Result of FASTA (omim) for
pFN21AE2513
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2513, 258 aa
1>>>pF1KE2513 258 - 258 aa - 258 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.8975+/-0.000437; mu= -8.8593+/- 0.027
mean_var=406.0737+/-83.275, 0's: 0 Z-trim(121.3): 59 B-trim: 579 in 1/56
Lambda= 0.063646
statistics sampled from 37749 (37809) to 37749 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.737), E-opt: 0.2 (0.443), width: 16
Scan time: 5.430
The best scores are: opt bits E(85289)
NP_006748 (OMIM: 600692,601680) troponin T, fast s ( 258) 1651 164.9 1.3e-40
XP_016873697 (OMIM: 600692,601680) PREDICTED: trop ( 262) 1633 163.2 4.2e-40
XP_016873696 (OMIM: 600692,601680) PREDICTED: trop ( 265) 1627 162.7 6.2e-40
XP_016873705 (OMIM: 600692,601680) PREDICTED: trop ( 263) 1594 159.7 5e-39
XP_016873706 (OMIM: 600692,601680) PREDICTED: trop ( 256) 1593 159.6 5.2e-39
XP_016873707 (OMIM: 600692,601680) PREDICTED: trop ( 252) 1590 159.3 6.3e-39
XP_016873698 (OMIM: 600692,601680) PREDICTED: trop ( 257) 1578 158.2 1.4e-38
XP_006718359 (OMIM: 600692,601680) PREDICTED: trop ( 257) 1578 158.2 1.4e-38
XP_006718356 (OMIM: 600692,601680) PREDICTED: trop ( 261) 1577 158.1 1.5e-38
NP_001284575 (OMIM: 600692,601680) troponin T, fas ( 250) 1576 158.0 1.5e-38
NP_001036247 (OMIM: 600692,601680) troponin T, fas ( 250) 1576 158.0 1.5e-38
XP_016873699 (OMIM: 600692,601680) PREDICTED: trop ( 254) 1568 157.3 2.6e-38
NP_001036246 (OMIM: 600692,601680) troponin T, fas ( 256) 1566 157.1 2.9e-38
XP_016873700 (OMIM: 600692,601680) PREDICTED: trop ( 252) 1562 156.7 3.7e-38
XP_016873695 (OMIM: 600692,601680) PREDICTED: trop ( 269) 1558 156.4 5e-38
XP_006718353 (OMIM: 600692,601680) PREDICTED: trop ( 269) 1558 156.4 5e-38
XP_011518645 (OMIM: 600692,601680) PREDICTED: trop ( 269) 1558 156.4 5e-38
XP_016873701 (OMIM: 600692,601680) PREDICTED: trop ( 251) 1527 153.5 3.5e-37
XP_006718357 (OMIM: 600692,601680) PREDICTED: trop ( 261) 1516 152.5 7.1e-37
NP_001036245 (OMIM: 600692,601680) troponin T, fas ( 250) 1515 152.4 7.4e-37
XP_016873694 (OMIM: 600692,601680) PREDICTED: trop ( 256) 1505 151.5 1.4e-36
XP_016873702 (OMIM: 600692,601680) PREDICTED: trop ( 246) 1495 150.5 2.6e-36
XP_006718351 (OMIM: 600692,601680) PREDICTED: trop ( 274) 1485 149.7 5.3e-36
XP_006718362 (OMIM: 600692,601680) PREDICTED: trop ( 249) 1482 149.4 6e-36
XP_006718363 (OMIM: 600692,601680) PREDICTED: trop ( 245) 1475 148.7 9.3e-36
XP_016873704 (OMIM: 600692,601680) PREDICTED: trop ( 243) 1470 148.2 1.3e-35
XP_016873708 (OMIM: 600692,601680) PREDICTED: trop ( 239) 1463 147.6 2e-35
XP_006718365 (OMIM: 600692,601680) PREDICTED: trop ( 239) 1460 147.3 2.4e-35
XP_016873703 (OMIM: 600692,601680) PREDICTED: trop ( 245) 1414 143.1 4.5e-34
NP_001119604 (OMIM: 191041,605355) troponin T, slo ( 262) 1076 112.1 1e-24
XP_016882675 (OMIM: 191041,605355) PREDICTED: trop ( 262) 1076 112.1 1e-24
XP_016882676 (OMIM: 191041,605355) PREDICTED: trop ( 258) 1072 111.7 1.3e-24
XP_011525548 (OMIM: 191041,605355) PREDICTED: trop ( 258) 1072 111.7 1.3e-24
NP_001278703 (OMIM: 191041,605355) troponin T, slo ( 251) 1056 110.2 3.6e-24
NP_001119605 (OMIM: 191041,605355) troponin T, slo ( 251) 1056 110.2 3.6e-24
XP_016857706 (OMIM: 115195,191045,601494,612422) P ( 285) 997 104.9 1.7e-22
NP_001001431 (OMIM: 115195,191045,601494,612422) t ( 285) 997 104.9 1.7e-22
NP_000355 (OMIM: 115195,191045,601494,612422) trop ( 295) 997 104.9 1.7e-22
