FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6488, 559 aa 1>>>pF1KE6488 559 - 559 aa - 559 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2548+/-0.00043; mu= 18.9069+/- 0.027 mean_var=68.4644+/-14.405, 0's: 0 Z-trim(110.4): 62 B-trim: 58 in 1/51 Lambda= 0.155004 statistics sampled from 18652 (18705) to 18652 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.564), E-opt: 0.2 (0.219), width: 16 Scan time: 8.460 The best scores are: opt bits E(85289) NP_003618 (OMIM: 603733) large neutral amino acids ( 559) 3712 839.7 0 XP_016873940 (OMIM: 603733) PREDICTED: large neutr ( 559) 3712 839.7 0 NP_001185739 (OMIM: 603733) large neutral amino ac ( 559) 3712 839.7 0 XP_005274415 (OMIM: 603733) PREDICTED: large neutr ( 575) 3712 839.7 0 XP_016873941 (OMIM: 603733) PREDICTED: large neutr ( 528) 2503 569.3 1e-161 XP_011543622 (OMIM: 603733) PREDICTED: large neutr ( 544) 2503 569.3 1.1e-161 XP_016873942 (OMIM: 603733) PREDICTED: large neutr ( 303) 2003 457.4 3e-128 XP_011543624 (OMIM: 603733) PREDICTED: large neutr ( 303) 2003 457.4 3e-128 XP_011543623 (OMIM: 603733) PREDICTED: large neutr ( 303) 2003 457.4 3e-128 NP_001308293 (OMIM: 610791) large neutral amino ac ( 573) 1879 429.8 1.1e-119 NP_001271427 (OMIM: 610791) large neutral amino ac ( 573) 1879 429.8 1.1e-119 NP_001308294 (OMIM: 610791) large neutral amino ac ( 573) 1879 429.8 1.1e-119 NP_689559 (OMIM: 610791) large neutral amino acids ( 569) 1867 427.1 7.2e-119 XP_016879666 (OMIM: 610791) PREDICTED: large neutr ( 569) 1867 427.1 7.2e-119 XP_016879667 (OMIM: 610791) PREDICTED: large neutr ( 569) 1867 427.1 7.2e-119 XP_016879668 (OMIM: 610791) PREDICTED: large neutr ( 536) 1639 376.1 1.5e-103 NP_001271428 (OMIM: 610791) large neutral amino ac ( 432) 1328 306.5 1.1e-82 >>NP_003618 (OMIM: 603733) large neutral amino acids tra (559 aa) initn: 3712 init1: 3712 opt: 3712 Z-score: 4485.0 bits: 839.7 E(85289): 0 Smith-Waterman score: 3712; 100.0% identity (100.0% similar) in 559 aa overlap (1-559:1-559) 10 20 30 40 50 60 pF1KE6 MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEGFYSSTCPAESSTNTTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEGFYSSTCPAESSTNTTQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPRPVRLVGSACFTASCTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 DEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPRPVRLVGSACFTASCTL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 MALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLRSTLMALMIGSYASSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLRSTLMALMIGSYASSAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 TFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPAPEEVNYTKKIKLSGLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 TFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPAPEEVNYTKKIKLSGLA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 LDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGTSENLPERSVPLRKSLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 LDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGTSENLPERSVPLRKSLC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 SPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQKVAETVGFYSSVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 SPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQKVAETVGFYSSVFG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 AMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSIRPRYCKIQKLTNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 AMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSIRPRYCKIQKLTNAI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 SAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSLYAAVFPSNHFGTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 SAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSLYAAVFPSNHFGTLT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 GLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLLPSYLFYYRARLQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 GLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLLPSYLFYYRARLQQE 490 500 510 520 530 540 550 pF1KE6 YAANGMGPLKVLSGSEVTA ::::::::::::::::::: NP_003 YAANGMGPLKVLSGSEVTA 550 >>XP_016873940 (OMIM: 603733) PREDICTED: large neutral a (559 aa) initn: 3712 init1: 