FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5158, 148 aa 1>>>pF1KE5158 148 - 148 aa - 148 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8209+/-0.000629; mu= 14.4205+/- 0.038 mean_var=59.6100+/-11.780, 0's: 0 Z-trim(110.4): 14 B-trim: 0 in 0/50 Lambda= 0.166117 statistics sampled from 11548 (11555) to 11548 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.74), E-opt: 0.2 (0.355), width: 16 Scan time: 1.560 The best scores are: opt bits E(32554) CCDS7790.1 RPL27A gene_id:6157|Hs108|chr11 ( 148) 1019 251.7 1.2e-67 >>CCDS7790.1 RPL27A gene_id:6157|Hs108|chr11 (148 aa) initn: 1019 init1: 1019 opt: 1019 Z-score: 1328.0 bits: 251.7 E(32554): 1.2e-67 Smith-Waterman score: 1019; 100.0% identity (100.0% similar) in 148 aa overlap (1-148:1-148) 10 20 30 40 50 60 pF1KE5 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 70 80 90 100 110 120 130 140 pF1KE5 PVIVKAKFFSRRAEEKIKSVGGACVLVA :::::::::::::::::::::::::::: CCDS77 PVIVKAKFFSRRAEEKIKSVGGACVLVA 130 140 148 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:08:56 2016 done: Mon Nov 7 22:08:56 2016 Total Scan time: 1.560 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]