FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4091, 458 aa 1>>>pF1KE4091 458 - 458 aa - 458 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9650+/-0.000326; mu= 20.2952+/- 0.020 mean_var=73.2172+/-14.688, 0's: 0 Z-trim(116.9): 138 B-trim: 433 in 2/51 Lambda= 0.149888 statistics sampled from 28265 (28406) to 28265 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.333), width: 16 Scan time: 9.020 The best scores are: opt bits E(85289) NP_036271 (OMIM: 606051) secretion-regulating guan ( 458) 3218 705.0 1.1e-202 NP_001273760 (OMIM: 603524) RCC1 and BTB domain-co ( 527) 354 85.7 3.2e-16 XP_005266301 (OMIM: 603524) PREDICTED: RCC1 and BT ( 527) 354 85.7 3.2e-16 XP_006719822 (OMIM: 603524) PREDICTED: RCC1 and BT ( 551) 354 85.7 3.3e-16 XP_005266299 (OMIM: 603524) PREDICTED: RCC1 and BT ( 551) 354 85.7 3.3e-16 NP_001259 (OMIM: 603524) RCC1 and BTB domain-conta ( 551) 354 85.7 3.3e-16 XP_016875862 (OMIM: 603524) PREDICTED: RCC1 and BT ( 555) 354 85.8 3.3e-16 XP_016875861 (OMIM: 603524) PREDICTED: RCC1 and BT ( 556) 354 85.8 3.3e-16 XP_016875860 (OMIM: 603524) PREDICTED: RCC1 and BT ( 556) 354 85.8 3.3e-16 XP_011533196 (OMIM: 603524) PREDICTED: RCC1 and BT ( 556) 354 85.8 3.3e-16 NP_001273759 (OMIM: 603524) RCC1 and BTB domain-co ( 556) 354 85.8 3.3e-16 XP_016875858 (OMIM: 603524) PREDICTED: RCC1 and BT ( 561) 354 85.8 3.4e-16 XP_016875859 (OMIM: 603524) PREDICTED: RCC1 and BT ( 561) 354 85.8 3.4e-16 NP_001158608 (OMIM: 609249) probable E3 ubiquitin- ( 986) 329 80.6 2.2e-14 NP_060382 (OMIM: 609249) probable E3 ubiquitin-pro (1022) 329 80.6 2.2e-14 NP_057407 (OMIM: 608242) E3 ISG15--protein ligase (1024) 327 80.1 3e-14 XP_011530324 (OMIM: 608242) PREDICTED: E3 ISG15--p (1100) 327 80.2 3.2e-14 NP_001316167 (OMIM: 609798,614262,617022,617025) s ( 861) 316 77.7 1.4e-13 XP_016875865 (OMIM: 603524) PREDICTED: RCC1 and BT ( 324) 311 76.3 1.4e-13 NP_149107 (OMIM: 609798,614262,617022,617025) seri ( 979) 316 77.7 1.5e-13 XP_016875863 (OMIM: 603524) PREDICTED: RCC1 and BT ( 340) 310 76.1 1.7e-13 XP_016875864 (OMIM: 603524) PREDICTED: RCC1 and BT ( 340) 310 76.1 1.7e-13 XP_011533436 (OMIM: 103780,607867) PREDICTED: RCC1 ( 531) 311 76.4 2e-13 NP_060661 (OMIM: 103780,607867) RCC1 and BTB domai ( 531) 311 76.4 2e-13 XP_005266498 (OMIM: 103780,607867) PREDICTED: RCC1 ( 531) 311 76.4 2e-13 XP_011533435 (OMIM: 103780,607867) PREDICTED: RCC1 ( 531) 311 76.4 2e-13 XP_011533437 (OMIM: 103780,607867) PREDICTED: RCC1 ( 402) 307 75.5 3e-13 XP_016875866 (OMIM: 603524) PREDICTED: RCC1 and BT ( 285) 305 74.9 3.1e-13 NP_003913 (OMIM: 605109,617011) probable E3 ubiqui (4861) 319 79.0 3.2e-13 XP_016878194 (OMIM: 605109,617011) PREDICTED: prob (4883) 319 79.0 3.2e-13 XP_016878193 (OMIM: 605109,617011) PREDICTED: prob (4885) 319 79.0 3.2e-13 XP_016878192 (OMIM: 605109,617011) PREDICTED: prob (4891) 319 79.0 3.2e-13 XP_016878190 (OMIM: 605109,617011) PREDICTED: prob (4892) 319 79.0 3.2e-13 XP_016878191 (OMIM: 605109,617011) PREDICTED: prob (4892) 319 79.0 3.2e-13 XP_016878189 (OMIM: 605109,617011) PREDICTED: prob (4897) 319 79.0 3.2e-13 XP_016878188 (OMIM: 605109,617011) PREDICTED: prob (4909) 319 79.0 3.2e-13 NP_001305434 (OMIM: 605200) probable E3 ubiquitin- ( 368) 306 75.2 3.3e-13 XP_005263389 (OMIM: 605200) PREDICTED: probable E3 ( 896) 305 75.3 7.4e-13 XP_005263388 (OMIM: 605200) PREDICTED: probable E3 ( 903) 305 75.3 7.4e-13 XP_016864296 (OMIM: 605200) PREDICTED: probable E3 ( 924) 305 75.3 7.5e-13 NP_001258531 (OMIM: 605200) probable E3 ubiquitin- ( 