(Linear) (Six-base) MAPSORT of: KIEE2011.seq Check: 6662 from: 1 to: 1770 KIEE2011.orf With 182 enzymes: SgfI * July 15, 2010 18:52 .. AccI GT'mk_AC Cuts at: 0 923 1770 Size: 923 847 Acc65I G'GTAC_C Cuts at: 0 1591 1770 Size: 1591 179 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 121 832 1326 1770 Size: 121 711 494 444 Fragments arranged by size: 711 494 444 121 AfeI AGC'GCT Cuts at: 0 646 1363 1770 Size: 646 717 407 Fragments arranged by size: 717 646 407 AflIII A'CryG_T Cuts at: 0 1574 1770 Size: 1574 196 AgeI A'CCGG_T Cuts at: 0 537 1770 Size: 537 1233 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 1282 1770 Size: 1282 488 AlwNI CAG_nnn'CTG Cuts at: 0 249 1293 1770 Size: 249 1044 477 Fragments arranged by size: 1044 477 249 ApaLI G'TGCA_C Cuts at: 0 434 1770 Size: 434 1336 AvaI C'yCGr_G Cuts at: 0 712 1009 1770 Size: 712 297 761 Fragments arranged by size: 761 712 297 BanI G'GyrC_C Cuts at: 0 1591 1770 Size: 1591 179 BanII G_rGCy'C Cuts at: 0 1096 1516 1770 Size: 1096 420 254 Fragments arranged by size: 1096 420 254 BbsI GAAGACnn'nnnn_ Cuts at: 0 134 905 1770 Size: 134 771 865 Fragments arranged by size: 865 771 134 BglI GCCn_nnn'nGGC Cuts at: 0 1037 1770 Size: 1037 733 BglII A'GATC_T Cuts at: 0 930 1605 1770 Size: 930 675 165 Fragments arranged by size: 930 675 165 Bme1580I G_kGCm'C Cuts at: 0 438 1042 1770 Size: 438 604 728 Fragments arranged by size: 728 604 438 BmgBI CAC'GTC Cuts at: 0 1428 1770 Size: 1428 342 BmrI ACTGGGnnnn_n' Cuts at: 0 301 1113 1770 Size: 301 812 657 Fragments arranged by size: 812 657 301 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1239 1464 1770 Size: 1239 225 306 Fragments arranged by size: 1239 306 225 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 250 263 496 1043 1225 1636 1770 Size: 250 13 233 547 182 411 134 Fragments arranged by size: 547 411 250 233 182 134 13 Bpu10I CC'TnA_GC Cuts at: 0 1090 1770 Size: 1090 680 BsaI GGTCTCn'nnnn_ Cuts at: 0 381 754 1010 1770 Size: 381 373 256 760 Fragments arranged by size: 760 381 373 256 BsaHI Gr'CG_yC Cuts at: 0 1463 1770 Size: 1463 307 BsaWI w'CCGG_w Cuts at: 0 537 1626 1759 1770 Size: 537 1089 133 11 Fragments arranged by size: 1089 537 133 11 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 361 391 1204 1219 1234 1249 1264 1480 Size: 361 30 813 15 15 15 15 216 Cuts at: 1480 1510 1770 Size: 30 260 Fragments arranged by size: 813 361 260 216 30 30 15 15 15 15 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 403 865 868 1198 1228 1255 1321 1770 Size: 403 462 3 330 30 27 66 449 Fragments arranged by size: 462 449 403 330 66 30 27 3 BseYI C'CCAG_C Cuts at: 0 1293 1699 1770 Size: 1293 406 71 Fragments arranged by size: 1293 406 71 BsiEI CG_ry'CG Cuts at: 0 1032 