NP_001001432 (OMIM: 115195,191045,601494,612422) t ( 282) 988 104.0 3e-22
XP_016857705 (OMIM: 115195,191045,601494,612422) P ( 287) 988 104.1 3e-22
XP_011508242 (OMIM: 115195,191045,601494,612422) P ( 297) 988 104.1 3.1e-22
XP_011508243 (OMIM: 115195,191045,601494,612422) P ( 296) 985 103.8 3.7e-22
XP_011508245 (OMIM: 115195,191045,601494,612422) P ( 283) 983 103.6 4.1e-22
XP_011508244 (OMIM: 115195,191045,601494,612422) P ( 283) 983 103.6 4.1e-22
NP_001263276 (OMIM: 115195,191045,601494,612422) t ( 288) 983 103.6 4.1e-22
XP_006711571 (OMIM: 115195,191045,601494,612422) P ( 288) 983 103.6 4.1e-22
NP_001001430 (OMIM: 115195,191045,601494,612422) t ( 288) 983 103.6 4.1e-22
NP_001263274 (OMIM: 115195,191045,601494,612422) t ( 298) 983 103.6 4.2e-22
XP_011508240 (OMIM: 115195,191045,601494,612422) P ( 298) 983 103.6 4.2e-22
XP_011508246 (OMIM: 115195,191045,601494,612422) P ( 282) 980 103.3 4.9e-22
>>NP_006748 (OMIM: 600692,601680) troponin T, fast skele (258 aa)
initn: 1651 init1: 1651 opt: 1651 Z-score: 850.0 bits: 164.9 E(85289): 1.3e-40
Smith-Waterman score: 1651; 100.0% identity (100.0% similar) in 258 aa overlap (1-258:1-258)
10 20 30 40 50 60
pF1KE2 MSDEEVEQVEEQYEEEEEAQEEEEVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVDFDDIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MSDEEVEQVEEQYEEEEEAQEEEEVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVDFDDIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 KKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 KKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 LAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE2 ERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 ERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQK
190 200 210 220 230 240
250
pF1KE2 HSKKAGTPAKGKVGGRWK
::::::::::::::::::
NP_006 HSKKAGTPAKGKVGGRWK
250
>>XP_016873697 (OMIM: 600692,601680) PREDICTED: troponin (262 aa)
initn: 1564 init1: 1564 opt: 1633 Z-score: 841.0 bits: 163.2 E(85289): 4.2e-40
Smith-Waterman score: 1633; 98.5% identity (98.5% similar) in 262 aa overlap (1-258:1-262)
10 20 30 40 50
pF1KE2 MSDEEVEQVEEQYEEEEEAQEE----EEVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVDF
:::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
XP_016 MSDEEVEQVEEQYEEEEEAQEEVHEPEEVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVDF
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 DDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERE
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 RQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE2 KILAERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KILAERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRID
190 200 210 220 230 240
240 250
pF1KE2 QAQKHSKKAGTPAKGKVGGRWK
::::::::::::::::::::::
XP_016 QAQKHSKKAGTPAKGKVGGRWK
250 260
>>XP_016873696 (OMIM: 600692,601680) PREDICTED: troponin (265 aa)
initn: 1568 init1: 1568 opt: 1627 Z-score: 838.0 bits: 162.7 E(85289): 6.2e-40
Smith-Waterman score: 1627; 97.4% identity (97.4% similar) in 265 aa overlap (1-258:1-265)
10 20 30 40 50
pF1KE2 MSDEEVEQVEEQYEEEEEAQEE-------EEVQEDTAEEDAEEEKPRPKLTAPKIPEGEK
:::::::::::::::::::::: :::::::::::::::::::::::::::::::
XP_016 MSDEEVEQVEEQYEEEEEAQEEAAEVHEEEEVQEDTAEEDAEEEKPRPKLTAPKIPEGEK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 VDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 ERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTARE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTARE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE2 MKKKILAERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MKKKILAERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRS
190 200 210 220 230 240
240 250
pF1KE2 RIDQAQKHSKKAGTPAKGKVGGRWK
:::::::::::::::::::::::::
XP_016 RIDQAQKHSKKAGTPAKGKVGGRWK
250 260
>>XP_016873705 (OMIM: 600692,601680) PREDICTED: troponin (263 aa)
initn: 1550 init1: 1550 opt: 1594 Z-score: 821.6 bits: 159.7 E(85289): 5e-39
Smith-Waterman score: 1594; 95.8% identity (97.3% similar) in 263 aa overlap (1-258:1-263)
10 20 30 40 50
pF1KE2 MSDEEVEQVEEQYEEE-----EEAQEEEEVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVD
:::::::::::. .:: ::..: :::::::::::::::::::::::::::::::::
XP_016 MSDEEVEQVEEEAQEEAAEVHEEVHEPEEVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 FDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FDDIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 ERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE2 KKILAERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKILAERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRI
190 200 210 220 230 240
240 250
pF1KE2 DQAQKHSKKAGTPAKGKVGGRWK
:::::::::::::::::::::::
XP_016 DQAQKHSKKAGTPAKGKVGGRWK
250 260
>>XP_016873706 (OMIM: 600692,601680) PREDICTED: troponin (256 aa)
initn: 1540 init1: 1540 opt: 1593 Z-score: 821.3 bits: 159.6 E(85289): 5.2e-39
Smith-Waterman score: 1593; 97.3% identity (98.4% similar) in 258 aa overlap (1-258:1-256)
10 20 30 40 50 60
pF1KE2 MSDEEVEQVEEQYEEEEEAQEEEEVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVDFDDIQ
::::::::::: : .::..: ::::::::::::::::::::::::::::::::::::::
XP_016 MSDEEVEQVEE--EAQEEVHEPEEVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVDFDDIQ
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 KKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 LAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 ERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQK
180 190 200 210 220 230
250
pF1KE2 HSKKAGTPAKGKVGGRWK
::::::::::::::::::
XP_016 HSKKAGTPAKGKVGGRWK
240 250
>>XP_016873707 (OMIM: 600692,601680) PREDICTED: troponin (252 aa)
initn: 1563 init1: 1563 opt: 1590 Z-score: 819.9 bits: 159.3 E(85289): 6.3e-39
Smith-Waterman score: 1590; 97.7% identity (97.7% similar) in 258 aa overlap (1-258:1-252)
10 20 30 40 50 60
pF1KE2 MSDEEVEQVEEQYEEEEEAQEEEEVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVDFDDIQ
:::::::::: ::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSDEEVEQVE------EEAQEEEEVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVDFDDIQ
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 KKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 LAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 ERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQK
180 190 200 210 220 230
250
pF1KE2 HSKKAGTPAKGKVGGRWK
::::::::::::::::::
XP_016 HSKKAGTPAKGKVGGRWK
240 250
>>XP_016873698 (OMIM: 600692,601680) PREDICTED: troponin (257 aa)
initn: 1485 init1: 1485 opt: 1578 Z-score: 813.8 bits: 158.2 E(85289): 1.4e-38
Smith-Waterman score: 1578; 96.9% identity (97.7% similar) in 259 aa overlap (1-258:1-257)
10 20 30 40 50
pF1KE2 MSDEEVEQVEEQYEEEEEAQEEE-EVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVDFDDI
:::::::::::::::::::::: ::.:. :: :::::::::::::::::::::::::
XP_016 MSDEEVEQVEEQYEEEEEAQEEAAEVHEE--EEVQEEEKPRPKLTAPKIPEGEKVDFDDI