932) 305 75.3 7.6e-13 XP_005263387 (OMIM: 605200) PREDICTED: probable E3 ( 993) 305 75.4 7.9e-13 XP_005263386 (OMIM: 605200) PREDICTED: probable E3 (1042) 305 75.4 8.2e-13 XP_016864295 (OMIM: 605200) PREDICTED: probable E3 (1042) 305 75.4 8.2e-13 NP_055421 (OMIM: 605200) probable E3 ubiquitin-pro (1050) 305 75.4 8.3e-13 XP_005263384 (OMIM: 605200) PREDICTED: probable E3 (1050) 305 75.4 8.3e-13 NP_001041659 (OMIM: 179710) regulator of chromosom ( 452) 300 74.0 9.4e-13 NP_001260 (OMIM: 179710) regulator of chromosome c ( 421) 295 72.9 1.9e-12 NP_001041664 (OMIM: 179710) regulator of chromosom ( 421) 295 72.9 1.9e-12 NP_001041660 (OMIM: 179710) regulator of chromosom ( 438) 295 72.9 1.9e-12 >>NP_036271 (OMIM: 606051) secretion-regulating guanine (458 aa) initn: 3218 init1: 3218 opt: 3218 Z-score: 3760.1 bits: 705.0 E(85289): 1.1e-202 Smith-Waterman score: 3218; 100.0% identity (100.0% similar) in 458 aa overlap (1-458:1-458) 10 20 30 40 50 60 pF1KE4 MEREPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 MEREPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 SAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 SAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 QVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 QVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 HGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 HGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGVCYSWGWNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGVCYSWGWNE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 HGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQLPAHPALVQDPKVTYLSPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 HGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALCQLPAHPALVQDPKVTYLSPD 370 380 390 400 410 420 430 440 450 pF1KE4 AIEDTESQKAMDKERNWKERQSETSTQSQSDWSRNGGL :::::::::::::::::::::::::::::::::::::: NP_036 AIEDTESQKAMDKERNWKERQSETSTQSQSDWSRNGGL 430 440 450 >>NP_001273760 (OMIM: 603524) RCC1 and BTB domain-contai (527 aa) initn: 330 init1: 285 opt: 354 Z-score: 412.2 bits: 85.7 E(85289): 3.2e-16 Smith-Waterman score: 354; 35.9% identity (62.5% similar) in 184 aa overlap (17-196:149-320) 10 20 30 40 pF1KE4 MEREPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFC .:::: :. ::.: : . .:.... NP_001 CHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 120 130 140 150 160 170 50 60 70 80 90 100 pF1KE4 KPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCK--SLFGCPIQ . . : :. : .:.: :...: : : .::::::.. . : :::. .: : .: NP_001 QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQP--TPCRVAALQGIRVQ 180 190 200 210 220 230 110 120 130 140 150 160 pF1KE4 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAA-GLR .::::. :..::..::: . :.::.::::. . . : . ..:.... ::: NP_001 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY-PTPVTVEKDRIIEIAACHST 240 250 260 270 280 290 170 180 190 200 210 220 pF1KE4 HAVAA-TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSD :. :: : .: :..:: : ::.. : NP_001 HTSAAKTQGGHVYMWGQ---------CRGQSVILPHLTHFSCTDDVFACFATPAVTWRLL 300 310 320 330 340 230 240 250 260 270 280 pF1KE4 HSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE NP_001 SVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDNEDDI 350 360 370 380 390 400 >>XP_005266301 (OMIM: 603524) PREDICTED: RCC1 and BTB do (527 aa) initn: 330 init1: 285 opt: 354 Z-score: 412.2 bits: 85.7 E(85289): 3.2e-16 Smith-Waterman score: 354; 35.9% identity (62.5% similar) in 184 aa overlap (17-196:149-320) 10 20 30 