FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6617, 336 aa 1>>>pF1KE6617 336 - 336 aa - 336 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6366+/-0.000729; mu= 14.7493+/- 0.044 mean_var=73.4039+/-14.392, 0's: 0 Z-trim(109.7): 12 B-trim: 2 in 1/48 Lambda= 0.149697 statistics sampled from 11092 (11099) to 11092 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.709), E-opt: 0.2 (0.341), width: 16 Scan time: 2.760 The best scores are: opt bits E(32554) CCDS31472.1 PEX16 gene_id:9409|Hs108|chr11 ( 336) 2233 491.2 5.1e-139 CCDS7917.1 PEX16 gene_id:9409|Hs108|chr11 ( 346) 2083 458.8 3e-129 >>CCDS31472.1 PEX16 gene_id:9409|Hs108|chr11 (336 aa) initn: 2233 init1: 2233 opt: 2233 Z-score: 2609.2 bits: 491.2 E(32554): 5.1e-139 Smith-Waterman score: 2233; 99.7% identity (100.0% similar) in 336 aa overlap (1-336:1-336) 10 20 30 40 50 60 pF1KE6 MEKLRLLGLRYQEYVTRHPAATAQLETAVRGFSYLLAGRFADSHELSELVYSASNLLVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MEKLRLLGLRYQEYVTRHPAATAQLETAVRGFSYLLAGRFADSHELSELVYSASNLLVLL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NDGILRKELRKKLPVSLSQQKLLTWLSVLECVEVFMEMGAAKVWGEVGRWLVIALIQLAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: CCDS31 NDGILRKELRKKLPVSLSQQKLLTWLSVLECVEVFMEMGAAKVWGEVGRWLVIALVQLAK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 AVLRMLLLLWFKAGLQTSPPIVPLDRETQAQPPDGDHSPGNHEQSYVGKRSNRVVRTLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 AVLRMLLLLWFKAGLQTSPPIVPLDRETQAQPPDGDHSPGNHEQSYVGKRSNRVVRTLQN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 TPSLHSRHWGAPQQREGRQQQHHEELSATPTPLGLQETIAEFLYIARPLLHLLSLGLWGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 TPSLHSRHWGAPQQREGRQQQHHEELSATPTPLGLQETIAEFLYIARPLLHLLSLGLWGQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 RSWKPWLLAGVVDVTSLSLLSDRKGLTRRERRELRRRTILLLYYLLRSPFYDRFSEARIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RSWKPWLLAGVVDVTSLSLLSDRKGLTRRERRELRRRTILLLYYLLRSPFYDRFSEARIL 250 260 270 280 290 300 310 320 330 pF1KE6 FLLQLLADHVPGVGLVTRPLMDYLPTWQKIYFYSWG :::::::::::::::::::::::::::::::::::: CCDS31 FLLQLLADHVPGVGLVTRPLMDYLPTWQKIYFYSWG 310 320 330 >>CCDS7917.1 PEX16 gene_id:9409|Hs108|chr11 (346 aa) initn: 2083 init1: 2083 opt: 2083 Z-score: 2434.0 bits: 458.8 E(32554): 3e-129 Smith-Waterman score: 2083; 99.7% identity (100.0% similar) in 317 aa overlap (1-317:1-317) 10 20 30 40 50 60 pF1KE6 MEKLRLLGLRYQEYVTRHPAATAQLETAVRGFSYLLAGRFADSHELSELVYSASNLLVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 MEKLRLLGLRYQEYVTRHPAATAQLETAVRGFSYLLAGRFADSHELSELVYSASNLLVLL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 NDGILRKELRKKLPVSLSQQKLLTWLSVLECVEVFMEMGAAKVWGEVGRWLVIALIQLAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: CCDS79 NDGILRKELRKKLPVSLSQQKLLTWLSVLECVEVFMEMGAAKVWGEVGRWLVIALVQLAK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 AVLRMLLLLWFKAGLQTSPPIVPLDRETQAQPPDGDHSPGNHEQSYVGKRSNRVVRTLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 AVLRMLLLLWFKAGLQTSPPIVPLDRETQAQPPDGDHSPGNHEQSYVGKRSNRVVRTLQN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 TPSLHSRHWGAPQQREGRQQQHHEELSATPTPLGLQETIAEFLYIARPLLHLLSLGLWGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 TPSLHSRHWGAPQQREGRQQQHHEELSATPTPLGLQETIAEFLYIARPLLHLLSLGLWGQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 RSWKPWLLAGVVDVTSLSLLSDRKGLTRRERRELRRRTILLLYYLLRSPFYDRFSEARIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS79 RSWKPWLLAGVVDVTSLSLLSDRKGLTRRERRELRRRTILLLYYLLRSPFYDRFSEARIL 250 260 270 280 290 300 310 320 330 pF1KE6 FLLQLLADHVPGVGLVTRPLMDYLPTWQKIYFYSWG ::::::::::::::::: CCDS79 FLLQLLADHVPGVGLVTTSQRAASPCLPARPHTQPWSPPAFLPGHP 310 320 330 340 336 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:49:08 2016 done: Tue Nov 8 14:49:09 2016 Total Scan time: 2.760 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]