FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3126, 318 aa 1>>>pF1KE3126 318 - 318 aa - 318 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.0823+/-0.000796; mu= 5.8731+/- 0.048 mean_var=196.5620+/-39.409, 0's: 0 Z-trim(116.1): 67 B-trim: 161 in 1/52 Lambda= 0.091480 statistics sampled from 16611 (16678) to 16611 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.807), E-opt: 0.2 (0.512), width: 16 Scan time: 2.770 The best scores are: opt bits E(32554) CCDS7655.2 FOXI2 gene_id:399823|Hs108|chr10 ( 318) 2203 302.2 3.4e-82 CCDS4372.1 FOXI1 gene_id:2299|Hs108|chr5 ( 378) 896 129.8 3.3e-30 CCDS77433.1 FOXI3 gene_id:344167|Hs108|chr2 ( 420) 781 114.7 1.3e-25 CCDS47337.1 FOXI1 gene_id:2299|Hs108|chr5 ( 283) 648 97.0 1.9e-20 CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 ( 465) 568 86.6 4.1e-17 CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 ( 319) 551 84.2 1.5e-16 CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 ( 553) 550 84.3 2.4e-16 CCDS13147.1 FOXA2 gene_id:3170|Hs108|chr20 ( 457) 548 84.0 2.5e-16 CCDS46585.1 FOXA2 gene_id:3170|Hs108|chr20 ( 463) 548 84.0 2.5e-16 CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 ( 478) 531 81.7 1.2e-15 CCDS10958.1 FOXC2 gene_id:2303|Hs108|chr16 ( 501) 529 81.5 1.5e-15 CCDS13192.1 FOXS1 gene_id:2307|Hs108|chr20 ( 330) 524 80.7 1.8e-15 CCDS4472.1 FOXF2 gene_id:2295|Hs108|chr6 ( 444) 516 79.7 4.6e-15 CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 ( 373) 514 79.4 4.8e-15 CCDS10959.1 FOXL1 gene_id:2300|Hs108|chr16 ( 345) 508 78.6 7.9e-15 CCDS12677.1 FOXA3 gene_id:3171|Hs108|chr19 ( 350) 504 78.1 1.2e-14 CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 ( 495) 502 77.9 1.8e-14 CCDS4471.1 FOXQ1 gene_id:94234|Hs108|chr6 ( 403) 488 76.0 5.5e-14 CCDS9636.1 FOXG1 gene_id:2290|Hs108|chr14 ( 489) 481 75.1 1.2e-13 CCDS10957.2 FOXF1 gene_id:2294|Hs108|chr16 ( 379) 477 74.5 1.4e-13 CCDS9665.1 FOXA1 gene_id:3169|Hs108|chr14 ( 472) 476 74.5 1.9e-13 CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 ( 376) 468 73.3 3.3e-13 CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 ( 416) 455 71.7 1.2e-12 CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 ( 416) 455 71.7 1.2e-12 CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 ( 417) 455 71.7 1.2e-12 CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 ( 417) 455 71.7 1.2e-12 CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 ( 408) 446 70.5 2.6e-12 CCDS32255.1 FOXB1 gene_id:27023|Hs108|chr15 ( 325) 438 69.3 4.6e-12 CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 ( 439) 438 69.4 5.7e-12 CCDS35045.1 FOXB2 gene_id:442425|Hs108|chr9 ( 432) 417 66.7 3.9e-11 >>CCDS7655.2 FOXI2 gene_id:399823|Hs108|chr10 (318 aa) initn: 2203 init1: 2203 opt: 2203 Z-score: 1589.1 bits: 302.2 E(32554): 3.4e-82 Smith-Waterman score: 2203; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318) 10 20 30 40 50 60 pF1KE3 