FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6514, 147 aa 1>>>pF1KE6514 147 - 147 aa - 147 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1843+/-0.000732; mu= 11.9768+/- 0.044 mean_var=58.7418+/-11.717, 0's: 0 Z-trim(108.0): 13 B-trim: 14 in 1/51 Lambda= 0.167340 statistics sampled from 9894 (9905) to 9894 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.304), width: 16 Scan time: 1.280 The best scores are: opt bits E(32554) CCDS7984.1 MS4A6E gene_id:245802|Hs108|chr11 ( 147) 928 231.8 1.1e-61 CCDS44616.1 MS4A6A gene_id:64231|Hs108|chr11 ( 178) 293 78.6 1.9e-15 CCDS44615.1 MS4A6A gene_id:64231|Hs108|chr11 ( 225) 293 78.6 2.3e-15 CCDS7981.1 MS4A6A gene_id:64231|Hs108|chr11 ( 248) 293 78.6 2.5e-15 CCDS58134.1 MS4A6A gene_id:64231|Hs108|chr11 ( 253) 293 78.7 2.6e-15 CCDS81568.1 MS4A6A gene_id:64231|Hs108|chr11 ( 276) 293 78.7 2.8e-15 >>CCDS7984.1 MS4A6E gene_id:245802|Hs108|chr11 (147 aa) initn: 928 init1: 928 opt: 928 Z-score: 1220.7 bits: 231.8 E(32554): 1.1e-61 Smith-Waterman score: 928; 100.0% identity (100.0% similar) in 147 aa overlap (1-147:1-147) 10 20 30 40 50 60 pF1KE6 MTSQPISNETIIMLPSNVINFSQAEKPEPTNQGQDSLKKRLQAKVKVIGVHSSLAGSILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 MTSQPISNETIIMLPSNVINFSQAEKPEPTNQGQDSLKKRLQAKVKVIGVHSSLAGSILS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 ALSALVGFILLSVNPAALNPASLQCKLDEKDIPTRLLLSYDYHSPYTMDCHRAKASLAGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 ALSALVGFILLSVNPAALNPASLQCKLDEKDIPTRLLLSYDYHSPYTMDCHRAKASLAGT 70 80 90 100 110 120 130 140 pF1KE6 LSLMLVSTVLEFCLAVLTAVLQWKQTV ::::::::::::::::::::::::::: CCDS79 LSLMLVSTVLEFCLAVLTAVLQWKQTV 130 140 >>CCDS44616.1 MS4A6A gene_id:64231|Hs108|chr11 (178 aa) initn: 316 init1: 277 opt: 293 Z-score: 390.9 bits: 78.6 E(32554): 1.9e-15 Smith-Waterman score: 317; 45.2% identity (54.8% similar) in 168 aa overlap (1-103:1-168) 10 20 30 40 pF1KE6 MTSQPISNETIIMLPSNVINFSQAEKPEPTNQGQDSLKKRLQAKVKVIG----------- :::::. :::::.::::::::::::::::::::::::::.:.:..:::: CCDS44 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQGQDSLKKHLHAEIKVIGTIQILCGMMVL 10 20 30 40 50 60 50 pF1KE6 -----------------------------------------------------VHSSLAG :::::.: CCDS44 SLGIILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSLVG 70 80 90 100 110 120 60 70 80 90 100 110 pF1KE6 SILSALSALVGFILLSVNPAALNPASLQ-CKLDEKDIPTRLLLSYDYHSPYTMDCHRAKA :::::::::::::.:::. :.::::::: .:.. :. . .: : CCDS44 SILSALSALVGFIILSVKQATLNPASLQWNSLSDADLHSAGILPSCAHCCAAVETGLL 130 140 150 160 170 120 130 140 pF1KE6 SLAGTLSLMLVSTVLEFCLAVLTAVLQWKQTV >>CCDS44615.1 MS4A6A gene_id:64231|Hs108|chr11 (225 aa) initn: 512 init1: 277 opt: 293 Z-score: 389.3 bits: 78.6 E(32554): 2.3e-15 Smith-Waterman score: 427; 50.3% identity (59.2% similar) in 179 aa overlap (1-114:1-179) 10 20 30 40 pF1KE6 MTSQPISNETIIMLPSNVINFSQAEKPEPTNQGQDSLKKRLQAKVKVIG----------- :::::. :::::.::::::::::::::::::::::::::.:.:..:::: CCDS44 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQGQDSLKKHLHAEIKVIGTIQILCGMMVL 10 20 30 40 50 60 50 pF1KE6 -----------------------------------------------------VHSSLAG :::::.: CCDS44 SLGIILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSLVG 70 80 90 100 110 120 60 70 80 90 100 110 pF1KE6 SILSALSALVGFILLSVNPAALNPASLQCKLDEKDIPTRLLLSYDYH-SPYTMDCHRAKA :::::::::::::.:::. :.::::::::.::...:::: .:: :: : :: ::. :: CCDS44 SILSALSALVGFIILSVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYTTDCYTAKA 130 140 150 160 170 180 120 130 140 pF1KE6 SLAGTLSLMLVSTVLEFCLAVLTAVLQWKQTV CCDS44 SLAGTLSLMLICTLLEFCLAVLTAVLRWKQAYSDFPGVSVLAGFT 190 200 210 220 >>CCDS7981.1 MS4A6A gene_id:64231|Hs108|chr11 (248 aa) initn: 512 init1: 277 opt: 293 Z-score: 388.6 bits: 78.6 E(32554): 2.5e-15 Smith-Waterman score: 427; 50.3% identity (59.2% similar) in 179 aa overlap (1-114:1-179) 10 20 30 40 pF1KE6 MTSQPISNETIIMLPSNVINFSQAEKPEPTNQGQDSLKKRLQAKVKVIG----------- :::::. :::::.::::::::::::::::::::::::::.:.:..:::: CCDS79 MTSQPVPNETIIVLPSNVINFSQAEKPEPTNQGQDSLKKHLHAEIKVIGTIQILCGMMVL 10 20 30 40 50 60 50 pF1KE6 -----------------------------------------------------VHSSLAG :::::.: CCDS79 SLGIILASASFSPNFTQVTSTLLNSAYPFIGPFFFIISGSLSIATEKRLTKLLVHSSLVG 70 80 90 100 110 120 60 70 80 90 100 110 pF1KE6 SILSALSALVGFILLSVNPAALNPASLQCKLDEKDIPTRLLLSYDYH-SPYTMDCHRAKA :::::::::::::.:::. :.::::::::.::...:::: .:: :: : :: ::. :: CCDS79 SILSALSALVGFIILSVKQATLNPASLQCELDKNNIPTRSYVSYFYHDSLYTTDCYTAKA 130 140 150 160 170 180 120 130 140 pF1KE6 SLAGTLSLMLVSTVLEFCLAVLTAVLQWKQTV CCDS79 SLAGTLSLMLICTLLEFCLAVLTAVLRWKQAYSDFPGSVLFLPHSYIGNSGMSSKMTHDC 190 200 210 220 230 240 >>CCDS58134.1 MS4A6A gene_id:64231|Hs108|chr11 (253 aa) initn: 512 init1: 277 opt: 293 Z-score: 388.5 bits: 78.7 E(32554): 2.6e-15 Smith-Waterman score: 427; 50.3% identity (59.2% similar) in 179 aa overlap (1-114:29-207) 10 20 30 pF1KE6 MTSQPISNETIIMLPSNVINFSQAEKPEPTNQ :::::. :::::.::::::::::::::::::: CCDS58 MVLLKLLEVYRKGSAGTFHKSTIFGNTIMTSQPVPNETIIVLPSNVINFSQAEKPEPTNQ 10 20 30 40 50 60 40 pF1KE6 GQDSLKKRLQAKVKVIG------------------------------------------- :::::::.:.:..:::: CCDS58 GQDSLKKHLHAEIKVIGTIQILCGMMVLSLGIILASASFSPNFTQVTSTLLNSAYPFIGP 70 80 90 100 110 120 50 60 70 80 pF1KE6 ---------------------VHSSLAGSILSALSALVGFILLSVNPAALNPASLQCKLD :::::.::::::::::::::.:::. :.::::::::.:: CCDS58 FFFIISGSLSIATEKRLTKLLVHSSLVGSILSALSALVGFIILSVKQATLNPASLQCELD 130 140 150 160 170 180 90 100 110 120 130 140 pF1KE6 EKDIPTRLLLSYDYH-SPYTMDCHRAKASLAGTLSLMLVSTVLEFCLAVLTAVLQWKQTV ...:::: .:: :: : :: ::. :: CCDS58 KNNIPTRSYVSYFYHDSLYTTDCYTAKASLAGTLSLMLICTLLEFCLAVLTAVLRWKQAY 190 200 210 220 230 240 >>CCDS81568.1 MS4A6A gene_id:64231|Hs108|chr11 (276 aa) initn: 498 init1: 277 opt: 293 Z-score: 387.9 bits: 78.7 E(32554): 2.8e-15 Smith-Waterman score: 427; 50.3% identity (59.2% similar) in 179 aa overlap (1-114:29-207) 10 20 30 pF1KE6 MTSQPISNETIIMLPSNVINFSQAEKPEPTNQ :::::. :::::.::::::::::::::::::: CCDS81 MVLLKLLEVYRKGSAGTFHKSTIFGNTIMTSQPVPNETIIVLPSNVINFSQAEKPEPTNQ 10 20 30 40 50 60 40 pF1KE6 GQDSLKKRLQAKVKVIG------------------------------------------- :::::::.:.:..:::: CCDS81 GQDSLKKHLHAEIKVIGTIQILCGMMVLSLGIILASASFSPNFTQVTSTLLNSAYPFIGP 70 80 90 100 110 120 50 60 70 80 pF1KE6 ---------------------VHSSLAGSILSALSALVGFILLSVNPAALNPASLQCKLD :::::.::::::::::::::.:::. :.::::::::.:: CCDS81 FFFIISGSLSIATEKRLTKLLVHSSLVGSILSALSALVGFIILSVKQATLNPASLQCELD 130 140 150 160 170 180 90 100 110 120 130 140 pF1KE6 EKDIPTRLLLSYDYH-SPYTMDCHRAKASLAGTLSLMLVSTVLEFCLAVLTAVLQWKQTV ...:::: .:: :: : :: ::. :: CCDS81 KNNIPTRSYVSYFYHDSLYTTDCYTAKASLAGTLSLMLICTLLEFCLAVLTAVLRWKQAY 190 200 210 220 230 240 147 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:59:52 2016 done: Tue Nov 8 13:59:53 2016 Total Scan time: 1.280 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]