Result of FASTA (ccds) for
pFN21AE5065
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE5065, 590 aa
1>>>pF1KE5065 590 - 590 aa - 590 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.9795+/-0.000947; mu= -4.0969+/- 0.057
mean_var=383.3572+/-76.702, 0's: 0 Z-trim(116.9): 20 B-trim: 0 in 0/54
Lambda= 0.065505
statistics sampled from 17555 (17573) to 17555 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.817), E-opt: 0.2 (0.54), width: 16
Scan time: 4.440
The best scores are: opt bits E(32554)
CCDS7667.2 PWWP2B gene_id:170394|Hs108|chr10 ( 590) 4097 401.1 2.1e-111
CCDS44497.1 PWWP2B gene_id:170394|Hs108|chr10 ( 499) 3458 340.6 2.8e-93
CCDS47332.1 PWWP2A gene_id:114825|Hs108|chr5 ( 755) 693 79.5 1.7e-14
>>CCDS7667.2 PWWP2B gene_id:170394|Hs108|chr10 (590 aa)
initn: 4097 init1: 4097 opt: 4097 Z-score: 2113.6 bits: 401.1 E(32554): 2.1e-111
Smith-Waterman score: 4097; 100.0% identity (100.0% similar) in 590 aa overlap (1-590:1-590)
10 20 30 40 50 60
pF1KE5 MEPRAGCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MEPRAGCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 PVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 PVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 FEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 FEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 CKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 CKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREED
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 RAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 RAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 SRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 LRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 SACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPSVSREARQTVPPLTVRLHTQSVSEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPSVSREARQTVPPLTVRLHTQSVSEC
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 ITEDGRTVAVGDIVWGKIHGFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 ITEDGRTVAVGDIVWGKIHGFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLS
490 500 510 520 530 540
550 560 570 580 590
pF1KE5 ISKLSPFSEFFKLRFNRKKKGMYRKAITEAANAARHVAPEIRELLTQFET
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 ISKLSPFSEFFKLRFNRKKKGMYRKAITEAANAARHVAPEIRELLTQFET
550 560 570 580 590
>>CCDS44497.1 PWWP2B gene_id:170394|Hs108|chr10 (499 aa)
initn: 3458 init1: 3458 opt: 3458 Z-score: 1788.2 bits: 340.6 E(32554): 2.8e-93
Smith-Waterman score: 3458; 100.0% identity (100.0% similar) in 496 aa overlap (1-496:1-496)
10 20 30 40 50 60
pF1KE5 MEPRAGCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MEPRAGCRLPVRVEQVVNGALVVTVSCGERSFAGILLDCTKKSGLFGLPPLAPLPQVDES
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE5 PVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 PVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPETTRPEPPPPLVPPLPAGSLPPYPPY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE5 FEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 FEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRDPGRLILSTIRLRPRQVLCEK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE5 CKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 CKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKPEEPENGEPTAAATARRSKRERREED
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE5 RAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHGSLEPFRPQQAPQDDGSQDPEVLDRE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE5 SRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SRDRPSCAPSASIPKLKLTRPVPAGADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGY
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE5 LRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LRDSSPAPCADGPAGGLADLSSGSSGEDDDFKSCPQGPQGREGLAFLVSCPEGRADCASE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE5 SACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPSVSREARQTVPPLTVRLHTQSVSEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SACSSDSLDEARSSGSEGTPADTGDLSPGHGASAPSVSREARQTVPPLTVRLHTQSVSEC
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE5 ITEDGRTVAVGDIVWGKIHGFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLS
::::::::::::::::
CCDS44 ITEDGRTVAVGDIVWGHRR
490
>>CCDS47332.1 PWWP2A gene_id:114825|Hs108|chr5 (755 aa)
initn: 895 init1: 563 opt: 693 Z-score: 373.7 bits: 79.5 E(32554): 1.7e-14
Smith-Waterman score: 1167; 34.6% identity (64.5% similar) in 619 aa overlap (6-590:159-755)
10 20 30
pF1KE5 MEPRAGCRLPVRVEQVVNGALVVTVSCGERSFAGI
: .. : ...... ::::. ::. :.:.
