FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5290, 252 aa 1>>>pF1KE5290 252 - 252 aa - 252 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3653+/-0.0003; mu= 14.5882+/- 0.019 mean_var=76.5771+/-15.657, 0's: 0 Z-trim(117.5): 73 B-trim: 0 in 0/55 Lambda= 0.146563 statistics sampled from 29469 (29544) to 29469 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.711), E-opt: 0.2 (0.346), width: 16 Scan time: 7.090 The best scores are: opt bits E(85289) NP_203134 (OMIM: 603940) potassium channel subfami ( 252) 1675 363.1 2.6e-100 NP_258416 (OMIM: 603940) potassium channel subfami ( 252) 1675 363.1 2.6e-100 NP_005705 (OMIM: 603940) potassium channel subfami ( 257) 1597 346.6 2.5e-95 NP_203133 (OMIM: 603940) potassium channel subfami ( 307) 1590 345.2 7.9e-95 NP_002236 (OMIM: 601745) potassium channel subfami ( 336) 583 132.3 1.1e-30 NP_004814 (OMIM: 603939) potassium channel subfami ( 313) 441 102.3 1.1e-21 XP_011507825 (OMIM: 603219) PREDICTED: potassium c ( 370) 389 91.3 2.6e-18 XP_011507824 (OMIM: 603219) PREDICTED: potassium c ( 370) 389 91.3 2.6e-18 XP_011507826 (OMIM: 603219) PREDICTED: potassium c ( 370) 389 91.3 2.6e-18 NP_055032 (OMIM: 603219) potassium channel subfami ( 411) 389 91.4 2.8e-18 XP_016856738 (OMIM: 603219) PREDICTED: potassium c ( 412) 389 91.4 2.8e-18 NP_001017424 (OMIM: 603219) potassium channel subf ( 422) 389 91.4 2.8e-18 XP_016856737 (OMIM: 603219) PREDICTED: potassium c ( 422) 389 91.4 2.8e-18 NP_001017425 (OMIM: 603219) potassium channel subf ( 426) 389 91.4 2.9e-18 NP_066984 (OMIM: 605873) potassium channel subfami ( 538) 388 91.2 4e-18 NP_612191 (OMIM: 605873) potassium channel subfami ( 543) 388 91.2 4e-18 NP_612190 (OMIM: 605873) potassium channel subfami ( 543) 388 91.2 4e-18 NP_001128578 (OMIM: 607369) potassium channel subf ( 294) 375 88.3 1.7e-17 NP_115491 (OMIM: 607369) potassium channel subfami ( 309) 375 88.3 1.7e-17 NP_001128577 (OMIM: 607369) potassium channel subf ( 322) 364 86.0 8.9e-17 XP_016866835 (OMIM: 607369) PREDICTED: potassium c ( 262) 362 85.5 1e-16 NP_001128579 (OMIM: 607369) potassium channel subf ( 262) 362 85.5 1e-16 XP_011542486 (OMIM: 601745) PREDICTED: potassium c ( 268) 340 80.9 2.6e-15 NP_113648 (OMIM: 607370) potassium channel subfami ( 332) 318 76.3 7.8e-14 NP_001128583 (OMIM: 607370) potassium channel subf ( 271) 306 73.7 3.8e-13 NP_001304019 (OMIM: 605720) potassium channel subf ( 393) 305 73.6 6e-13 NP_201567 (OMIM: 605720) potassium channel subfami ( 393) 305 73.6 6e-13 XP_011513237 (OMIM: 607369) PREDICTED: potassium c ( 197) 294 71.0 1.7e-12 XP_011535142 (OMIM: 605873) PREDICTED: potassium c ( 410) 294 71.3 3.1e-12 XP_005249513 (OMIM: 603493) PREDICTED: potassium c ( 496) 294 71.3 3.6e-12 NP_003731 (OMIM: 603493) potassium channel subfami ( 499) 292 70.9 4.8e-12 NP_071753 (OMIM: 607368) potassium channel subfami ( 330) 252 62.3 1.2e-09 NP_002237 (OMIM: 603220,615344) potassium channel ( 394) 240 59.8 8.2e-09 XP_011515404 (OMIM: 605874,612292) PREDICTED: pota ( 374) 219 55.4 1.7e-07 NP_001269463 (OMIM: 605874,612292) potassium chann ( 374) 219 55.4 1.7e-07 XP_011515403 (OMIM: 605874,612292) PREDICTED: pota ( 401) 219 55.4 1.8e-07 XP_011525828 (OMIM: 603939) PREDICTED: potassium c ( 179) 203 51.8 1e-06 NP_071338 (OMIM: 607366) potassium channel subfami ( 430) 205 52.5 1.5e-06 XP_011525829 (OMIM: 603939) PREDICTED: potassium c ( 176) 167 44.2 0.00019 XP_016882995 (OMIM: 603939) PREDICTED: potassium c ( 185) 167 44.2 0.0002 NP_862823 (OMIM: 613655,613656) potassium channel ( 384) 162 43.3 0.00074 NP_071337 (OMIM: 607367) potassium channel subfami ( 408) 154 41.7 0.0025 XP_016857053 (OMIM: 176200,600923) PREDICTED: prot ( 362) 146 39.9 0.0074 XP_011507983 (OMIM: 176200,600923) PREDICTED: prot ( 362) 146 39.9 0.0074 XP_016857052 (OMIM: 176200,600923) PREDICTED: prot ( 362) 146 39.9 0.0074 XP_006711469 (OMIM: 176200,600923) PREDICTED: prot ( 388) 146 40.0 0.0078 XP_005245352 (OMIM: 176200,600923) PREDICTED: prot ( 388) 146 40.0 0.0078 XP_011507981 (OMIM: 176200,600923) PREDICTED: prot ( 388) 146 40.0 0.0078 XP_011507980 (OMIM: 176200,600923) PREDICTED: prot ( 388) 146 40.0 0.0078 XP_016857051 (OMIM: 176200,600923) PREDICTED: prot ( 388) 146 40.0 0.0078 >>NP_203134 (OMIM: 603940) potassium channel subfamily K (252 aa) initn: 1675 init1: 1675 opt: 1675 Z-score: 1921.8 bits: 363.1 E(85289): 2.6e-100 Smith-Waterman score: 1675; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252) 10 20 30 40 50 60 pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_203 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_203 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_203 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_203 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG 190 200 210 220 230 240 250 pF1KE5 GGTSLQGTAWEG :::::::::::: NP_203 GGTSLQGTAWEG 250 >>NP_258416 (OMIM: 603940) potassium channel subfamily K (252 aa) initn: 1675 init1: 1675 opt: 1675 Z-score: 1921.8 bits: 363.1 E(85289): 2.6e-100 Smith-Waterman score: 1675; 100.0% identity (100.0% similar) in 252 aa overlap (1-252:1-252) 10 20 30 40 50 60 pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_258 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_258 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_258 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_258 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG 190 200 210 220 230 240 250 pF1KE5 GGTSLQGTAWEG :::::::::::: NP_258 GGTSLQGTAWEG 250 >>NP_005705 (OMIM: 603940) potassium channel subfamily K (257 aa) initn: 1646 init1: 1594 opt: 1597 Z-score: 1832.5 bits: 346.6 E(85289): 2.5e-95 Smith-Waterman score: 1597; 96.0% identity (98.0% similar) in 252 aa overlap (1-252:1-252) 10 20 30 40 50 60 pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG 190 200 210 220 230 240 250 pF1KE5 GGTSLQGTAWEG .. : . . .: NP_005 KSSHLTACGGRGKRSLD 250 >>NP_203133 (OMIM: 603940) potassium channel subfamily K (307 aa) initn: 1590 init1: 1590 opt: 1590 Z-score: 1823.5 bits: 345.2 E(85289): 7.9e-95 Smith-Waterman score: 1590; 100.0% identity (100.0% similar) in 240 aa overlap (1-240:1-240) 10 20 30 40 50 60 pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_203 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_203 GALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTTGYGHMAPLSPGGKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_203 FCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQAVALGLLVAS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_203 SFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQLALLG 190 200 210 220 230 240 250 pF1KE5 GGTSLQGTAWEG NP_203 YLLLGLLAMLLAVETFSELPQVRAMGKFFRPSGPVTAEDQGGILGQDELALSTLPPAAPA 250 260 270 280 290 300 >>NP_002236 (OMIM: 601745) potassium channel subfamily K (336 aa) initn: 498 init1: 292 opt: 583 Z-score: 672.2 bits: 132.3 E(85289): 1.1e-30 Smith-Waterman score: 583; 44.0% identity (72.9% similar) in 218 aa overlap (7-223:21-236) 10 20 30 40 pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAE : .:.::...:: : .:::::...: : :. ::: NP_002 MLQSLAGSSCVRLVERHRSAWC-FGFLVLGYLLYLVFGAVVFSSVELPYEDLLRQELRKL 10 20 30 40 50 50 60 70 80 90 100 pF1KE5 LAAFQAEHRACLPPGALEELLGTALATQAHGVSTLGNSSEGRTWDLPSALLFAASILTTT : ::. :: ::..:: .: .. .:::.:.:.: . .::. :::.::...:.:: NP_002 KRRFLEEHE-CLSEQQLEQFLGRVLEASNYGVSVLSNASGNWNWDFTSALFFASTVLSTT 