FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5171, 161 aa 1>>>pF1KE5171 161 - 161 aa - 161 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3362+/-0.00058; mu= 7.5591+/- 0.035 mean_var=74.8160+/-14.848, 0's: 0 Z-trim(113.2): 2 B-trim: 0 in 0/52 Lambda= 0.148278 statistics sampled from 13899 (13900) to 13899 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.792), E-opt: 0.2 (0.427), width: 16 Scan time: 1.940 The best scores are: opt bits E(32554) CCDS8209.1 LAMTOR1 gene_id:55004|Hs108|chr11 ( 161) 1046 232.0 1.2e-61 >>CCDS8209.1 LAMTOR1 gene_id:55004|Hs108|chr11 (161 aa) initn: 1046 init1: 1046 opt: 1046 Z-score: 1220.0 bits: 232.0 E(32554): 1.2e-61 Smith-Waterman score: 1046; 100.0% identity (100.0% similar) in 161 aa overlap (1-161:1-161) 10 20 30 40 50 60 pF1KE5 MGCCYSSENEDSDQDREERKLLLDPSSPPTKALNGAEPNYHSLPSARTDEQALLSSILAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MGCCYSSENEDSDQDREERKLLLDPSSPPTKALNGAEPNYHSLPSARTDEQALLSSILAK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 TASNIIDVSAADSQGMEQHEYMDRARQYSTRLAVLSSSLTHWKKLPPLPSLTSQPHQVLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 TASNIIDVSAADSQGMEQHEYMDRARQYSTRLAVLSSSLTHWKKLPPLPSLTSQPHQVLA 70 80 90 100 110 120 130 140 150 160 pF1KE5 SEPIPFSDLQQVSRIAAYAYSALSQIRVDAKEELVVQFGIP ::::::::::::::::::::::::::::::::::::::::: CCDS82 SEPIPFSDLQQVSRIAAYAYSALSQIRVDAKEELVVQFGIP 130 140 150 160 161 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:15:53 2016 done: Mon Nov 7 22:15:53 2016 Total Scan time: 1.940 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]