3712 opt: 3712 Z-score: 4485.0 bits: 839.7 E(85289): 0 Smith-Waterman score: 3712; 100.0% identity (100.0% similar) in 559 aa overlap (1-559:1-559) 10 20 30 40 50 60 pF1KE6 MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEGFYSSTCPAESSTNTTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEGFYSSTCPAESSTNTTQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPRPVRLVGSACFTASCTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPRPVRLVGSACFTASCTL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 MALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLRSTLMALMIGSYASSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLRSTLMALMIGSYASSAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 TFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPAPEEVNYTKKIKLSGLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPAPEEVNYTKKIKLSGLA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 LDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGTSENLPERSVPLRKSLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGTSENLPERSVPLRKSLC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 SPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQKVAETVGFYSSVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQKVAETVGFYSSVFG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 AMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSIRPRYCKIQKLTNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSIRPRYCKIQKLTNAI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 SAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSLYAAVFPSNHFGTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSLYAAVFPSNHFGTLT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 GLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLLPSYLFYYRARLQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLLPSYLFYYRARLQQE 490 500 510 520 530 540 550 pF1KE6 YAANGMGPLKVLSGSEVTA ::::::::::::::::::: XP_016 YAANGMGPLKVLSGSEVTA 550 >>NP_001185739 (OMIM: 603733) large neutral amino acids (559 aa) initn: 3712 init1: 3712 opt: 3712 Z-score: 4485.0 bits: 839.7 E(85289): 0 Smith-Waterman score: 3712; 100.0% identity (100.0% similar) in 559 aa overlap (1-559:1-559) 10 20 30 40 50 60 pF1KE6 MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEGFYSSTCPAESSTNTTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEGFYSSTCPAESSTNTTQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPRPVRLVGSACFTASCTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPRPVRLVGSACFTASCTL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 MALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLRSTLMALMIGSYASSAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLRSTLMALMIGSYASSAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 TFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPAPEEVNYTKKIKLSGLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPAPEEVNYTKKIKLSGLA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 LDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGTSENLPERSVPLRKSLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGTSENLPERSVPLRKSLC 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 SPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQKVAETVGFYSSVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQKVAETVGFYSSVFG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 AMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSIRPRYCKIQKLTNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSIRPRYCKIQKLTNAI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 SAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSLYAAVFPSNHFGTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSLYAAVFPSNHFGTLT 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 GLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLLPSYLFYYRARLQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLLPSYLFYYRARLQQE 490 500 510 520 530 540 550 pF1KE6 YAANGMGPLKVLSGSEVTA ::::::::::::::::::: NP_001 YAANGMGPLKVLSGSEVTA 550 >>XP_005274415 (OMIM: 603733) PREDICTED: large neutral a (575 aa) initn: 3712 init1: 3712 opt: 3712 Z-score: 4484.8 bits: 839.7 E(85289): 0 Smith-Waterman score: 3712; 100.0% identity (100.0% similar) in 559 aa overlap (1-559:17-575) 10 20 30 40 pF1KE6 MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEG :::::::::::::::::::::::::::::::::::::::::::: XP_005 MRIPSPPGRSDWLGASMAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEG 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 FYSSTCPAESSTNTTQDEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 FYSSTCPAESSTNTTQDEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPR 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE6 PVRLVGSACFTASCTLMALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PVRLVGSACFTASCTLMALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLR 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE6 STLMALMIGSYASSAITFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 STLMALMIGSYASSAITFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPA 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE6 PEEVNYTKKIKLSGLALDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 PEEVNYTKKIKLSGLALDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGT 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE6 SENLPERSVPLRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SENLPERSVPLRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQ 310 320 330 340 350 360 350 360 370 380 390 400 pF1KE6 QQKVAETVGFYSSVFGAMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QQKVAETVGFYSSVFGAMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATK 370 380 390 400 410 420 410 420 430 440 450 460 pF1KE6 SIRPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SIRPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACG 430 440 450 460 470 480 470 480 490 500 510 520 pF1KE6 SLYAAVFPSNHFGTLTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SLYAAVFPSNHFGTLTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGF 490 500 510 520 530 540 530 540 550 pF1KE6 LLPSYLFYYRARLQQEYAANGMGPLKVLSGSEVTA ::::::::::::::::::::::::::::::::::: XP_005 LLPSYLFYYRARLQQEYAANGMGPLKVLSGSEVTA 550 560 570 >>XP_016873941 (OMIM: 603733) PREDICTED: large neutral a (528 aa) initn: 2503 init1: 2503 opt: 2503 Z-score: 3024.2 bits: 569.3 E(85289): 1e-161 Smith-Waterman score: 3444; 94.5% identity (94.5% similar) in 559 aa overlap (1-559:1-528) 10 20 30 40 50 60 pF1KE6 MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEGFYSSTCPAESSTNTTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEGFYSSTCPAESSTNTTQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 DEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPRPVRLVGSACFTASCTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPRPVRLVGSACFTASCTL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 MALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLRSTLMALMIGSYASSAI :::::::::::::::::::::::::::::::::::: XP_016 MALASRDVEALSPLIFLALSLNGFGGICLTFTSLTL------------------------ 130 140 150 190 200 210 220 230 240 pF1KE6 TFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPAPEEVNYTKKIKLSGLA ::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 -------IYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPAPEEVNYTKKIKLSGLA 160 170 180 190 200 250 260 270 280 290 300 pF1KE6 LDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGTSENLPERSVPLRKSLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGTSENLPERSVPLRKSLC 210 220 230 240 250 260 310 320 330 340 350 360 pF1KE6 SPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQKVAETVGFYSSVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQKVAETVGFYSSVFG 270 280 290 300 310 320 370 380 390 400 410 420 pF1KE6 AMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSIRPRYCKIQKLTNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSIRPRYCKIQKLTNAI 330 340 350 360 370 380 430 440 450 460 470 480 pF1KE6 SAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSLYAAVFPSNHFGTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSLYAAVFPSNHFGTLT 390 400 410 420 430 440 490 500 510 520 530 540 pF1KE6 GLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLLPSYLFYYRARLQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLLPSYLFYYRARLQQE 450 460 470 480 490 500 550 pF1KE6 YAANGMGPLKVLSGSEVTA ::::::::::::::::::: XP_016 YAANGMGPLKVLSGSEVTA 510 520 >>XP_011543622 (OMIM: 603733) PREDICTED: large neutral a (544 aa) initn: 2503 init1: 2503 opt: 2503 Z-score: 3024.0 bits: 569.3 E(85289): 1.1e-161 Smith-Waterman score: 3444; 94.5% identity (94.5% similar) in 559 aa