40 pF1KE4 MEREPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFC .:::: :. ::.: : . .:.... XP_005 CHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 120 130 140 150 160 170 50 60 70 80 90 100 pF1KE4 KPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCK--SLFGCPIQ . . : :. : .:.: :...: : : .::::::.. . : :::. .: : .: XP_005 QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQP--TPCRVAALQGIRVQ 180 190 200 210 220 230 110 120 130 140 150 160 pF1KE4 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAA-GLR .::::. :..::..::: . :.::.::::. . . : . ..:.... ::: XP_005 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY-PTPVTVEKDRIIEIAACHST 240 250 260 270 280 290 170 180 190 200 210 220 pF1KE4 HAVAA-TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSD :. :: : .: :..:: : ::.. : XP_005 HTSAAKTQGGHVYMWGQ---------CRGQSVILPHLTHFSCTDDVFACFATPAVTWRLL 300 310 320 330 340 230 240 250 260 270 280 pF1KE4 HSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE XP_005 SVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDNEDDI 350 360 370 380 390 400 >>XP_006719822 (OMIM: 603524) PREDICTED: RCC1 and BTB do (551 aa) initn: 330 init1: 285 opt: 354 Z-score: 411.9 bits: 85.7 E(85289): 3.3e-16 Smith-Waterman score: 354; 35.9% identity (62.5% similar) in 184 aa overlap (17-196:173-344) 10 20 30 40 pF1KE4 MEREPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFC .:::: :. ::.: : . .:.... XP_006 CHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 150 160 170 180 190 200 50 60 70 80 90 100 pF1KE4 KPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCK--SLFGCPIQ . . : :. : .:.: :...: : : .::::::.. . : :::. .: : .: XP_006 QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQP--TPCRVAALQGIRVQ 210 220 230 240 250 260 110 120 130 140 150 160 pF1KE4 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAA-GLR .::::. :..::..::: . :.::.::::. . . : . ..:.... ::: XP_006 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY-PTPVTVEKDRIIEIAACHST 270 280 290 300 310 170 180 190 200 210 220 pF1KE4 HAVAA-TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSD :. :: : .: :..:: : ::.. : XP_006 HTSAAKTQGGHVYMWGQ---------CRGQSVILPHLTHFSCTDDVFACFATPAVTWRLL 320 330 340 350 360 370 230 240 250 260 270 280 pF1KE4 HSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE XP_006 SVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDNEDDI 380 390 400 410 420 430 >>XP_005266299 (OMIM: 603524) PREDICTED: RCC1 and BTB do (551 aa) initn: 330 init1: 285 opt: 354 Z-score: 411.9 bits: 85.7 E(85289): 3.3e-16 Smith-Waterman score: 354; 35.9% identity (62.5% similar) in 184 aa overlap (17-196:173-344) 10 20 30 40 pF1KE4 MEREPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFC .:::: :. ::.: : . .:.... XP_005 CHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 150 160 170 180 190 200 50 60 70 80 90 100 pF1KE4 KPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCK--SLFGCPIQ . . : :. : .:.: :...: : : .::::::.. . : :::. .: : .: XP_005 QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQP--TPCRVAALQGIRVQ 210 220 230 240 250 260 110 120 130 140 150 160 pF1KE4 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAA-GLR .::::. :..::..::: . :.::.::::. . . : . ..:.... ::: XP_005 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY-PTPVTVEKDRIIEIAACHST 270 280 290 300 310 170 180 190 200 210 220 pF1KE4 HAVAA-TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSD :. :: : .: :..:: : ::.. : XP_005 HTSAAKTQGGHVYMWGQ---------CRGQSVILPHLTHFSCTDDVFACFATPAVTWRLL 