MATYCDDLGPSSAPPGQAQATAHPPGYEPGDLGAVGGGPLLWVNAPALSPKSYASGPGPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MATYCDDLGPSSAPPGQAQATAHPPGYEPGDLGAVGGGPLLWVNAPALSPKSYASGPGPA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 PPYAAPSYGAPGPLLGAPGGLAGADLAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 PPYAAPSYGAPGPLLGAPGGLAGADLAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 RKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 NCEKMFDNGNFRRKRKRRAEASAAVRSGARSVGGAEAPALEPPSAACLDLQASPSPSAPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 NCEKMFDNGNFRRKRKRRAEASAAVRSGARSVGGAEAPALEPPSAACLDLQASPSPSAPE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 AATCFSGFASAMSALAGGLGTFPGGLAGDFSFGRRPPTVATHAPQTLNPSPGFAPGHQTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 AATCFSGFASAMSALAGGLGTFPGGLAGDFSFGRRPPTVATHAPQTLNPSPGFAPGHQTA 250 260 270 280 290 300 310 pF1KE3 AAGFRLSHLLYSREGTEV :::::::::::::::::: CCDS76 AAGFRLSHLLYSREGTEV 310 >>CCDS4372.1 FOXI1 gene_id:2299|Hs108|chr5 (378 aa) initn: 867 init1: 799 opt: 896 Z-score: 655.9 bits: 129.8 E(32554): 3.3e-30 Smith-Waterman score: 915; 54.3% identity (75.6% similar) in 254 aa overlap (17-258:39-291) 10 20 30 40 pF1KE3 MATYCDDLGPSSAPPGQAQATAHPPGYEPGDLGAVGGGPLLWVNAP :. . . :..: : .. .: :: :.: CCDS43 PSPPRCSPQFPSIGQEPPEMNLYYENFFHPQGVPSPQRPSFEGGGEYGATPNPYLWFNGP 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 ALSPKSYASGPGPAPPYAAPSYGAPGPLLGAPGGLAGADLAWLSLSGQQELLRLVRPPYS ...: : ::. : :. .::. ::: . .::.:.::.:: . .:.::..::::::: CCDS43 TMTPPPYLPGPN-ASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIPSQEELMKLVRPPYS 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE3 YSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPRD :::::::::..:: ..::::::::::: :::::..::::::::::::::::::::::::: CCDS43 YSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRD 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE3 EDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRAEASAAVRSGARSVGGAEAPALEPPSAA :::::::::::::::::::::::::::::::....:... : : . :. : .. CCDS43 EDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDVSSSTASLALEKTESSLPVDSPKTTE 190 200 210 220 230 240 230 240 250 260 270 pF1KE3 CLDLQASPSP----SAPE--------AATCFSGFASAMSALAGGLGTFPGGLAGDFSFGR :. . :: :.:: .: :...: :.:.: ..: CCDS43 PQDILDGASPGGTTSSPEKRPSPPPSGAPCLNSFLSSMTAYVSGGSPTSHPLVTPGLSPE 250 260 270 280 290 300 280 290 300 310 pF1KE3 RPPTVATHAPQTLNPSPGFAPGHQTAAAGFRLSHLLYSREGTEV CCDS43 PSDKTGQNSLTFNSFSPLTNLSNHSGGGDWANPMPTNMLSYGGSVLSQFSPHFYNSVNTS 310 320 330 340 350 360 >>CCDS77433.1 FOXI3 gene_id:344167|Hs108|chr2 (420 aa) initn: 825 init1: 726 opt: 781 Z-score: 573.3 bits: 114.7 E(32554): 1.3e-25 Smith-Waterman score: 813; 52.4% identity (68.5% similar) in 292 aa overlap (8-267:39-320) 10 20 30 pF1KE3 MATYCDDLGPSSAPPGQAQATAHPPGYEPGDLGAVGG :. .:::. :.:.: . : .::: CCDS77 FGVYSQPGLPPPAATAAAPGAPPAARAPYGLADYAAPPA---AAANPYLWLNGP--GVGG 10 20 30 40 50 60 40 50 60 70 80 pF1KE3 GPLLWVNA--------PALSPKSYASGPGPAPPYAAPSYGA-------PGPLLGA-PGGL : . : : : . :.:: :: :: ..: :.: : :.. CCDS77 