overlap (1-559:17-544) 10 20 30 40 pF1KE6 MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEG :::::::::::::::::::::::::::::::::::::::::::: XP_011 MRIPSPPGRSDWLGASMAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEG 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 FYSSTCPAESSTNTTQDEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FYSSTCPAESSTNTTQDEQRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPR 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE6 PVRLVGSACFTASCTLMALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLR :::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PVRLVGSACFTASCTLMALASRDVEALSPLIFLALSLNGFGGICLTFTSLTL-------- 130 140 150 160 170 170 180 190 200 210 220 pF1KE6 STLMALMIGSYASSAITFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPA ::::::::::::::::::::::::::::::::::::: XP_011 -----------------------IYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPA 180 190 200 230 240 250 260 270 280 pF1KE6 PEEVNYTKKIKLSGLALDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PEEVNYTKKIKLSGLALDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGT 210 220 230 240 250 260 290 300 310 320 330 340 pF1KE6 SENLPERSVPLRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SENLPERSVPLRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQ 270 280 290 300 310 320 350 360 370 380 390 400 pF1KE6 QQKVAETVGFYSSVFGAMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QQKVAETVGFYSSVFGAMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATK 330 340 350 360 370 380 410 420 430 440 450 460 pF1KE6 SIRPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SIRPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACG 390 400 410 420 430 440 470 480 490 500 510 520 pF1KE6 SLYAAVFPSNHFGTLTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SLYAAVFPSNHFGTLTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGF 450 460 470 480 490 500 530 540 550 pF1KE6 LLPSYLFYYRARLQQEYAANGMGPLKVLSGSEVTA ::::::::::::::::::::::::::::::::::: XP_011 LLPSYLFYYRARLQQEYAANGMGPLKVLSGSEVTA 510 520 530 540 >>XP_016873942 (OMIM: 603733) PREDICTED: large neutral a (303 aa) initn: 2003 init1: 2003 opt: 2003 Z-score: 2423.4 bits: 457.4 E(85289): 3e-128 Smith-Waterman score: 2003; 100.0% identity (100.0% similar) in 303 aa overlap (257-559:1-303) 230 240 250 260 270 280 pF1KE6 EVNYTKKIKLSGLALDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGTSE :::::::::::::::::::::::::::::: XP_016 MGQRLSQKAPSLEDGSDAFMSPQDVRGTSE 10 20 30 290 300 310 320 330 340 pF1KE6 NLPERSVPLRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NLPERSVPLRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQ 40 50 60 70 80 90 350 360 370 380 390 400 pF1KE6 KVAETVGFYSSVFGAMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KVAETVGFYSSVFGAMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSI 100 110 120 130 140 150 410 420 430 440 450 460 pF1KE6 RPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSL 160 170 180 190 200 210 470 480 490 500 510 520 pF1KE6 YAAVFPSNHFGTLTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YAAVFPSNHFGTLTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLL 220 230 240 250 260 270 530 540 550 pF1KE6 PSYLFYYRARLQQEYAANGMGPLKVLSGSEVTA ::::::::::::::::::::::::::::::::: XP_016 PSYLFYYRARLQQEYAANGMGPLKVLSGSEVTA 280 290 300 >>XP_011543624 (OMIM: 603733) PREDICTED: large neutral a (303 aa) initn: 2003 init1: 2003 opt: 2003 Z-score: 2423.4 bits: 457.4 E(85289): 3e-128 Smith-Waterman score: 2003; 100.0% identity (100.0% similar) in 303 aa overlap (257-559:1-303) 230 240 250 260 270 280 pF1KE6 EVNYTKKIKLSGLALDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGTSE :::::::::::::::::::::::::::::: XP_011 MGQRLSQKAPSLEDGSDAFMSPQDVRGTSE 10 20 30 290 300 310 320 330 340 pF1KE6 NLPERSVPLRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NLPERSVPLRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQ 40 50 60 70 80 90 350 360 370 380 390 400 pF1KE6 KVAETVGFYSSVFGAMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KVAETVGFYSSVFGAMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSI 100 110 120 130 140 150 410 420 430 440 450 460 pF1KE6 RPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSL 160 170 180 190 200 210 470 480 490 500 510 520 pF1KE6 YAAVFPSNHFGTLTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YAAVFPSNHFGTLTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLL 220 230 240 250 260 270 530 540 550 pF1KE6 PSYLFYYRARLQQEYAANGMGPLKVLSGSEVTA ::::::::::::::::::::::::::::::::: XP_011 PSYLFYYRARLQQEYAANGMGPLKVLSGSEVTA 280 290 300 >>XP_011543623 (OMIM: 603733) PREDICTED: large neutral a (303 aa) initn: 2003 init1: 2003 opt: 2003 Z-score: 2423.4 bits: 457.4 E(85289): 3e-128 Smith-Waterman score: 2003; 100.0% identity (100.0% similar) in 303 aa overlap (257-559:1-303) 230 240 250 260 270 280 pF1KE6 EVNYTKKIKLSGLALDHKVTGDLFYTHVTTMGQRLSQKAPSLEDGSDAFMSPQDVRGTSE :::::::::::::::::::::::::::::: XP_011 MGQRLSQKAPSLEDGSDAFMSPQDVRGTSE 10 20 30 290 300 310 320 330 340 pF1KE6 NLPERSVPLRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NLPERSVPLRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQ 40 50 60 70 80 90 350 360 370 380 390 400 pF1KE6 KVAETVGFYSSVFGAMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KVAETVGFYSSVFGAMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSI 100 110 120 130 140 150 410 420 430 440 450 460 pF1KE6 RPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSL 160 170 180 190 200 210 470 480 490 500 510 520 pF1KE6 YAAVFPSNHFGTLTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YAAVFPSNHFGTLTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLL 220 230 240 250 260 270 530 540 550 pF1KE6 PSYLFYYRARLQQEYAANGMGPLKVLSGSEVTA ::::::::::::::::::::::::::::::::: XP_011 PSYLFYYRARLQQEYAANGMGPLKVLSGSEVTA 280 290 300 >>NP_001308293 (OMIM: 610791) large neutral amino acids (573 aa) initn: 1960 init1: 1067 opt: 1879 Z-score: 2269.5 bits: 429.8 E(85289): 1.1e-119 Smith-Waterman score: 2143; 59.4% identity (81.1% similar) in 562 aa overlap (1-540:1-549) 10 20 30 40 50 pF1KE6 MAPTLQQAYRRRWWMACTAVLENLFFSAVLLGWGSLLIILKNEGFYSSTCPA-ESSTNTT ::::: :.:::::::::::::::.:::::::::::::.::.::::: : :. :: : NP_001 MAPTLATAHRRRWWMACTAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGT 10 20 30 40 50 60 60 70 80 90 100 pF1KE6 --------QDE---QRRWPGCDQQDEMLNLGFTIGSFVLSATTLPLGILMDRFGPRPVRL ..: . : .:. :::::::.::.:::.::: ::::::.::..::: .:: NP_001 VGGTAEPGHEEVSWMNGWLSCQAQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRL 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE6 VGSACFTASCTLMALASRDVEALSPLIFLALSLNGFGGICLTFTSLTLPNMFGNLRSTLM .:::::..:: :.: .. .::: :::.::.::::::.:.::::::::::::.::::.. NP_001 LGSACFAVSCLLIAYGASKPNALSVLIFIALALNGFGGMCMTFTSLTLPNMFGDLRSTFI 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE6 ALMIGSYASSAITFPGIKLIYDAGVAFVVIMFTWSGLACLIFLNCTLNWPIEAFPAPEEV :::::::::::.:::::::::::::.:.:.. .:.: . :.:::: .:::.: ::.::.. NP_001 ALMIGSYASSAVTFPGIKLIYDAGVSFIVVLVVWAGCSGLVFLNCFFNWPLEPFPGPEDM 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE6 NYTKKIKLSGLALDHKVTGDLFYTHVTTMGQRLS--------QKAPSLEDGSDAFMSPQD .:. :::.: :..:::.:: :: .:::.:.::: .. .:..: .: : NP_001 DYSVKIKFSWLGFDHKITGKQFYKQVTTVGRRLSVGSSMRSAKEQVALQEGHKLCLSTVD 250 260 270 280 290 300 290 300 310 320 330 pF1KE6 VRGTSENLPERSV-P-LRKSLCSPTFLWSLLTMGMTQLRIIFYMAAVNKMLEYLVTGGQE .. . :. .: : . .:. :: .: ::.:: .::::.::::.:.:..:..::.: NP_001 LEVKCQ--PDAAVAPSFMHSVFSPILLLSLVTMCVTQLRLIFYMGAMNNILKFLVSG--- 310 320 330 340 350 340 350 360 370 380 390 pF1KE6 HETNEQQQKVAETVGFYSSVFGAMQLLCLLTCPLIGYIMDWRIKDCVDAPTQGTVLGDAR .:. : :::.:.:.::..::::::: :.::::::::.:.: :: .. :: NP_001 -----DQKTVMATVGLYTSIFGVLQLLCLLTAPVIGYIMDWRLKECEDA-SEEPEEKDAN 360 370 380 390 400 400 410 420 430 440 450 pF1KE6 DGVATKSIRPRYCKIQKLTNAISAFTLTNLLLVGFGITCLINNLHLQFVTFVLHTIVRGF .: :. : : .:::.:::. ::..:::::::::.:::: :: ::...:.:::::::: NP_001 QGEKKKKKRDR--QIQKITNAMRAFAFTNLLLVGFGVTCLIPNLPLQILSFILHTIVRGF 410 420 430 440 450 460 460 470 480 490 500 510 pF1KE6 FHSACGSLYAAVFPSNHFGTLTGLQSLISAVFALLQQPLFMAMVGPLKGEPFWVNLGLLL .::: :.:::::.::..::.::::::::::.:::::::::.::.:::.:.:.:::.:::: NP_001 IHSAVGGLYAAVYPSTQFGSLTGLQSLISALFALLQQPLFLAMMGPLQGDPLWVNVGLLL 470 480 490 500 510 520 520 530 540 550 pF1KE6 FSLLGFLLPSYLFYYRARLQQEYAANGMGPLKVLSGSEVTA .::::: :: ::. :: .:... NP_001 LSLLGFCLPLYLICYRRQLERQLQQRQEDDKLFLKINGSSNQEAFV 530 540 550 560 570 559 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:47:50 2016 done: Tue Nov 8 13:47:51 2016 Total Scan time: 8.460 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]