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE5 GYGHMAPLSPGGKAFCMVYAALGLPASLA-LVATLRHCLLPVLSRPRAWVAVHWQLSPAR :::: .::: ::::::..:...:.: .: :.:.... . : :: . ..: .: NP_002 GYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHVTRRPVLYFHIRWGFSKQV 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE5 AALLQAVALGLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRS .:...:: ::....: : ..:: :. :. : ..: . :::: ::::::: : .::.: NP_002 VAIVHAVLLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPGEGYN 180 190 200 210 220 230 230 240 250 pF1KE5 LHPVIYHLGQLALLGGGTSLQGTAWEG NP_002 QKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKFRKMFYVKKDKDEDQVHIIEHDQ 240 250 260 270 280 290 >>NP_004814 (OMIM: 603939) potassium channel subfamily K (313 aa) initn: 457 init1: 195 opt: 441 Z-score: 510.3 bits: 102.3 E(85289): 1.1e-21 Smith-Waterman score: 447; 38.2% identity (65.3% similar) in 251 aa overlap (9-239:2-250) 10 20 30 40 50 pF1KE5 MGGLRPWSRYGLLVVAHLLA----LGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRA : : :... : : : :::.. :::: ::.:::.. : : .. NP_004 MRRGALLAGALAAYAAYLVLGALLVARLEGPHEARLRAELET-LRAQLLQRSP 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 CLPPGALEELLGTALATQAHGVSTLGNSSEGRT-----WDLPSALLFAASILTTTGYGHM :. ::. .. .::. : .:.:.: . . ::. :::.::....::.:::. NP_004 CVAAPALDAFVERVLAAGRLGRVVLANASGSANASDPAWDFASALFFASTLITTVGYGYT 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 APLSPGGKAFCMVYAALGLPAS-LALVATLRHCLLPVLSRPRAWVAVHWQLSPARAALLQ .::. .:::: ...: ::.:.. : :.:. .. : . : .:....: .: ::: . NP_004 TPLTDAGKAFSIAFALLGVPTTMLLLTASAQRLSLLLTHVPLSWLSMRWGWDPRRAACWH 120 130 140 150 160 170 180 190 200 210 220 pF1KE5 AVAL-GLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRG-----R ::: :..:. : :.::... :. :.: : :::: ::::::: : .::.. : NP_004 LVALLGVVVTVCF-LVPAVIFAHLEEAWSFLDAFYFCFISLSTIGLGDYVPGEAPGQPYR 180 190 200 210 220 230 230 240 250 pF1KE5 SLHPV---IY-HLGQLALLGGGTSLQGTAWEG .:. : .: :: .:.. NP_004 ALYKVLVTVYLFLGLVAMVLVLQTFRHVSDLHGLTELILLPPPCPASFNADEDDRVDILG 240 250 260 270 280 290 >>XP_011507825 (OMIM: 603219) PREDICTED: potassium chann (370 aa) initn: 288 init1: 227 opt: 389 Z-score: 449.9 bits: 91.3 E(85289): 2.6e-18 Smith-Waterman score: 389; 31.5% identity (63.5% similar) in 219 aa overlap (7-221:3-219) 10 20 30 40 50 60 pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP :. . . .. .: : .::.::.::: : .. . . .: ..: .:. XP_011 MKWKTVSTIFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQH-SCVNS 10 20 30 40 50 70 80 90 100 110 pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRT-WDLPSALLFAASILTTTGYGHMAPLSPGGK :.::. .:. :. :::.:. . ::: :...::....:: :.:...: . ::: XP_011 TELDELIQQIVAAINAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 AFCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVA---VHWQLSPARAALLQAVALGL ::..:: ::.: :.: . : .... : : ..:..: .. ..... . : XP_011 IFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFIL 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE5 LVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQL . :: :::... ..: : : :.:: .:.:::. : . : XP_011 FGCVLFVALPAIIFKHIEGW-SALDAIYFVVITLTTIGFGDYVAGGSDIEYLDFYKPVVW 180 190 200 210 220 230 240 250 pF1KE5 ALLGGGTSLQGTAWEG XP_011 FWILVGLAYFAAVLSMIGDWLRVISKKTKEEVGEFRAHAAEWTANVTAEFKETRRRLSVE 240 250 260 270 280 290 >>XP_011507824 (OMIM: 603219) PREDICTED: potassium chann (370 aa) initn: 288 init1: 227 opt: 389 Z-score: 449.9 bits: 91.3 E(85289): 2.6e-18 Smith-Waterman score: 389; 31.5% identity (63.5% similar) in 219 aa overlap (7-221:3-219) 10 20 30 40 50 60 pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP :. . . .. .: : .::.::.::: : .. . . .: ..: .:. XP_011 MKWKTVSTIFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQH-SCVNS 10 20 30 40 50 70 80 90 100 110 pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRT-WDLPSALLFAASILTTTGYGHMAPLSPGGK :.::. .:. :. :::.:. . ::: :...::....:: :.:...: . ::: XP_011 TELDELIQQIVAAINAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 AFCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVA---VHWQLSPARAALLQAVALGL ::..:: ::.: :.: . : .... : : ..:..: .. ..... . : XP_011 IFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFIL 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE5 LVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQL . :: :::... ..: : : :.:: .:.:::. : . : XP_011 FGCVLFVALPAIIFKHIEGW-SALDAIYFVVITLTTIGFGDYVAGGSDIEYLDFYKPVVW 180 190 200 210 220 230 240 250 pF1KE5 ALLGGGTSLQGTAWEG XP_011 FWILVGLAYFAAVLSMIGDWLRVISKKTKEEVGEFRAHAAEWTANVTAEFKETRRRLSVE 240 250 260 270 280 290 >>XP_011507826 (OMIM: 603219) PREDICTED: potassium chann (370 aa) initn: 288 init1: 227 opt: 389 Z-score: 449.9 bits: 91.3 E(85289): 2.6e-18 Smith-Waterman score: 389; 31.5% identity (63.5% similar) in 219 aa overlap (7-221:3-219) 10 20 30 40 50 60 pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPACRLQAELRAELAAFQAEHRACLPP :. . . .. .: : .::.::.::: : .. . . .: ..: .:. XP_011 MKWKTVSTIFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQH-SCVNS 10 20 30 40 50 70 80 90 100 110 pF1KE5 GALEELLGTALATQAHGVSTLGNSSEGRT-WDLPSALLFAASILTTTGYGHMAPLSPGGK :.::. .:. :. :::.:. . ::: :...::....:: :.:...: . ::: XP_011 TELDELIQQIVAAINAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPRTEGGK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 AFCMVYAALGLPASLALVATLRHCLLPVLSRPRAWVA---VHWQLSPARAALLQAVALGL ::..:: ::.: :.: . : .... : : ..:..: .. ..... . : XP_011 IFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVSQTKIRIISTIIFIL 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE5 LVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLSTIGLEDLLPGRGRSLHPVIYHLGQL . :: :::... ..: : : :.:: .:.:::. : . : XP_011 FGCVLFVALPAIIFKHIEGW-SALDAIYFVVITLTTIGFGDYVAGGSDIEYLDFYKPVVW 180 190 200 210 220 230 240 250 pF1KE5 ALLGGGTSLQGTAWEG XP_011 FWILVGLAYFAAVLSMIGDWLRVISKKTKEEVGEFRAHAAEWTANVTAEFKETRRRLSVE 240 250 260 270 280 290 >>NP_055032 (OMIM: 603219) potassium channel subfamily K (411 aa) initn: 288 init1: 227 opt: 389 Z-score: 449.2 bits: 91.4 E(85289): 2.8e-18 Smith-Waterman score: 389; 31.5% identity (63.5% similar) in 219 aa overlap (7-221:44-260) 10 20 30 pF1KE5 MGGLRPWSRYGLLVVAHLLALGLGAVVFQALEGPPA :. . . .. .: : .::.::.::: : NP_055 QNSKPRLSFSTKPTVLASRVESDTTINVMKWKTVSTIFLVVVLYLIIGATVFKALEQPHE 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE5 CRLQAELRAELAAFQAEHRACLPPGALEELLGTALATQAHGVSTLGNSSEGRT-WDLPSA .. . . .: ..: .:. :.::. .:. :. :::.:. . ::: :. NP_055 ISQRTTIVIQKQTFISQH-SCVNSTELDELIQQIVAAINAGIIPLGNTSNQISHWDLGSS 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE5 LLFAASILTTTGYGHMAPLSPGGKAFCMVYAALGLPASLALVATLRHCLLPVLSRPRAWV ..::....:: :.:...: . ::: ::..:: ::.: :.: . : .... : : NP_055 FFFAGTVITTIGFGNISPRTEGGKIFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKV 140 150 160 170 180 190 160 170 180 190 200 210 pF1KE5 A---VHWQLSPARAALLQAVALGLLVASSFVLLPALVLWGLQGDCSLLGAVYFCFSSLST ..:..: .. ..... . :. :: :::... ..: : : :.:: .:.: NP_055 EDTFIKWNVSQTKIRIISTIIFILFGCVLFVALPAIIFKHIEGW-SALDAIYFVVITLTT 200 210 220 230 240 250 220 230 240 250 pF1KE5 IGLEDLLPGRGRSLHPVIYHLGQLALLGGGTSLQGTAWEG ::. : . : NP_055 IGFGDYVAGGSDIEYLDFYKPVVWFWILVGLAYFAAVLSMIGDWLRVISKKTKEEVGEFR 260 270 280 290 300 310 252 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 23:27:06 2016 done: Mon Nov 7 23:27:07 2016 Total Scan time: 7.090 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]