 pF1KE1 MPWPLLLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSG :::::::::::::::::::::::::::::::::::::::::::::: NP_001 MIVRPSTATWNSPTMPWPLLLLLAVSGAQTTRPCFPGCQCEVETFGLFDSFSLTRVDCSG 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 LGPHIMPVPIPLDTAHLDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LGPHIMPVPIPLDTAHLDLSSNRLEMVNESVLAGPGYTTLAGLDLSHNLLTSISPTAFSR 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE1 LRYLESLDLSHNGLTALPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LRYLESLDLSHNGLTALPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSH 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE1 NLIHRLVPHPTRAGLPAPTIQSLNLAWNRLHAVPNLRDLPLRYLSLDGNPLAVIGPGAFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NLIHRLVPHPTRAGLPAPTIQSLNLAWNRLHAVPNLRDLPLRYLSLDGNPLAVIGPGAFA 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE1 GLGGLTHLSLASLQRLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GLGGLTHLSLASLQRLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQELDL 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE1 SGTNLVPLPEALLLHLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVDTRESA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: NP_001 SGTNLVPLPEALLLHLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVDTRDSA 310 320 330 340 350 360 350 pF1KE1 ARGPTIL ::::::: NP_001 ARGPTIL >>XP_005244884 (OMIM: 605492) PREDICTED: leucine-rich re (713 aa) initn: 342 init1: 175 opt: 337 Z-score: 299.4 bits: 64.9 E(85289): 6.1e-10 Smith-Waterman score: 377; 33.2% identity (59.3% similar) in 307 aa overlap (19-315:28-322) 10 20 30 40 pF1KE1 MPWPLLLLLAVSGAQTTRPCFPGCQCEVET-FGLFDSFS-LTRVDCSGLGP :: : : :... . .:. : :::. : XP_005 MRLLVAPLLLAWVAGATAAVPVVPWHVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 HIMPVPIPLDTAHLDLSSNRLEMVNESVLAGPGY-TTLAGLDLSHNLLTSISPTAFSRLR .: .: : : :.:: . :..: : :: ..:. ::::.: ... : : XP_005 TAVPPALPAGTQTLLLQSNSIVRVDQSEL---GYLANLTELDLSQNSFSDARDCDFHALP 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 YLESLDLSHNGLTALPAESFTS-SPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHN : :: : .: :: : .::.. . :... :.:::: ... ::. :. :: :. : XP_005 QLLSLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLH--LNSN 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 LIHRLVPHPTRAGLPAPTIQSLNLAWNRLHAV--PNLRDLP-LRYLSLDGNPLAVIGPGA :.. . .: :... : .. :.. :. :.: : :: : : : : :. : XP_005 LLRAI---DSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYA 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE1 FAGLGGLTHLSL--ASLQRLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQ . :: .: ::. .: :.:. : ....:::. :::. :: :. .: :... :. XP_005 LEGLQSLESLSFYDNQLARVPRRA---LEQVPGLKFLDLNKNP-LQRVGPGDFANMLHLK 240 250 260 270 280 290 300 310 320 330 340 pF1KE1 ELDLSGTN-LVPLPEALLLHLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVD :: :.. . :: . . :..:: : .... .. : XP_005 ELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALS 290 300 310 320 330 340 350 pF1KE1 TRESAARGPTIL XP_005 ALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRLPV 350 360 370 380 390 400 >>NP_006329 (OMIM: 605492) leucine-rich repeat neuronal (713 aa) initn: 342 init1: 175 opt: 337 Z-score: 299.4 bits: 64.9 E(85289): 6.1e-10 Smith-Waterman score: 377; 33.2% identity (59.3% similar) in 307 aa overlap (19-315:28-322) 10 20 30 40 pF1KE1 MPWPLLLLLAVSGAQTTRPCFPGCQCEVET-FGLFDSFS-LTRVDCSGLGP :: : : :... . .:. : :::. : NP_006 MRLLVAPLLLAWVAGATAAVPVVPWHVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 HIMPVPIPLDTAHLDLSSNRLEMVNESVLAGPGY-TTLAGLDLSHNLLTSISPTAFSRLR .: .: : : :.:: . :..: : :: ..:. ::::.: ... : : NP_006 TAVPPALPAGTQTLLLQSNSIVRVDQSEL---GYLANLTELDLSQNSFSDARDCDFHALP 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 YLESLDLSHNGLTALPAESFTS-SPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHN : :: : .: :: : .::.. . :... :.:::: ... ::. :. :: :. : NP_006 QLLSLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLH--LNSN 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 LIHRLVPHPTRAGLPAPTIQSLNLAWNRLHAV--PNLRDLP-LRYLSLDGNPLAVIGPGA :.. . .: :... : .. :.. :. :.: : :: : : : : :. : NP_006 LLRAI---DSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYA 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE1 FAGLGGLTHLSL--ASLQRLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQ . :: .: ::. .: :.:. : ....:::. :::. :: :. .: :... :. NP_006 LEGLQSLESLSFYDNQLARVPRRA---LEQVPGLKFLDLNKNP-LQRVGPGDFANMLHLK 240 250 260 270 280 290 300 310 320 330 340 pF1KE1 ELDLSGTN-LVPLPEALLLHLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVD :: :.. . :: . . :..:: : .... .. : NP_006 ELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALS 290 300 310 320 330 340 350 pF1KE1 TRESAARGPTIL NP_006 ALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRLPV 350 360 370 380 390 400 >>XP_016855539 (OMIM: 605492) PREDICTED: leucine-rich re (713 aa) initn: 342 init1: 175 opt: 337 Z-score: 299.4 bits: 64.9 E(85289): 6.1e-10 Smith-Waterman score: 377; 33.2% identity (59.3% similar) in 307 aa overlap (19-315:28-322) 10 20 30 40 pF1KE1 MPWPLLLLLAVSGAQTTRPCFPGCQCEVET-FGLFDSFS-LTRVDCSGLGP :: : : :... . .:. : :::. : XP_016 MRLLVAPLLLAWVAGATAAVPVVPWHVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 HIMPVPIPLDTAHLDLSSNRLEMVNESVLAGPGY-TTLAGLDLSHNLLTSISPTAFSRLR .: .: : : :.:: . :..: : :: ..:. ::::.: ... : : XP_016 TAVPPALPAGTQTLLLQSNSIVRVDQSEL---GYLANLTELDLSQNSFSDARDCDFHALP 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 YLESLDLSHNGLTALPAESFTS-SPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHN : :: : .: :: : .::.. . :... :.:::: ... ::. :. :: :. : XP_016 QLLSLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLH--LNSN 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 LIHRLVPHPTRAGLPAPTIQSLNLAWNRLHAV--PNLRDLP-LRYLSLDGNPLAVIGPGA :.. . .: :... : .. :.. :. :.: : :: : : : : :. : XP_016 LLRAI---DSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYA 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE1 FAGLGGLTHLSL--ASLQRLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQ . :: .: ::. .: :.:. : ....:::. :::. :: :. .: :... :. XP_016 LEGLQSLESLSFYDNQLARVPRRA---LEQVPGLKFLDLNKNP-LQRVGPGDFANMLHLK 240 250 260 270 280 290 300 310 320 330 340 pF1KE1 ELDLSGTN-LVPLPEALLLHLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVD :: :.. . :: . . :..:: : .... .. : XP_016 ELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALS 290 300 310 320 330 340 350 pF1KE1 TRESAARGPTIL XP_016 ALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRLPV 350 360 370 380 390 400 >>NP_963924 (OMIM: 605492) leucine-rich repeat neuronal (713 aa) initn: 342 init1: 175 opt: 337 Z-score: 299.4 bits: 64.9 E(85289): 6.1e-10 Smith-Waterman score: 377; 33.2% identity (59.3% similar) in 307 aa overlap (19-315:28-322) 10 20 30 40 pF1KE1 