CCDS47 EREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVTLDHIIEDALVVSFRFGEKLFSGV
130 140 150 160 170 180
40 50 60 70 80 90
pF1KE5 LLDCTKKSGLFGLPPLAPLPQVDESPVNDSHGRAPEEGDAEVMQLGSSSPPPARGVQPPE
:.: .:. : :.: .. .:. . .:. : .... .: :. : :. : .
CCDS47 LMDLSKRFGPHGIP-VTVFPKRE---YKDKPEAMPLQSNT--FQEGTEVKCEANGAVPDD
190 200 210 220 230 240
100 110 120 130 140 150
pF1KE5 TTRPEPPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRL
. : : : : . : : . ::::.: ::..::::. .:::::: ::: .:..
CCDS47 PS-PVPHPELSLAESLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKM
250 260 270 280 290 300
160 170 180 190 200 210
pF1KE5 SRNRDPGRLILSTIRLRPRQVLCEKCKSTLSPPEASPGPPAAPRARRRLGSGPDRELRKP
:. .: :...:.::::::::.:::... : . :. .:. : :
CCDS47 YRE-EPTS-IMNAIKLRPRQVLCDKCKNSVV---------AEKKEIRKGSSATDS--SKY
310 320 330 340
220 230 240 250 260 270
pF1KE5 EEPENGEPTAAATARRSKRERREEDRAPAEQVPRSPVIKISYSTPQGKGEVVKIPSRVHG
:. . . ..... .. : ... . . :. :. :.:.: . ...:.:::. ....
CCDS47 EDKKRRNESVTTVNKKLKTDHKVDGKNQNESQKRNAVVKVS-NIAHSRGRVVKVSAQANT
350 360 370 380 390 400
280 290 300 310 320
pF1KE5 SLEPFRPQQAPQD---DGSQDPEVLD--RESRDRPSCAPSASI---PKLKLTRPV--PAG
: . ... :. : .. ::: .:. .. . :.: :...:: :..
CCDS47 SKAQLSTKKVLQSKNMDHAKAREVLKIAKEKAQKKQNETSTSKNAHSKVHFTRRYQNPSS
410 420 430 440 450 460
330 340 350 360 370 380
pF1KE5 ADLPPPKIRLKPHRLGDSEHEPVYRAELVGELNGYLRDSSPAPCADGPAGGLA--DLSSG
..::: ..::::.: . :.. .. : .: . . . :.. ..: : . .:
CCDS47 GSLPP-RVRLKPQRYRNEENDSSLKTGLEKMRSGKMAPKPQSRCTSTRSAGEAPSENQSP
470 480 490 500 510 520
390 400 410 420
pF1KE5 SSG--------EDDDFKSCPQG---PQ--GREG----LAFLVSCPEGRADCASESACSSD
:.: .: . : :: :..: .. .. . ..: .: :.:: :
CCDS47 SKGPEEASSEVQDTNEVHVPGDQDEPQTLGKKGSKNNISVYMTLNQKKSDSSSASVCSID
530 540 550 560 570 580
430 440 450 460 470 480
pF1KE5 SLDEARSSGSEGTPADTGDLSPG--HGASAPSVS---REARQTVPPLTVRLHTQSVSECI
: :. .::.:: . ... :. :: :. :. :.: .: .. : ... ...::.:.
CCDS47 STDDLKSSNSECSSSESFDFPPGSMHAPSTSSTSSSSKEEKKLSNSLKMKVFSKNVSKCV
590 600 610 620 630 640
490 500 510 520 530 540
pF1KE5 TEDGRTVAVGDIVWGKIHGFPWWPARVLDISLGQKEDGEPSWREAKVSWFGSPTTSFLSI
: ::::. ::::::.::.::::::::.: :....:..: .::..:::::::::::..
CCDS47 TPDGRTICVGDIVWAKIYGFPWWPARILTITVSRKDNGLLVRQEARISWFGSPTTSFLAL
650 660 670 680 690 700
550 560 570 580 590
pF1KE5 SKLSPFSEFFKLRFNRKKKGMYRKAITEAANAARHVAPEIRELLTQFET
:.:::: : :. :::.:.::.:::::::::.::....::.: :::::::
CCDS47 SQLSPFLENFQSRFNKKRKGLYRKAITEAAKAAKQLTPEVRALLTQFET
710 720 730 740 750
590 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:41:50 2016 done: Tue Nov 8 04:41:51 2016
Total Scan time: 4.440 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]