320 330 340 350 360 370 230 240 250 260 270 280 pF1KE4 HSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE XP_005 SVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDNEDDI 380 390 400 410 420 430 >>NP_001259 (OMIM: 603524) RCC1 and BTB domain-containin (551 aa) initn: 330 init1: 285 opt: 354 Z-score: 411.9 bits: 85.7 E(85289): 3.3e-16 Smith-Waterman score: 354; 35.9% identity (62.5% similar) in 184 aa overlap (17-196:173-344) 10 20 30 40 pF1KE4 MEREPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFC .:::: :. ::.: : . .:.... NP_001 CHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 150 160 170 180 190 200 50 60 70 80 90 100 pF1KE4 KPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCK--SLFGCPIQ . . : :. : .:.: :...: : : .::::::.. . : :::. .: : .: NP_001 QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQP--TPCRVAALQGIRVQ 210 220 230 240 250 260 110 120 130 140 150 160 pF1KE4 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAA-GLR .::::. :..::..::: . :.::.::::. . . : . ..:.... ::: NP_001 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY-PTPVTVEKDRIIEIAACHST 270 280 290 300 310 170 180 190 200 210 220 pF1KE4 HAVAA-TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSD :. :: : .: :..:: : ::.. : NP_001 HTSAAKTQGGHVYMWGQ---------CRGQSVILPHLTHFSCTDDVFACFATPAVTWRLL 320 330 340 350 360 370 230 240 250 260 270 280 pF1KE4 HSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE NP_001 SVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDNEDDI 380 390 400 410 420 430 >>XP_016875862 (OMIM: 603524) PREDICTED: RCC1 and BTB do (555 aa) initn: 330 init1: 285 opt: 354 Z-score: 411.9 bits: 85.8 E(85289): 3.3e-16 Smith-Waterman score: 354; 35.9% identity (62.5% similar) in 184 aa overlap (17-196:177-348) 10 20 30 40 pF1KE4 MEREPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFC .:::: :. ::.: : . .:.... XP_016 CHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 150 160 170 180 190 200 50 60 70 80 90 100 pF1KE4 KPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCK--SLFGCPIQ . . : :. : .:.: :...: : : .::::::.. . : :::. .: : .: XP_016 QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQP--TPCRVAALQGIRVQ 210 220 230 240 250 260 110 120 130 140 150 160 pF1KE4 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAA-GLR .::::. :..::..::: . :.::.::::. . . : . ..:.... ::: XP_016 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY-PTPVTVEKDRIIEIAACHST 270 280 290 300 310 320 170 180 190 200 210 220 pF1KE4 HAVAA-TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSD :. :: : .: :..:: : ::.. : XP_016 HTSAAKTQGGHVYMWGQ---------CRGQSVILPHLTHFSCTDDVFACFATPAVTWRLL 330 340 350 360 370 230 240 250 260 270 280 pF1KE4 HSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE XP_016 SVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDNEDDI 380 390 400 410 420 430 >>XP_016875861 (OMIM: 603524) PREDICTED: RCC1 and BTB do (556 aa) initn: 330 init1: 285 opt: 354 Z-score: 411.9 bits: 85.8 E(85289): 3.3e-16 Smith-Waterman score: 354; 35.9% identity (62.5% similar) in 184 aa overlap (17-196:178-349) 10 20 30 40 pF1KE4 MEREPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFC .:::: :. ::.: : . .:.... XP_016 CHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 150 160 170 180 190 200 50 60 70 80 90 100 pF1KE4 KPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCK--SLFGCPIQ . . : :. : .:.: :...: : : .::::::.. . : :::. .: : .: XP_016 QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQP--TPCRVAALQGIRVQ 