PPSAAAAAAAAYLGAPPPPPPPGAAAGPFLQPPPAAGTFGCSQRPFAQPAPAAPASPAAP 70 80 90 100 110 120 90 100 110 120 130 140 pF1KE3 AG-ADLAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYK :: ..:.:::......:...::::::::::::::::::: ::::::.:::.:: .::::. CCDS77 AGPGELGWLSMASREDLMKMVRPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQ 130 140 150 160 170 180 150 160 170 180 190 200 pF1KE3 RSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRAE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: CCDS77 RSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRSE 190 200 210 220 230 240 210 220 230 240 pF1KE3 AS-----AA--------VRSGARS-VGGAEAPALEPPSAACLDLQASPSPSAPEAA-TCF :: :: . :: : ::: : : ::. :. : :: ::.. . CCDS77 ASNGSTVAAGTSKSEEGLSSGLGSGVGG--KPEEESPSTL---LRPSHSPEPPEGTKSTA 250 260 270 280 290 250 260 270 280 290 300 pF1KE3 SGFASAMSALAGGLGTFPGGLAGDFSFGRRPPTVATHAPQTLNPSPGFAPGHQTAAAGFR :. .. : . . :.:: ..:. CCDS77 SSPGGPMLTSTPCLNTFFSSLSSLSVSSSVSTQRALPGSRHLGIQGAQLPSSGVFSPTSI 300 310 320 330 340 350 >>CCDS47337.1 FOXI1 gene_id:2299|Hs108|chr5 (283 aa) initn: 630 init1: 562 opt: 648 Z-score: 480.7 bits: 97.0 E(32554): 1.9e-20 Smith-Waterman score: 648; 60.4% identity (81.2% similar) in 154 aa overlap (17-170:39-191) 10 20 30 40 pF1KE3 MATYCDDLGPSSAPPGQAQATAHPPGYEPGDLGAVGGGPLLWVNAP :. . . :..: : .. .: :: :.: CCDS47 PSPPRCSPQFPSIGQEPPEMNLYYENFFHPQGVPSPQRPSFEGGGEYGATPNPYLWFNGP 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 ALSPKSYASGPGPAPPYAAPSYGAPGPLLGAPGGLAGADLAWLSLSGQQELLRLVRPPYS ...: : ::. : :. .::. ::: . .::.:.::.:: . .:.::..::::::: CCDS47 TMTPPPYLPGPN-ASPFLPQAYGVQRPLLPSVSGLGGSDLGWLPIPSQEELMKLVRPPYS 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE3 YSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPRD :::::::::..:: ..::::::::::: :::::..::::::::::::::::::::::::: CCDS47 YSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRD 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE3 EDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRAEASAAVRSGARSVGGAEAPALEPPSAA :::: CCDS47 EDDPAYVSGGSPTSHPLVTPGLSPEPSDKTGQNSLTFNSFSPLTNLSNHSGGGDWANPMP 190 200 210 220 230 240 >>CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 (465 aa) initn: 542 init1: 505 opt: 568 Z-score: 420.8 bits: 86.6 E(32554): 4.1e-17 Smith-Waterman score: 578; 40.9% identity (60.2% similar) in 279 aa overlap (55-301:83-356) 30 40 50 60 70 80 pF1KE3 PGYEPGDLGAVGGGPLLWVNAPALSPKSYASGPGPAPPYAAPSYGAPGPLLGAPGGLAGA .: .:::: ::. :: . :. :: .:: CCDS75 RRRRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPPGPAPAAGAGA---GGGGGGGGA 60 70 80 90 100 90 100 110 120 130 140 pF1KE3 DLAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKA . . :: .. ::.::::: :::.::: ..: ..::::.: ....: ::.:... CCDS75 GGGGSAGSGAKN--PLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFP 110 120 130 140 150 160 150 160 170 180 190 pF1KE3 GWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR------- .::::::::::::::: :.::. .:::::::::::. :::::.: :.::: CCDS75 AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLL 170 180 190 200 210 220 200 210 220 230 pF1KE3 ---RAEASAAVRSGARSVGGAEAPA----LEPPSA------------AC-LDLQASP--S : : . . :: ..::: :: : ::. .: :: : CCDS75 PPNAAAAESLLLRGAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGLQLPPYAP 230 240 250 260 270 280 240 250 260 270 280 290 pF1KE3 PSAPEAATCFSGFASAMSALAGGLGTFPGGLAGDFS---FGRRPPTVATHAPQTLNPSPG ::: ::. .. :.:. . : : :.... :: :: ... : : : . CCDS75 PSALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLPASAA 290 300 310 320 330 340 300 310 pF1KE3 FAPGHQTAAAGFRLSHLLYSREGTEV : : ..: CCDS75 KAGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPPAPGSSG 350 360 370 380 390 400 >>CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 (319 aa) initn: 509 init1: 449 opt: 551 Z-score: 410.8 bits: 84.2 E(32554): 1.5e-16 Smith-Waterman score: 559; 42.4% identity (57.6% similar) in 269 aa overlap (34-291:12-266) 10 20 30 40 50 60 pF1KE3 YCDDLGPSSAPPGQAQATAHPPGYEPGDLGAVGGGPLLWVNAPALSPKSYASG--PGPAP : .: : : . ::. : : .: :: : CCDS55 MAGRSDMDPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREP 10 20 30 40 70 80 90 100 110 pF1KE3 PYAAPSYG--APGPLLGAPGGLAGADLAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAP :: . : :: : ::: : ... :. .::::: ::::::. :: CCDS55 EEAAAGRGEAAPTP---APG--PGRR--------RRRPLQRGKPPYSYIALIAMALAHAP 50 60 70 80 120 130 140 150 160 170 pF1KE3 LRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLD :.:::. ::.... : ::. : :::::::::.::::: ::::. .:::::::::: CCDS55 GRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLD 90 100 110 120 130 140 180 190 200 210 220 230 pF1KE3 PNCEKMFDNGNFRRKRKR--RAE--ASAAVRSGARSVGGAEAPALEPPSAACL--DLQAS : :::::.: :.::: ::: : ::. : . :: :. : : .:. CCDS55 PAAADMFDNGSFLRRRKRFKRAELPAHAAAAPGP-PLPFPYAPYAPAPGPALLVPPPSAG 150 160 170 180 190 200 240 250 260 270 280 290 pF1KE3 PSPSAPEAATCFSGFASAMSALAG-GLGTFPGGLAGDFSFGRRPPTVATHAPQTLNPSPG :.:: : ..... . ::: : : : : . . :: .:. .: . : CCDS55 PGPSPPARLFSVDSLVNLQPELAGLGAPEPPCCAAPDAAAAAFPPCAAAASPPLYSQVPD 210 220 230 240 250 260 300 310 pF1KE3 FAPGHQTAAAGFRLSHLLYSREGTEV CCDS55 RLVLPATRPGPGPLPAEPLLALAGPAAALGPLSPGEAYLRQPGFASGLERYL 270 280 290 300 310 >>CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 (553 aa) initn: 537 init1: 473 opt: 550 Z-score: 406.9 bits: 84.3 E(32554): 2.4e-16 Smith-Waterman score: 593; 36.0% identity (59.0% similar) in 322 aa overlap (29-316:10-320) 10 20 30 40 50 pF1KE3 MATYCDDLGPSSAPPGQAQATAHPPGYEPGDLGAV---GGGPLLWVNAPALSPKSYASGP :..::.: :: . : : . .:.. : CCDS44 MQARYSVSSPNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMP 10 20 30 40 60 70 80 90 100 110 pF1KE3 GPAPPYAAPSYGAPGPLLGAPGGLAGADLAWLSLSGQQELLRLVRPPYSYSALIAMAIQS .: :. :... :::.: :. . : . .:.::::: :::.::::. CCDS44 APMSVYSHPAHAEQ-----YPGGMAR---AYGPYTPQPQPKDMVKPPYSYIALITMAIQN 50 60 70 80 90 120 130 140 150 160 170 pF1KE3 APLRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWT :: .:.::. :::.. ::::. .: :::::::::::::.:: :::::. ::::.::: CCDS44 APDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWT 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE3 LDPNCEKMFDNGNFRRKRKRRAEASAAVRSGARS----VGGAEAPALEPPSAACLDLQAS :::. .::.::.: : :.:: . . ::.. .. . :. .:: : . ... CCDS44 LDPDSYNMFENGSFLR-RRRRFKKKDAVKDKEEKDRLHLKEPPPPGRQPPPAPPEQADGN 160 170 180 190 200 210 240 250 260 270 pF1KE3 -PSPSAP---------EAATCFSGFASAMSALAGGLGTF--------PGGLAGDFSFGRR :.:. : : .:: : : : : :. : . ....: : CCDS44 APGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAAAVPKIESPDSSSSSLSSGSS 220 230 240 250 260 270 280 290 300 310 pF1KE3 PP-TVATHAPQTLN--------PSPGFAPGHQTAAAGFRLSHLLYSREGTEV :: .. . : .:. :.:. : :.. :: ..... : .:. CCDS44 PPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQ--GFSVDNIMTSLRGSPQSAAAELSS 280 290 300 310 320 330 CCDS44 GLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGA 340 350 360 370 380 390 >>CCDS13147.1 FOXA2 gene_id:3170|Hs108|chr20 (457 aa) initn: 457 init1: 435 opt: 548 Z-score: 406.6 bits: 84.0 E(32554): 2.5e-16 Smith-Waterman score: 553; 37.0% identity (59.3% similar) in 322 aa overlap (1-308:65-374) 10 20 pF1KE3 MATYCD-DLGPSSA--PPGQAQATAHPPGY :..: ..:: : :: : : : : CCDS13 LGMNGMNTYMSMSAAAMGSGSGNMSAGSMNMSSYVGAGMSPSLAGMSPG-AGAMAGMGG- 40 50 60 70 80 90 30 40 50 60 70 80 pF1KE3 EPGDLGAVGGGPLLWVNAPALSP-KSYASGP-GPAPPYAAPSYGAPGPLLGAPGGLAGAD : :..: :: : .:.::: . :.: : ::: .... .:. : : . : CCDS13 SAGAAGVAGMGPHL---SPSLSPLGGQAAGAMGGLAPYA--NMNSMSPMYGQAGLSRARD 100 110 120 130 140 90 100 110 120 130 140 pF1KE3 LAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAG : . ..::::: .::.::::..: . ::::.:::.. ::::.... CCDS13 PKTYRRSYTH-----AKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQR 150 160 170 180 190 200 150 160 170 180 190 200 pF1KE3 WQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR-RAEASAA :::::::.::.:::: ::::. : ::::..::: :. .::.:: . :..:: . : . : CCDS13 WQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLA 210 220 230 240 250 260 210 220 230 240 250 260 pF1KE3 VRSGARSVG-GAEAPALEPPSAACLDLQASPSPSAPEAATCFSGFASAMSALA-GGLGTF .. .: ..: : .: : : : : :.:. .: .. . :: . :::: . CCDS13 LKEAAGAAGSGKKAAAGAQASQAQLGEAAGPASETPAGTESPHSSASPCQEHKRGGLGEL 270 280 290 300 310 320 270 280 290 300 310 pF1KE3 PGGLAGDFSFGRRPPTVATH---APQTLNPS--PGFAP-GHQTAAAGFRLSHLLYSREGT : :. .: . :. . . : . :.: ::. : .: . ..: CCDS13 KGTPAAALSPPEPAPSPGQQQQAAAHLLGPPHHPGLPPEAHLKPEHHYAFNHPFSINNLM 330 340 350 360 370 380 pF1KE3 EV CCDS13 SSEQQHHHSHHHHQPHKMDLKAYEQVMHYPGYGSPMPGSLAMGPVTNKTGLDASPLAADT 390 400 410 420 430 440 >>CCDS46585.1 FOXA2 gene_id:3170|Hs108|chr20 (463 aa) initn: 457 init1: 435 opt: 548 Z-score: 406.5 bits: 84.0 E(32554): 2.5e-16 Smith-Waterman score: 553; 37.0% identity (59.3% similar) in 322 aa overlap (1-308:71-380) 10 20 pF1KE3 MATYCD-DLGPSSA--PPGQAQATAHPPGY :..: ..:: : :: : : : : CCDS46 LGMNGMNTYMSMSAAAMGSGSGNMSAGSMNMSSYVGAGMSPSLAGMSPG-AGAMAGMGG- 50 60 70 80 90 30 40 50 60 70 80 pF1KE3 EPGDLGAVGGGPLLWVNAPALSP-KSYASGP-GPAPPYAAPSYGAPGPLLGAPGGLAGAD : :..: :: : .:.::: . :.: : ::: .... .:. : : . : CCDS46 