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 QKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 RLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKIL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 AERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQ
180 190 200 210 220 230
240 250
pF1KE2 KHSKKAGTPAKGKVGGRWK
:::::::::::::::::::
XP_016 KHSKKAGTPAKGKVGGRWK
240 250
>>XP_006718359 (OMIM: 600692,601680) PREDICTED: troponin (257 aa)
initn: 1485 init1: 1485 opt: 1578 Z-score: 813.8 bits: 158.2 E(85289): 1.4e-38
Smith-Waterman score: 1578; 96.9% identity (97.7% similar) in 259 aa overlap (1-258:1-257)
10 20 30 40 50
pF1KE2 MSDEEVEQVEEQYEEEEEAQEEE-EVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVDFDDI
:::::::::::::::::::::: ::.:. :: :::::::::::::::::::::::::
XP_006 MSDEEVEQVEEQYEEEEEAQEEAAEVHEE--EEVQEEEKPRPKLTAPKIPEGEKVDFDDI
10 20 30 40 50
60 70 80 90 100 110
pF1KE2 QKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQN
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE2 RLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKIL
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE2 AERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQ
180 190 200 210 220 230
240 250
pF1KE2 KHSKKAGTPAKGKVGGRWK
:::::::::::::::::::
XP_006 KHSKKAGTPAKGKVGGRWK
240 250
>>XP_006718356 (OMIM: 600692,601680) PREDICTED: troponin (261 aa)
initn: 1483 init1: 1483 opt: 1577 Z-score: 813.2 bits: 158.1 E(85289): 1.5e-38
Smith-Waterman score: 1577; 96.2% identity (97.3% similar) in 261 aa overlap (1-258:1-261)
10 20 30 40 50
pF1KE2 MSDEEVEQVEEQYEEEEEAQEEE-EVQEDT--AEEDAEEEKPRPKLTAPKIPEGEKVDFD
:::::::::::::::::::::: ::.:.. :: :::::::::::::::::::::::
XP_006 MSDEEVEQVEEQYEEEEEAQEEAAEVHEEVHEPEEVQEEEKPRPKLTAPKIPEGEKVDFD
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE2 DIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DIQKKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE2 QNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKK
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE2 ILAERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ILAERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQ
190 200 210 220 230 240
240 250
pF1KE2 AQKHSKKAGTPAKGKVGGRWK
:::::::::::::::::::::
XP_006 AQKHSKKAGTPAKGKVGGRWK
250 260
>>NP_001284575 (OMIM: 600692,601680) troponin T, fast sk (250 aa)
initn: 1478 init1: 1478 opt: 1576 Z-score: 813.0 bits: 158.0 E(85289): 1.5e-38
Smith-Waterman score: 1576; 96.9% identity (96.9% similar) in 258 aa overlap (1-258:1-250)
10 20 30 40 50 60
pF1KE2 MSDEEVEQVEEQYEEEEEAQEEEEVQEDTAEEDAEEEKPRPKLTAPKIPEGEKVDFDDIQ
::::::::::::::::::::::::::: :::::::::::::::::::::::::
NP_001 MSDEEVEQVEEQYEEEEEAQEEEEVQE--------EEKPRPKLTAPKIPEGEKVDFDDIQ
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 KKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKRQNKDLMELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNR
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 LAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILA
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE2 ERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERRKPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRIDQAQK
180 190 200 210 220 230
250
pF1KE2 HSKKAGTPAKGKVGGRWK
::::::::::::::::::
NP_001 HSKKAGTPAKGKVGGRWK
240 250
258 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 02:48:35 2016 done: Tue Nov 8 02:48:36 2016
Total Scan time: 5.430 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]