MPWPLLLLLAVSGAQTTRPCFPGCQCEVET-FGLFDSFS-LTRVDCSGLGP :: : : :... . .:. : :::. : NP_963 MRLLVAPLLLAWVAGATAAVPVVPWHVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 HIMPVPIPLDTAHLDLSSNRLEMVNESVLAGPGY-TTLAGLDLSHNLLTSISPTAFSRLR .: .: : : :.:: . :..: : :: ..:. ::::.: ... : : NP_963 TAVPPALPAGTQTLLLQSNSIVRVDQSEL---GYLANLTELDLSQNSFSDARDCDFHALP 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 YLESLDLSHNGLTALPAESFTS-SPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHN : :: : .: :: : .::.. . :... :.:::: ... ::. :. :: :. : NP_963 QLLSLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLH--LNSN 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 LIHRLVPHPTRAGLPAPTIQSLNLAWNRLHAV--PNLRDLP-LRYLSLDGNPLAVIGPGA :.. . .: :... : .. :.. :. :.: : :: : : : : :. : NP_963 LLRAI---DSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYA 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE1 FAGLGGLTHLSL--ASLQRLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQ . :: .: ::. .: :.:. : ....:::. :::. :: :. .: :... :. NP_963 LEGLQSLESLSFYDNQLARVPRRA---LEQVPGLKFLDLNKNP-LQRVGPGDFANMLHLK 240 250 260 270 280 290 300 310 320 330 340 pF1KE1 ELDLSGTN-LVPLPEALLLHLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVD :: :.. . :: . . :..:: : .... .. : NP_963 ELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALS 290 300 310 320 330 340 350 pF1KE1 TRESAARGPTIL NP_963 ALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRLPV 350 360 370 380 390 400 >>XP_011507368 (OMIM: 605492) PREDICTED: leucine-rich re (713 aa) initn: 342 init1: 175 opt: 337 Z-score: 299.4 bits: 64.9 E(85289): 6.1e-10 Smith-Waterman score: 377; 33.2% identity (59.3% similar) in 307 aa overlap (19-315:28-322) 10 20 30 40 pF1KE1 MPWPLLLLLAVSGAQTTRPCFPGCQCEVET-FGLFDSFS-LTRVDCSGLGP :: : : :... . .:. : :::. : XP_011 MRLLVAPLLLAWVAGATAAVPVVPWHVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFL 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 HIMPVPIPLDTAHLDLSSNRLEMVNESVLAGPGY-TTLAGLDLSHNLLTSISPTAFSRLR .: .: : : :.:: . :..: : :: ..:. ::::.: ... : : XP_011 TAVPPALPAGTQTLLLQSNSIVRVDQSEL---GYLANLTELDLSQNSFSDARDCDFHALP 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 YLESLDLSHNGLTALPAESFTS-SPLSDVNLSHNQLREVSVSAFTTHSQGRALHVDLSHN : :: : .: :: : .::.. . :... :.:::: ... ::. :. :: :. : XP_011 QLLSLHLEENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLH--LNSN 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 LIHRLVPHPTRAGLPAPTIQSLNLAWNRLHAV--PNLRDLP-LRYLSLDGNPLAVIGPGA :.. . .: :... : .. :.. :. :.: : :: : : : : :. : XP_011 LLRAI---DSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYA 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE1 FAGLGGLTHLSL--ASLQRLPELAPSGFRELPGLQVLDLSGNPKLNWAGAEVFSGLSSLQ . :: .: ::. .: :.:. : ....:::. :::. :: :. .: :... :. XP_011 LEGLQSLESLSFYDNQLARVPRRA---LEQVPGLKFLDLNKNP-LQRVGPGDFANMLHLK 240 250 260 270 280 290 300 310 320 330 340 pF1KE1 ELDLSGTN-LVPLPEALLLHLPALQSVSVGQDVRCRRLVREGTYPRRPGSSPKVALHCVD :: :.. . :: . . :..:: : .... .. : XP_011 ELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALS 290 300 310 320 330 340 350 pF1KE1 TRESAARGPTIL XP_011 ALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRLPV 350 360 370 380 390 400 353 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:04:26 2016 done: Sun Nov 6 15:04:28 2016 Total Scan time: 7.660 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]