FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9406, 470 aa 1>>>pF1KE9406 470 - 470 aa - 470 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.6176+/-0.00109; mu= -13.6319+/- 0.066 mean_var=500.0904+/-108.336, 0's: 0 Z-trim(115.5): 104 B-trim: 1614 in 2/51 Lambda= 0.057352 statistics sampled from 15939 (16039) to 15939 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.779), E-opt: 0.2 (0.493), width: 16 Scan time: 3.810 The best scores are: opt bits E(32554) CCDS8165.1 GPR152 gene_id:390212|Hs108|chr11 ( 470) 3245 282.8 5.3e-76 >>CCDS8165.1 GPR152 gene_id:390212|Hs108|chr11 (470 aa) initn: 3245 init1: 3245 opt: 3245 Z-score: 1478.0 bits: 282.8 E(32554): 5.3e-76 Smith-Waterman score: 3245; 100.0% identity (100.0% similar) in 470 aa overlap (1-470:1-470) 10 20 30 40 50 60 pF1KE9 MDTTMEADLGATGHRPRTELDDEDSYPQGGWDTVFLVALLLLGLPANGLMAWLAGSQARH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MDTTMEADLGATGHRPRTELDDEDSYPQGGWDTVFLVALLLLGLPANGLMAWLAGSQARH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 GAGTRLALLLLSLALSDFLFLAAAAFQILEIRHGGHWPLGTAACRFYYFLWGVSYSSGLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 GAGTRLALLLLSLALSDFLFLAAAAFQILEIRHGGHWPLGTAACRFYYFLWGVSYSSGLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 LLAALSLDRCLLALCPHWYPGHRPVRLPLWVCAGVWVLATLFSVPWLVFPEAAVWWYDLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 LLAALSLDRCLLALCPHWYPGHRPVRLPLWVCAGVWVLATLFSVPWLVFPEAAVWWYDLV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 ICLDFWDSEELSLRMLEVLGGFLPFLLLLVCHVLTQATACRTCHRQQQPAACRGFARVAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 ICLDFWDSEELSLRMLEVLGGFLPFLLLLVCHVLTQATACRTCHRQQQPAACRGFARVAR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 TILSAYVVLRLPYQLAQLLYLAFLWDVYSGYLLWEALVYSDYLILLNSCLSPFLCLMASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 TILSAYVVLRLPYQLAQLLYLAFLWDVYSGYLLWEALVYSDYLILLNSCLSPFLCLMASA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 DLRTLLRSVLSSFAAALCEERPGSFTPTEPQTQLDSEGPTLPEPMAEAQSQMDPVAQPQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 DLRTLLRSVLSSFAAALCEERPGSFTPTEPQTQLDSEGPTLPEPMAEAQSQMDPVAQPQV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 NPTLQPRSDPTAQPQLNPTAQPQSDPTAQPQLNLMAQPQSDSVAQPQADTNVQTPAPAAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 NPTLQPRSDPTAQPQLNPTAQPQSDPTAQPQLNLMAQPQSDSVAQPQADTNVQTPAPAAS 370 380 390 400 410 420 430 440 450 460 470 pF1KE9 SVPSPCDEASPTPSSHPTPGALEDPATPPASEGESPSSTPPEAAPGAGPT :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 SVPSPCDEASPTPSSHPTPGALEDPATPPASEGESPSSTPPEAAPGAGPT 430 440 450 460 470 470 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:08:16 2016 done: Sun Nov 6 15:08:17 2016 Total Scan time: 3.810 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]