SAGAAGVAGMGPHL---SPSLSPLGGQAAGAMGGLAPYA--NMNSMSPMYGQAGLSRARD 100 110 120 130 140 150 90 100 110 120 130 140 pF1KE3 LAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAG : . ..::::: .::.::::..: . ::::.:::.. ::::.... CCDS46 PKTYRRSYTH-----AKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQR 160 170 180 190 200 150 160 170 180 190 200 pF1KE3 WQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR-RAEASAA :::::::.::.:::: ::::. : ::::..::: :. .::.:: . :..:: . : . : CCDS46 WQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLA 210 220 230 240 250 260 210 220 230 240 250 260 pF1KE3 VRSGARSVG-GAEAPALEPPSAACLDLQASPSPSAPEAATCFSGFASAMSALA-GGLGTF .. .: ..: : .: : : : : :.:. .: .. . :: . :::: . CCDS46 LKEAAGAAGSGKKAAAGAQASQAQLGEAAGPASETPAGTESPHSSASPCQEHKRGGLGEL 270 280 290 300 310 320 270 280 290 300 310 pF1KE3 PGGLAGDFSFGRRPPTVATH---APQTLNPS--PGFAP-GHQTAAAGFRLSHLLYSREGT : :. .: . :. . . : . :.: ::. : .: . ..: CCDS46 KGTPAAALSPPEPAPSPGQQQQAAAHLLGPPHHPGLPPEAHLKPEHHYAFNHPFSINNLM 330 340 350 360 370 380 pF1KE3 EV CCDS46 SSEQQHHHSHHHHQPHKMDLKAYEQVMHYPGYGSPMPGSLAMGPVTNKTGLDASPLAADT 390 400 410 420 430 440 >>CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 (478 aa) initn: 505 init1: 465 opt: 531 Z-score: 394.2 bits: 81.7 E(32554): 1.2e-15 Smith-Waterman score: 555; 37.6% identity (59.5% similar) in 311 aa overlap (6-306:59-337) 10 20 30 pF1KE3 MATYCDDLGPSSAPPGQAQATAHPPGYEPGDLGAV :.. :.. :: : . : : . ... CCDS62 GEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPAAPHHGQPQPPHQQPLTLPKEAAGA 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE3 GGGPLLWVNAPALSPKSYASGPGPAPPYAAPSYGAPGPLLGAPGGLAGADLAWLSLSGQQ :.:: :.:: .. . : . .. : :.:: :. :::: . . CCDS62 GAGPGGDVGAP----EADGCKGGVGGEEGGASGGGPGAGSGSAGGLAPS----------K 90 100 110 120 130 100 110 120 130 140 150 pF1KE3 ELLRLVRPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLS ::.::::: :::.::: ..: .::::: : ..... ::.:... .:::::::::: CCDS62 PKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLS 140 150 160 170 180 190 160 170 180 190 200 pF1KE3 LNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR---------RAEASAAVR ::::: :.::. .:::::::::::. : :::::.: :.::: : ... .. CCDS62 LNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQ 200 210 220 230 240 250 210 220 230 240 250 260 pF1KE3 S-GARSVGGAEAPALEPPSAACLDLQASPSPSAPEAATCFSGFASAMSALAGGLGTFPGG : :: :...: . : : . :. :.: :: .: :.: .: :.. .: . CCDS62 SFGAYSLAAAAGAA--GPYGRPYGLH----PAA--AAGAYSHPAAAAAAAAAAALQYPYA 260 270 280 290 300 270 280 290 300 310 pF1KE3 LAGDFSFGRRPPTVATHAPQTLNPSPGFAPGHQTAAAGFRLSHLLYSREGTEV : :: :: : .. :. :...:: : .: CCDS62 L---------PP-VAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAG 310 320 330 340 350 CCDS62 TAGAAGTTASLIKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSF 360 370 380 390 400 410 318 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:31:17 2016 done: Tue Nov 8 04:31:17 2016 Total Scan time: 2.770 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]