FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6616, 335 aa 1>>>pF1KE6616 335 - 335 aa - 335 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0542+/-0.00061; mu= 9.2350+/- 0.037 mean_var=109.9348+/-21.989, 0's: 0 Z-trim(115.6): 11 B-trim: 0 in 0/53 Lambda= 0.122323 statistics sampled from 16171 (16178) to 16171 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.803), E-opt: 0.2 (0.497), width: 16 Scan time: 2.430 The best scores are: opt bits E(32554) CCDS8025.1 B3GAT3 gene_id:26229|Hs108|chr11 ( 335) 2288 413.5 1.2e-115 CCDS76417.1 B3GAT3 gene_id:26229|Hs108|chr11 ( 319) 2081 377.0 1.1e-104 CCDS76418.1 B3GAT3 gene_id:26229|Hs108|chr11 ( 315) 2071 375.2 3.8e-104 CCDS8500.1 B3GAT1 gene_id:27087|Hs108|chr11 ( 334) 870 163.3 2.6e-40 CCDS4974.1 B3GAT2 gene_id:135152|Hs108|chr6 ( 323) 578 111.7 8.1e-25 >>CCDS8025.1 B3GAT3 gene_id:26229|Hs108|chr11 (335 aa) initn: 2288 init1: 2288 opt: 2288 Z-score: 2189.7 bits: 413.5 E(32554): 1.2e-115 Smith-Waterman score: 2288; 100.0% identity (100.0% similar) in 335 aa overlap (1-335:1-335) 10 20 30 40 50 60 pF1KE6 MKLKLKNVFLAYFLVSIAGLLYALVQLGQPCDCLPPLRAAAEQLRQKDLRISQLQAELRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 MKLKLKNVFLAYFLVSIAGLLYALVQLGQPCDCLPPLRAAAEQLRQKDLRISQLQAELRR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PPPAPAQPPEPEALPTIYVVTPTYARLVQKAELVRLSQTLSLVPRLHWLLVEDAEGPTPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 PPPAPAQPPEPEALPTIYVVTPTYARLVQKAELVRLSQTLSLVPRLHWLLVEDAEGPTPL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VSGLLAASGLLFTHLVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 VSGLLAASGLLFTHLVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLRFEGPQVQDGRVVGFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 PPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLRFEGPQVQDGRVVGFH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 TAWEPSRPFPVDMAGFAVALPLLLDKPNAQFDSTAPRGHLESSLLSHLVDPKDLEPRAAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS80 TAWEPSRPFPVDMAGFAVALPLLLDKPNAQFDSTAPRGHLESSLLSHLVDPKDLEPRAAN 250 260 270 280 290 300 310 320 330 pF1KE6 CTRVLVWHTRTEKPKMKQEEQLQRQGRGSDPAIEV ::::::::::::::::::::::::::::::::::: CCDS80 CTRVLVWHTRTEKPKMKQEEQLQRQGRGSDPAIEV 310 320 330 >>CCDS76417.1 B3GAT3 gene_id:26229|Hs108|chr11 (319 aa) initn: 2120 init1: 2074 opt: 2081 Z-score: 1992.6 bits: 377.0 E(32554): 1.1e-104 Smith-Waterman score: 2081; 98.1% identity (98.4% similar) in 312 aa overlap (1-312:1-312) 10 20 30 40 50 60 pF1KE6 MKLKLKNVFLAYFLVSIAGLLYALVQLGQPCDCLPPLRAAAEQLRQKDLRISQLQAELRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MKLKLKNVFLAYFLVSIAGLLYALVQLGQPCDCLPPLRAAAEQLRQKDLRISQLQAELRR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PPPAPAQPPEPEALPTIYVVTPTYARLVQKAELVRLSQTLSLVPRLHWLLVEDAEGPTPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 PPPAPAQPPEPEALPTIYVVTPTYARLVQKAELVRLSQTLSLVPRLHWLLVEDAEGPTPL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VSGLLAASGLLFTHLVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VSGLLAASGLLFTHLVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLRFEGPQVQDGRVVGFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 PPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLRFEGPQVQDGRVVGFH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 TAWEPSRPFPVDMAGFAVALPLLLDKPNAQFDSTAPRGHLESSLLSHLVDPKDLEPRAAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 TAWEPSRPFPVDMAGFAVALPLLLDKPNAQFDSTAPRGHLESSLLSHLVDPKDLEPRAAN 250 260 270 280 290 300 310 320 330 pF1KE6 CTRVLVWHTRTEKPKMKQEEQLQRQGRGSDPAIEV ::: :. : : CCDS76 CTRSLAVSPRLECSSAILA 310 >>CCDS76418.1 B3GAT3 gene_id:26229|Hs108|chr11 (315 aa) initn: 2071 init1: 2071 opt: 2071 Z-score: 1983.1 bits: 375.2 E(32554): 3.8e-104 Smith-Waterman score: 2071; 100.0% identity (100.0% similar) in 303 aa overlap (1-303:1-303) 10 20 30 40 50 60 pF1KE6 