1161 1770 Size: 1032 129 609 Fragments arranged by size: 1032 609 129 BsiHKAI G_wGCw'C Cuts at: 0 438 1770 Size: 438 1332 BsmI GAATG_Cn' Cuts at: 0 1561 1770 Size: 1561 209 BsmBI CGTCTCn'nnnn_ Cuts at: 0 1201 1770 Size: 1201 569 Bsp1286I G_dGCh'C Cuts at: 0 438 1042 1096 1516 1770 Size: 438 604 54 420 254 Fragments arranged by size: 604 438 420 254 54 BspEI T'CCGG_A Cuts at: 0 1626 1770 Size: 1626 144 BspHI T'CATG_A Cuts at: 0 794 1770 Size: 794 976 BsrBI CCG'CTC Cuts at: 0 858 1770 Size: 858 912 BsrFI r'CCGG_y Cuts at: 0 537 1770 Size: 537 1233 BssSI C'ACGA_G Cuts at: 0 448 1770 Size: 448 1322 BstEII G'GTnAC_C Cuts at: 0 540 805 1770 Size: 540 265 965 Fragments arranged by size: 965 540 265 BstYI r'GATC_y Cuts at: 0 707 881 930 977 1004 1605 1770 Size: 707 174 49 47 27 601 165 Fragments arranged by size: 707 601 174 165 49 47 27 Bsu36I CC'TnA_GG Cuts at: 0 457 1770 Size: 457 1313 BtgI C'CryG_G Cuts at: 0 257 620 686 1026 1155 1508 1528 1770 Size: 257 363 66 340 129 353 20 242 Fragments arranged by size: 363 353 340 257 242 129 66 20 DrdI GACnn_nn'nnGTC Cuts at: 0 1198 1770 Size: 1198 572 EaeI y'GGCC_r Cuts at: 0 20 363 966 1029 1158 1770 Size: 20 343 603 63 129 612 Fragments arranged by size: 612 603 343 129 63 20 EagI C'GGCC_G Cuts at: 0 1029 1158 1770 Size: 1029 129 612 Fragments arranged by size: 1029 612 129 EarI CTCTTCn'nnn_ Cuts at: 0 652 1666 1770 Size: 652 1014 104 Fragments arranged by size: 1014 652 104 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 71 1770 Size: 71 1699 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 121 250 263 496 832 1043 1225 1326 Size: 121 129 13 233 336 211 182 101 Cuts at: 1326 1636 1770 Size: 310 134 Fragments arranged by size: 336 310 233 211 182 134 129 121 101 13 EcoNI CCTnn'n_nnAGG Cuts at: 0 715 1341 1770 Size: 715 626 429 Fragments arranged by size: 715 626 429 EcoO109I rG'GnC_Cy Cuts at: 0 1065 1107 1200 1770 Size: 1065 42 93 570 Fragments arranged by size: 1065 570 93 42 HaeII r_GCGC'y Cuts at: 0 648 1365 1770 Size: 648 717 405 Fragments arranged by size: 717 648 405 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 361 393 1007 1039 1129 1161 1234 1266 Size: 361 32 614 32 90 32 73 32 Cuts at: 1266 1480 1512 1770 Size: 214 32 258 Fragments arranged by size: 614 361 258 214 90 73 32 32 32 32 32 HincII GTy'rAC Cuts at: 0 723 741 1770 Size: 723 18 1029 Fragments arranged by size: 1029 723 18 KpnI G_GTAC'C Cuts at: 0 1595 1770 Size: 1595 175 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 506 1361 1770 Size: 506 855 409 Fragments arranged by size: 855 506 409 MscI TGG'CCA Cuts at: 0 22 365 968 1770 Size: 22 343 603 802 Fragments arranged by size: 802 603 343 22 MspA1I CmG'CkG Cuts at: 0 1028 1157 1770 Size: 1028 