FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6193, 90 aa 1>>>pF1KE6193 90 - 90 aa - 90 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0530+/-0.000266; mu= 9.9906+/- 0.017 mean_var=57.7348+/-11.103, 0's: 0 Z-trim(119.6): 14 B-trim: 0 in 0/54 Lambda= 0.168793 statistics sampled from 33799 (33813) to 33799 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.791), E-opt: 0.2 (0.396), width: 16 Scan time: 3.340 The best scores are: opt bits E(85289) NP_036588 (OMIM: 602251) mitochondrial import inne ( 90) 607 155.0 1.5e-38 NP_001291415 (OMIM: 607384) mitochondrial import i ( 89) 124 37.4 0.0038 NP_001291414 (OMIM: 607384) mitochondrial import i ( 89) 124 37.4 0.0038 NP_036592 (OMIM: 607384) mitochondrial import inne ( 89) 124 37.4 0.0038 NP_001291416 (OMIM: 607384) mitochondrial import i ( 89) 124 37.4 0.0038 >>NP_036588 (OMIM: 602251) mitochondrial import inner me (90 aa) initn: 607 init1: 607 opt: 607 Z-score: 813.0 bits: 155.0 E(85289): 1.5e-38 Smith-Waterman score: 607; 100.0% identity (100.0% similar) in 90 aa overlap (1-90:1-90) 10 20 30 40 50 60 pF1KE6 MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLD 10 20 30 40 50 60 70 80 90 pF1KE6 IHERMGKKLTELSMQDEELMKRVQQSSGPA :::::::::::::::::::::::::::::: NP_036 IHERMGKKLTELSMQDEELMKRVQQSSGPA 70 80 90 >>NP_001291415 (OMIM: 607384) mitochondrial import inner (89 aa) initn: 94 init1: 51 opt: 124 Z-score: 177.4 bits: 37.4 E(85289): 0.0038 Smith-Waterman score: 124; 28.8% identity (66.1% similar) in 59 aa overlap (22-80:21-78) 10 20 30 40 50 60 pF1KE6 MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLD ::..: .: :: . :.. :..: ..:..::: NP_001 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKD-FTTREVKPEETTCSEHCLQKYLK 10 20 30 40 50 70 80 90 pF1KE6 IHERMGKKLTELSMQDEELMKRVQQSSGPA . .:.. .. : .:..: . NP_001 MTQRISMRFQEYHIQQNEALAAKAGLLGQPR 60 70 80 >>NP_001291414 (OMIM: 607384) mitochondrial import inner (89 aa) initn: 94 init1: 51 opt: 124 Z-score: 177.4 bits: 37.4 E(85289): 0.0038 Smith-Waterman score: 124; 28.8% identity (66.1% similar) in 59 aa overlap (22-80:21-78) 10 20 30 40 50 60 pF1KE6 MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLD ::..: .: :: . :.. :..: ..:..::: NP_001 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKD-FTTREVKPEETTCSEHCLQKYLK 10 20 30 40 50 70 80 90 pF1KE6 IHERMGKKLTELSMQDEELMKRVQQSSGPA . .:.. .. : .:..: . NP_001 MTQRISMRFQEYHIQQNEALAAKAGLLGQPR 60 70 80 >>NP_036592 (OMIM: 607384) mitochondrial import inner me (89 aa) initn: 94 init1: 51 opt: 124 Z-score: 177.4 bits: 37.4 E(85289): 0.0038 Smith-Waterman score: 124; 28.8% identity (66.1% similar) in 59 aa overlap (22-80:21-78) 10 20 30 40 50 60 pF1KE6 MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLD ::..: .: :: . :.. :..: ..:..::: NP_036 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKD-FTTREVKPEETTCSEHCLQKYLK 10 20 30 40 50 70 80 90 pF1KE6 IHERMGKKLTELSMQDEELMKRVQQSSGPA . .:.. .. : .:..: . NP_036 MTQRISMRFQEYHIQQNEALAAKAGLLGQPR 60 70 80 >>NP_001291416 (OMIM: 607384) mitochondrial import inner (89 aa) initn: 94 init1: 51 opt: 124 Z-score: 177.4 bits: 37.4 E(85289): 0.0038 Smith-Waterman score: 124; 28.8% identity (66.1% similar) in 59 aa overlap (22-80:21-78) 10 20 30 40 50 60 pF1KE6 MDPLRAQQLAAELEVEMMADMYNRMTSACHRKCVPPHYKEAELSKGESVCLDRCVSKYLD ::..: .: :: . :.. :..: ..:..::: NP_001 MAAQIPESDQIKQFKEFLGTYNKLTETCFLDCVKD-FTTREVKPEETTCSEHCLQKYLK 10 20 30 40 50 70 80 90 pF1KE6 IHERMGKKLTELSMQDEELMKRVQQSSGPA . .:.. .. : .:..: . NP_001 MTQRISMRFQEYHIQQNEALAAKAGLLGQPR 60 70 80 90 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:14:08 2016 done: Tue Nov 8 10:14:09 2016 Total Scan time: 3.340 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]