MKLKLKNVFLAYFLVSIAGLLYALVQLGQPCDCLPPLRAAAEQLRQKDLRISQLQAELRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MKLKLKNVFLAYFLVSIAGLLYALVQLGQPCDCLPPLRAAAEQLRQKDLRISQLQAELRR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PPPAPAQPPEPEALPTIYVVTPTYARLVQKAELVRLSQTLSLVPRLHWLLVEDAEGPTPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 PPPAPAQPPEPEALPTIYVVTPTYARLVQKAELVRLSQTLSLVPRLHWLLVEDAEGPTPL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VSGLLAASGLLFTHLVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VSGLLAASGLLFTHLVVLTPKAQRLREGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLRFEGPQVQDGRVVGFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 PPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLRFEGPQVQDGRVVGFH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 TAWEPSRPFPVDMAGFAVALPLLLDKPNAQFDSTAPRGHLESSLLSHLVDPKDLEPRAAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 TAWEPSRPFPVDMAGFAVALPLLLDKPNAQFDSTAPRGHLESSLLSHLVDPKDLEPRAAN 250 260 270 280 290 300 310 320 330 pF1KE6 CTRVLVWHTRTEKPKMKQEEQLQRQGRGSDPAIEV ::: CCDS76 CTRTESRCVTQAGVQ 310 >>CCDS8500.1 B3GAT1 gene_id:27087|Hs108|chr11 (334 aa) initn: 863 init1: 347 opt: 870 Z-score: 837.3 bits: 163.3 E(32554): 2.6e-40 Smith-Waterman score: 885; 55.2% identity (73.7% similar) in 270 aa overlap (68-335:77-334) 40 50 60 70 80 90 pF1KE6 RAAAEQLRQKDLRISQLQAELRRPPPAPAQPPEPEALPTIYVVTPTYARLVQKAELVRLS :: ..::::.::::::.: ::::::.:.. CCDS85 TPPGADPREYCTSDRDIVEVVRTEYVYTRPPPWSDTLPTIHVVTPTYSRPVQKAELTRMA 50 60 70 80 90 100 100 110 120 130 140 150 pF1KE6 QTLSLVPRLHWLLVEDAEGPTPLVSGLLAASGLLFTHLVVLTPKAQRLREGEPGWVHPRG .:: :: ::::.:::: :::.. :: .:: .::: : ::. .:: ::: CCDS85 NTLLHVPNLHWLVVEDAPRRTPLTARLLRDTGLNYTHLHVETPRNYKLRGDARDPRIPRG 110 120 130 140 150 160 160 170 180 190 200 210 pF1KE6 VEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWP . ::: :: ::: : : . ::::::::::::: ::::::: :: ::::: CCDS85 TMQRNLALRWLR--------ETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWP 170 180 190 200 210 220 230 240 250 260 270 pF1KE6 VGLVGGLRFEGPQVQD-GRVVGFHTAWEPSRPFPVDMAGFAVALPLLLDKPNAQFDSTAP :..:::::.:.:.:. :.:::..:...: ::: .::::::: : :.:.. .: : . CCDS85 VAFVGGLRYEAPRVNGAGKVVGWKTVFDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGV 220 230 240 250 260 270 280 290 300 310 320 330 pF1KE6 RG-HLESSLLSHLVDPKDLEPRAANCTRVLVWHTRTEKPKMKQEEQLQRQGRGSDPAIEV .: . ::::: .:: .::::.:::::..:::::::::: . .: ..: .::..:. CCDS85 KGGYQESSLLRELVTLNDLEPKAANCTKILVWHTRTEKPVLVNE---GKKGF-TDPSVEI 280 290 300 310 320 330 >>CCDS4974.1 B3GAT2 gene_id:135152|Hs108|chr6 (323 aa) initn: 835 init1: 392 opt: 578 Z-score: 559.0 bits: 111.7 E(32554): 8.1e-25 Smith-Waterman score: 837; 52.3% identity (73.9% similar) in 264 aa overlap (59-321:65-313) 30 40 50 60 70 80 pF1KE6 QPCDCLPPLRAAAEQLRQKDLRISQLQAELRRPPPAPAQPPEPEALPTIYVVTPTYARLV .: : :::. :::::..::::.: : CCDS49 TPRPYFSPYAVGRGGARLPLRRGGPAHGTQKRNQSRPQPQPEPQ-LPTIYAITPTYSRPV 40 50 60 70 80 90 90 100 110 120 130 140 pF1KE6 QKAELVRLSQTLSLVPRLHWLLVEDAEGPTPLVSGLLAASGLLFTHLVVLTPKAQRLREG :::::.::..:. : .:::.::::: . . ::: .:: .:: ::: : ::. : CCDS49 QKAELTRLANTFRQVAQLHWILVEDAAARSELVSRFLARAGLPSTHLHVPTPR----RYK 100 110 120 130 140 150 160 170 180 190 200 pF1KE6 EPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMR .:: ::..:::: .: ::: : .. : ::..::::::::: :::.::: CCDS49 RPGL--PRATEQRNAGLAWLRQRHQ---HQRAQP-----GVLFFADDDNTYSLELFQEMR 150 160 170 180 190 210 220 230 240 250 260 pF1KE6 WTRGVSVWPVGLVGGLRFEGPQVQDGRVVGFHTAWEPSRPFPVDMAGFAVALPLLLDKPN :: ::::::::::: :.: : :..:.:::..:.:. .::: .:::::::.: ..:..:. CCDS49 TTRKVSVWPVGLVGGRRYERPLVENGKVVGWYTGWRADRPFAIDMAGFAVSLQVILSNPK 200 210 220 230 240 250 270 280 290 300 310 320 pF1KE6 AQFDSTAPR-GHLESSLLSHLVDPKDLEPRAANCTRVLVWHTRTEKPKMKQEEQLQRQGR : : . . : ::..:.... ..:::.: :::.:::::::::: .. .: . CCDS49 AVFKRRGSQPGMQESDFLKQITTVEELEPKANNCTKVLVWHTRTEKVNLANEPKYHLDTV 260 270 280 290 300 310 330 pF1KE6 GSDPAIEV CCDS49 KIEV 320 335 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:48:19 2016 done: Tue Nov 8 14:48:19 2016 Total Scan time: 2.430 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]