FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3137, 348 aa 1>>>pF1KE3137 348 - 348 aa - 348 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5090+/-0.000745; mu= 15.4418+/- 0.045 mean_var=68.9677+/-13.770, 0's: 0 Z-trim(108.9): 16 B-trim: 0 in 0/50 Lambda= 0.154437 statistics sampled from 10540 (10545) to 10540 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.324), width: 16 Scan time: 2.650 The best scores are: opt bits E(32554) CCDS7633.1 PSTK gene_id:118672|Hs108|chr10 ( 348) 2364 535.4 2.6e-152 >>CCDS7633.1 PSTK gene_id:118672|Hs108|chr10 (348 aa) initn: 2364 init1: 2364 opt: 2364 Z-score: 2848.0 bits: 535.4 E(32554): 2.6e-152 Smith-Waterman score: 2364; 99.7% identity (99.7% similar) in 348 aa overlap (1-348:1-348) 10 20 30 40 50 60 pF1KE3 MKTAENIRGTGSDGPRKRGLCVLCGLPAAGKSTFARALAHRLQQEQGWAIGVVAYDDVMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MKTAENIRGTGSDGPRKRGLCVLCGLPAAGKSTFARALAHRLQQEQGWAIGVVAYDDVMP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 DAFLAGARARPAPSQWKLLRQELLKYLEYFLMAVINGCQMSVPPNRTEAMWEDFITCLKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 DAFLAGARARPAPSQWKLLRQELLKYLEYFLMAVINGCQMSVPPNRTEAMWEDFITCLKD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 QDLIFSAAFEAQSCYLLTKTAVSRPLFLVLDDNFYYQSMRYEVYQLARKYSLGFCQLFLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 QDLIFSAAFEAQSCYLLTKTAVSRPLFLVLDDNFYYQSMRYEVYQLARKYSLGFCQLFLD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 CPLETCLQRNGQRPQALPPETIHLMRRKLEKPNPEKNAWEHNSLTIPSPACASEASLEVT ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: CCDS76 CPLETCLQRNGQRPQALPPETIHLMGRKLEKPNPEKNAWEHNSLTIPSPACASEASLEVT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 DLLLTALENPVKYAEDNMEQKDTDRIICSTNILHKTDQTLRRIVSQTMKEAKGNQEAFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 DLLLTALENPVKYAEDNMEQKDTDRIICSTNILHKTDQTLRRIVSQTMKEAKGNQEAFSE 250 260 270 280 290 300 310 320 330 340 pF1KE3 MTFKQRWVRANHAAIWRIILGNEHIKCRSAKVGWLQCCRIEKRPLSTG :::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MTFKQRWVRANHAAIWRIILGNEHIKCRSAKVGWLQCCRIEKRPLSTG 310 320 330 340 348 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:20:01 2016 done: Sun Nov 6 15:20:02 2016 Total Scan time: 2.650 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]