Result of FASTA (omim) for
pFN21AE1681
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1681, 194 aa
1>>>pF1KE1681 194 - 194 aa - 194 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5111+/-0.000268; mu= 13.3319+/- 0.017
mean_var=78.7418+/-16.069, 0's: 0 Z-trim(121.4): 48 B-trim: 878 in 2/53
Lambda= 0.144535
statistics sampled from 37998 (38046) to 37998 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.791), E-opt: 0.2 (0.446), width: 16
Scan time: 5.140
The best scores are: opt bits E(85289)
NP_001138529 (OMIM: 604113) interleukin-18-binding ( 194) 1333 286.3 2.1e-77
XP_016872552 (OMIM: 604113) PREDICTED: interleukin ( 194) 1333 286.3 2.1e-77
XP_016872551 (OMIM: 604113) PREDICTED: interleukin ( 194) 1333 286.3 2.1e-77
XP_016872550 (OMIM: 604113) PREDICTED: interleukin ( 194) 1333 286.3 2.1e-77
XP_016872549 (OMIM: 604113) PREDICTED: interleukin ( 194) 1333 286.3 2.1e-77
XP_016872548 (OMIM: 604113) PREDICTED: interleukin ( 194) 1333 286.3 2.1e-77
NP_001034748 (OMIM: 604113) interleukin-18-binding ( 194) 1333 286.3 2.1e-77
NP_001034749 (OMIM: 604113) interleukin-18-binding ( 194) 1333 286.3 2.1e-77
NP_766630 (OMIM: 604113) interleukin-18-binding pr ( 194) 1333 286.3 2.1e-77
NP_005690 (OMIM: 604113) interleukin-18-binding pr ( 199) 1166 251.5 6.4e-67
NP_766632 (OMIM: 604113) interleukin-18-binding pr ( 163) 887 193.3 1.8e-49
NP_001138527 (OMIM: 604113) interleukin-18-binding ( 115) 542 121.2 6.1e-28
>>NP_001138529 (OMIM: 604113) interleukin-18-binding pro (194 aa)
initn: 1333 init1: 1333 opt: 1333 Z-score: 1510.8 bits: 286.3 E(85289): 2.1e-77
Smith-Waterman score: 1333; 100.0% identity (100.0% similar) in 194 aa overlap (1-194:1-194)
10 20 30 40 50 60
pF1KE1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
130 140 150 160 170 180
190
pF1KE1 EALPSSHSSPQQQG
::::::::::::::
NP_001 EALPSSHSSPQQQG
190
>>XP_016872552 (OMIM: 604113) PREDICTED: interleukin-18- (194 aa)
initn: 1333 init1: 1333 opt: 1333 Z-score: 1510.8 bits: 286.3 E(85289): 2.1e-77
Smith-Waterman score: 1333; 100.0% identity (100.0% similar) in 194 aa overlap (1-194:1-194)
10 20 30 40 50 60
pF1KE1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
130 140 150 160 170 180
190
pF1KE1 EALPSSHSSPQQQG
::::::::::::::
XP_016 EALPSSHSSPQQQG
190
>>XP_016872551 (OMIM: 604113) PREDICTED: interleukin-18- (194 aa)
initn: 1333 init1: 1333 opt: 1333 Z-score: 1510.8 bits: 286.3 E(85289): 2.1e-77
Smith-Waterman score: 1333; 100.0% identity (100.0% similar) in 194 aa overlap (1-194:1-194)
10 20 30 40 50 60
pF1KE1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
130 140 150 160 170 180
190
pF1KE1 EALPSSHSSPQQQG
::::::::::::::
XP_016 EALPSSHSSPQQQG
190
>>XP_016872550 (OMIM: 604113) PREDICTED: interleukin-18- (194 aa)
initn: 1333 init1: 1333 opt: 1333 Z-score: 1510.8 bits: 286.3 E(85289): 2.1e-77
Smith-Waterman score: 1333; 100.0% identity (100.0% similar) in 194 aa overlap (1-194:1-194)
10 20 30 40 50 60
pF1KE1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
130 140 150 160 170 180
190
pF1KE1 EALPSSHSSPQQQG
::::::::::::::
XP_016 EALPSSHSSPQQQG
190
>>XP_016872549 (OMIM: 604113) PREDICTED: interleukin-18- (194 aa)