129 613 Fragments arranged by size: 1028 613 129 NcoI C'CATG_G Cuts at: 0 686 1528 1770 Size: 686 842 242 Fragments arranged by size: 842 686 242 NotI GC'GGCC_GC Cuts at: 0 1158 1770 Size: 1158 612 NspI r_CATG'y Cuts at: 0 495 1770 Size: 495 1275 PflMI CCAn_nnn'nTGG Cuts at: 0 372 1529 1770 Size: 372 1157 241 Fragments arranged by size: 1157 372 241 PfoI T'CCnGG_A Cuts at: 0 248 1202 1770 Size: 248 954 568 Fragments arranged by size: 954 568 248 PpuMI rG'GwC_Cy Cuts at: 0 1065 1200 1770 Size: 1065 135 570 Fragments arranged by size: 1065 570 135 PsrI GAACnnnnnnTACnnnnnnn_nnnnn' Cuts at: 0 907 939 1770 Size: 907 32 831 Fragments arranged by size: 907 831 32 PstI C_TGCA'G Cuts at: 0 163 1320 1770 Size: 163 1157 450 Fragments arranged by size: 1157 450 163 SacII CC_GC'GG Cuts at: 0 1029 1158 1770 Size: 1029 129 612 Fragments arranged by size: 1029 612 129 SexAI A'CCwGG_T Cuts at: 0 371 1770 Size: 371 1399 SfcI C'TryA_G Cuts at: 0 159 400 1316 1770 Size: 159 241 916 454 Fragments arranged by size: 916 454 241 159 SmlI C'TyrA_G Cuts at: 0 712 1770 Size: 712 1058 StuI AGG'CCT Cuts at: 0 222 1770 Size: 222 1548 StyI C'CwwG_G Cuts at: 0 686 764 1110 1528 1770 Size: 686 78 346 418 242 Fragments arranged by size: 686 418 346 242 78 TatI w'GTAC_w Cuts at: 0 1220 1415 1770 Size: 1220 195 355 Fragments arranged by size: 1220 355 195 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 428 460 760 792 1219 1251 1770 Size: 428 32 300 32 427 32 519 Fragments arranged by size: 519 428 427 300 32 32 32 Tth111I GACn'n_nGTC Cuts at: 0 373 1770 Size: 373 1397 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 225 1770 Size: 225 1545 XhoI C'TCGA_G Cuts at: 0 712 1770 Size: 712 1058 Enzymes that do cut: AccI Acc65I AcuI AfeI AflIII AgeI AlfI AlwNI ApaLI AvaI BanI BanII BbsI BglI BglII Bme1580I BmgBI BmrI BplI BpmI Bpu10I BsaI BsaHI BsaWI BsaXI BseRI BseYI BsiEI BsiHKAI BsmI BsmBI Bsp1286I BspEI BspHI BsrBI BsrFI BssSI BstEII BstYI Bsu36I BtgI DrdI EaeI EagI EarI EciI Eco57MI EcoNI EcoO109I HaeII Hin4I HincII KpnI MmeI MscI MspA1I NcoI NotI NspI PflMI PfoI PpuMI PsrI PstI SacII SexAI SfcI SmlI StuI StyI TatI TstI Tth111I XcmI XhoI Enzymes that do not cut: AarI AatII AclI AflII AhdI AleI AloI ApaI ApoI AscI AseI AsiSI AvrII BaeI BamHI BbeI BbvCI BcgI BciVI BclI BfrBI BlpI BmtI BpuEI BsaAI BsaBI BsgI BsiWI BspMI BsrDI BsrGI BssHII BstAPI BstBI BstXI BstZ17I BtgZI BtsI ClaI CspCI DraI DraIII EcoICRI EcoRI EcoRV FalI FseI FspI FspAI HindIII HpaI KasI MfeI MluI MslI NaeI NarI NdeI NgoMIV NheI NruI NsiI PacI PasI PciI PmeI PmlI PpiI PshAI PsiI PspOMI PspXI PvuI PvuII RsrII SacI SalI SanDI SapI SbfI ScaI SfiI SfoI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI SspI SwaI TaqII XbaI XmaI XmnI ZraI