################################## # NO CUT ENZYMES ( 115 enzymes) # ################################## AatII Acc65I AccIII AclI AflII AgeI AhdI Aor51HI AscI AseI AsnI Asp718I AspEI AspI AviII BamHI BbrPI BbsI BcgI BclI BfrI BglI BglII BlpI Bpu1102I BpuAI BsaBI BseAI BsgI BsiEI BsmBI Bsp1407I BspDI BspEI BspHI BsrFI BsrGI BssHII BssSI Bst1107I BstBI BstEII BstPI BstZ17I CelII Cfr10I ClaI CpoI DraI DrdI EagI Eam1105I EclXI Eco47III Eco52I EcoNI EcoO65I EcoRV EcoT22I FbaI FseI FspI HincII HindII HpaI KpnI KspI MamI MfeI MluI MroI MslI MunI NaeI NdeI NgoMIV NheI NotI NruI NsiI NspV PacI PflFI PflMI PinAI PmaCI PmeI PmlI PshAI PshBI Psp1406I PvuI RcaI RsrII SacII SalI SbfI ScaI SexAI SfiI SfuI SgrAI SmaI SnaBI SpeI SphI Sse8387I SspBI SspI SwaI Tth111I Van91I XbaI XmaCI XmaI ################################### # ONE CUT ENZYMES ( 52 enzymes) # ################################### AccI 537 GTCTAC GT^[AC][GT]AC AflIII 1301 ACATGT A^C[GA][CT]GT Alw44I 154 GTGCAC G^TGCAC AocI 1091 CCTTAGG CC^T[ACGT]AGG ApaI 695 GGGCCC GGGCC^C ApaLI 154 GTGCAC G^TGCAC Asp700I 216 GAACTGGTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC AvaI 1246 CTCGAG C^[CT]CG[GA]G AvrII 690 CCTAGG C^CTAGG BalI 1517 TGGCCA TGG^CCA BbeI 88 GGCGCC GGCGC^C BbvCI 228 GCTGAGG CCTCAGC(-5/-2) BlnI 690 CCTAGG C^CTAGG BpmI 841 CTCCAG CTGGAG(16/14) BsaAI 117 CACGTA [CT]AC^GT[GA] BsaI 1343 GGTCTC GGTCTC(1/5) BsaWI 1214 ACCGGA [AT]^CCGG[AT] BsiWI 119 CGTACG C^GTACG BsmI 252 GAATGC GAATGC(1/-1) BsoBI 1246 CTCGAG C^[CT]CG[GA]G BspLU11I 1301 ACATGT A^CATGT BsrDI 1464 CATTGC GCAATG(2/0) BstAPI 775 GCAGCCGATGC GCA[ACGT][ACGT][ACGT][ACGT]^[ACGT]TGC BstYI 350 AGATCC [GA]^GATC[CT] Bsu36I 1091 CCTTAGG CC^T[ACGT]AGG DraIII 952 CACTCCGTG CAC[ACGT][ACGT][ACGT]^GTG DsaI 806 CCATGG C^C[GA][CT]GG EaeI 1517 TGGCCA [CT]^GGCC[GA] EarI 1383 CTCTTC CTCTTC(1/4) Eco81I 1091 CCTTAGG CC^T[ACGT]AGG EcoRI 1533 GAATTC G^AATTC HaeII 88 GGCGCC [GA]GCGC^[CT] HindIII 1101 AAGCTT A^AGCTT KasI 88 GGCGCC G^GCGCC Ksp632I 1383 CTCTTC CTCTTC(1/4) MaeIII 1171 GTGAC ^GT[ACGT]AC MflI 350 AGATCC [GA]^GATC[CT] MluNI 1517 TGGCCA TGG^CCA MscI 1517 TGGCCA TGG^CCA NarI 88 GGCGCC GG^CGCC NcoI 806 CCATGG C^CATGG NspI 1301 ACATGT [GA]CATG^[CT] PaeR7I 1246 CTCGAG C^TCGAG PpuMI 517 GGGACCC [GA]G^G[AT]CC[CT] PstI 1351 CTGCAG CTGCA^G SapI 1382 GCTCTTC GCTCTTC(1/4) SfoI 88 GGCGCC GGC^GCC Tsp45I 1171 GTGAC ^GT[GC]AC XcmI 605 CCAAAGCCTCACTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT][ACGT][ACGT][ACGT]TGG XhoI 1246 CTCGAG C^TCGAG XhoII 350 AGATCC [GA]^GATC[CT] XmnI 216 GAACTGGTTC GAA[ACGT][ACGT]^[ACGT][ACGT]TTC ################################### # TWO CUT ENZYMES ( 28 enzymes) # ################################### AccII 52 CGCG CG^CG 1262 CGCG AcsI 1270 AAATTC [GA]^AATT[CT] 1533 GAATTC AcyI 88 GGCGCC G[GA]^CG[CT]C 169 GGCGTC AlwI 351 GATCC GGATC(4/5) 1545 GGATC ApoI 1270 AAATTC [GA]^AATT[CT] 1533 GAATTC BciVI 1119 GGATAC GTATCC(6/5) 931 GTATCC BcnI 149 CCGGG CC^[GC]GG 342 CCGGG BsaHI 88 GGCGCC G[GA]^CG[CT]C 169 GGCGTC BseRI 799 GAGGAG GAGGAG(10/8) 1153 GAGGAG BsmAI 946 GTCTC GTCTC(1/5) 1344 GTCTC BsmFI 517 GGGAC GGGAC(10/14) 1400 GGGAC BsrBI 159 CCGCTC CCGCTC(-3/-3) 733 GAGCGG BstUI 52 CGCG CG^CG 1262 CGCG BstXI 194 CCACAGAGTTGG CCA[ACGT][ACGT][ACGT][ACGT][ACGT]^[ACGT]TGG 818 CCATGCGTCTGG DraII 517 GGGACCC [GA]G^G[ACGT]CC[CT] 694 GGGGCCC EcoO109I 517 GGGACCC [GA]G^G[ACGT]CC[CT] 694 GGGGCCC EcoT14I 690 CCTAGG C^C[AT][AT]GG 806 CCATGG Hin1I 88 GGCGCC G[GA]^CG[CT]C 169 GGCGTC MaeII 118 ACGT A^CGT 1445 ACGT MseI 41 TTAA T^TAA 1475 TTAA MvnI 52 CGCG CG^CG 1262 CGCG NciI 149 CCGGG CC^[GC]GG 342 CCGGG SmlI 1179 CTCAAG C^T[CT][GA]AG 1246 CTCGAG StyI 690 CCTAGG C^C[AT][AT]GG 806 CCATGG TaqI 80 TCGA T^CGA 1247 TCGA Tru9I 41 TTAA T^TAA 1475 TTAA Tsp509I 1271 AATT ^AATT 1534 AATT TthHB8I 80 TCGA T^CGA 1247 TCGA ######################################### # 3 OR MORE CUT ENZYMES ( 63 enzymes) # ######################################### AciI AfaI AluI AlwNI AspHI AvaII BanI BanII BbvI BfaI BmyI BsaJI BsiHKAI BsiYI BslI Bsp1286I BspMI BsrI BssKI BstF5I BstNI Cac8I CfoI Cfr13I DdeI DpnII EcoRII FauI Fnu4HI FokI HaeIII HapII HgaI HhaI HinP1I HinfI HpaII HphI ItaI MaeI MboI MboII MnlI MspA1I MspI MvaI MwoI NdeII NlaIII NlaIV PleI PvuII RsaI SacI Sau3AI Sau96I ScrFI SfaNI SfcI StuI TfiI TseI TspRI