initn: 1333 init1: 1333 opt: 1333 Z-score: 1510.8 bits: 286.3 E(85289): 2.1e-77
Smith-Waterman score: 1333; 100.0% identity (100.0% similar) in 194 aa overlap (1-194:1-194)
10 20 30 40 50 60
pF1KE1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
130 140 150 160 170 180
190
pF1KE1 EALPSSHSSPQQQG
::::::::::::::
XP_016 EALPSSHSSPQQQG
190
>>XP_016872548 (OMIM: 604113) PREDICTED: interleukin-18- (194 aa)
initn: 1333 init1: 1333 opt: 1333 Z-score: 1510.8 bits: 286.3 E(85289): 2.1e-77
Smith-Waterman score: 1333; 100.0% identity (100.0% similar) in 194 aa overlap (1-194:1-194)
10 20 30 40 50 60
pF1KE1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
130 140 150 160 170 180
190
pF1KE1 EALPSSHSSPQQQG
::::::::::::::
XP_016 EALPSSHSSPQQQG
190
>>NP_001034748 (OMIM: 604113) interleukin-18-binding pro (194 aa)
initn: 1333 init1: 1333 opt: 1333 Z-score: 1510.8 bits: 286.3 E(85289): 2.1e-77
Smith-Waterman score: 1333; 100.0% identity (100.0% similar) in 194 aa overlap (1-194:1-194)
10 20 30 40 50 60
pF1KE1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
130 140 150 160 170 180
190
pF1KE1 EALPSSHSSPQQQG
::::::::::::::
NP_001 EALPSSHSSPQQQG
190
>>NP_001034749 (OMIM: 604113) interleukin-18-binding pro (194 aa)
initn: 1333 init1: 1333 opt: 1333 Z-score: 1510.8 bits: 286.3 E(85289): 2.1e-77
Smith-Waterman score: 1333; 100.0% identity (100.0% similar) in 194 aa overlap (1-194:1-194)
10 20 30 40 50 60
pF1KE1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
130 140 150 160 170 180
190
pF1KE1 EALPSSHSSPQQQG
::::::::::::::
NP_001 EALPSSHSSPQQQG
190
>>NP_766630 (OMIM: 604113) interleukin-18-binding protei (194 aa)
initn: 1333 init1: 1333 opt: 1333 Z-score: 1510.8 bits: 286.3 E(85289): 2.1e-77
Smith-Waterman score: 1333; 100.0% identity (100.0% similar) in 194 aa overlap (1-194:1-194)
10 20 30 40 50 60
pF1KE1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_766 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_766 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_766 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
130 140 150 160 170 180
190
pF1KE1 EALPSSHSSPQQQG
::::::::::::::
NP_766 EALPSSHSSPQQQG
190
>>NP_005690 (OMIM: 604113) interleukin-18-binding protei (199 aa)
initn: 1166 init1: 1166 opt: 1166 Z-score: 1322.4 bits: 251.5 E(85289): 6.4e-67
Smith-Waterman score: 1166; 100.0% identity (100.0% similar) in 169 aa overlap (1-169:1-169)
10 20 30 40 50 60
pF1KE1 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MTMRHNWTPDLSPLWVLLLCAHVVTLLVRATPVSQTTTAATASVRSTKDPCPSQPPVFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 AKQCPALEVTWPEVEVPLNGTLSLSCVACSRFPNFSILYWLGNGSFIEHLPGRLWEGSTS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWAGLRATLPPTQ
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RERGSTGTQLCKALVLEQLTPALHSTNFSCVLVDPEQVVQRHVVLAQLWVRSPRRGLQEQ
130 140 150 160 170 180
190
pF1KE1 EALPSSHSSPQQQG
NP_005 EELCFHMWGGKGGLCQSSL
190
194 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 15:06:23 2016 done: Sun Nov 6 15:06:24 2016
Total Scan time: 5.140 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]