210 220 230 240 250 260 110 120 130 140 150 160 pF1KE4 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAA-GLR .::::. :..::..::: . :.::.::::. . . : . ..:.... ::: XP_016 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY-PTPVTVEKDRIIEIAACHST 270 280 290 300 310 320 170 180 190 200 210 220 pF1KE4 HAVAA-TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSD :. :: : .: :..:: : ::.. : XP_016 HTSAAKTQGGHVYMWGQ---------CRGQSVILPHLTHFSCTDDVFACFATPAVTWRLL 330 340 350 360 370 230 240 250 260 270 280 pF1KE4 HSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE XP_016 SVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDNEDDI 380 390 400 410 420 430 >>XP_016875860 (OMIM: 603524) PREDICTED: RCC1 and BTB do (556 aa) initn: 330 init1: 285 opt: 354 Z-score: 411.9 bits: 85.8 E(85289): 3.3e-16 Smith-Waterman score: 354; 35.9% identity (62.5% similar) in 184 aa overlap (17-196:178-349) 10 20 30 40 pF1KE4 MEREPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFC .:::: :. ::.: : . .:.... XP_016 CHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 150 160 170 180 190 200 50 60 70 80 90 100 pF1KE4 KPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCK--SLFGCPIQ . . : :. : .:.: :...: : : .::::::.. . : :::. .: : .: XP_016 QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQP--TPCRVAALQGIRVQ 210 220 230 240 250 260 110 120 130 140 150 160 pF1KE4 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAA-GLR .::::. :..::..::: . :.::.::::. . . : . ..:.... ::: XP_016 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY-PTPVTVEKDRIIEIAACHST 270 280 290 300 310 320 170 180 190 200 210 220 pF1KE4 HAVAA-TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSD :. :: : .: :..:: : ::.. : XP_016 HTSAAKTQGGHVYMWGQ---------CRGQSVILPHLTHFSCTDDVFACFATPAVTWRLL 330 340 350 360 370 230 240 250 260 270 280 pF1KE4 HSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE XP_016 SVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDNEDDI 380 390 400 410 420 430 >>XP_011533196 (OMIM: 603524) PREDICTED: RCC1 and BTB do (556 aa) initn: 330 init1: 285 opt: 354 Z-score: 411.9 bits: 85.8 E(85289): 3.3e-16 Smith-Waterman score: 354; 35.9% identity (62.5% similar) in 184 aa overlap (17-196:178-349) 10 20 30 40 pF1KE4 MEREPSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFC .:::: :. ::.: : . .:.... XP_011 CHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCL 150 160 170 180 190 200 50 60 70 80 90 100 pF1KE4 KPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCK--SLFGCPIQ . . : :. : .:.: :...: : : .::::::.. . : :::. .: : .: XP_011 QNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQP--TPCRVAALQGIRVQ 210 220 230 240 250 260 110 120 130 140 150 160 pF1KE4 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKEKVVCIAA-GLR .::::. :..::..::: . :.::.::::. . . : . ..:.... ::: XP_011 RVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY-PTPVTVEKDRIIEIAACHST 270 280 290 300 310 320 170 180 190 200 210 220 pF1KE4 HAVAA-TASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSD :. :: : .: :..:: : ::.. : XP_011 HTSAAKTQGGHVYMWGQ---------CRGQSVILPHLTHFSCTDDVFACFATPAVTWRLL 330 340 350 360 370 230 240 250 260 270 280 pF1KE4 HSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTE XP_011 SVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDNEDDI 380 390 400 410 420 430 458 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 03:30:31 2016 done: Sun Nov 6 03:30:33 2016 Total Scan time: 9.020 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]