FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6362, 337 aa 1>>>pF1KE6362 337 - 337 aa - 337 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4459+/-0.00095; mu= 14.8898+/- 0.057 mean_var=61.2899+/-12.456, 0's: 0 Z-trim(104.1): 14 B-trim: 0 in 0/51 Lambda= 0.163825 statistics sampled from 7723 (7731) to 7723 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.612), E-opt: 0.2 (0.237), width: 16 Scan time: 1.830 The best scores are: opt bits E(32554) CCDS7610.1 SFXN4 gene_id:119559|Hs108|chr10 ( 337) 2213 531.7 3.2e-151 CCDS1922.1 SFXN5 gene_id:94097|Hs108|chr2 ( 340) 414 106.5 3.2e-23 CCDS4394.1 SFXN1 gene_id:94081|Hs108|chr5 ( 322) 312 82.4 5.4e-16 CCDS7539.1 SFXN2 gene_id:118980|Hs108|chr10 ( 322) 283 75.6 6.3e-14 CCDS7508.2 SFXN3 gene_id:81855|Hs108|chr10 ( 325) 280 74.9 1e-13 >>CCDS7610.1 SFXN4 gene_id:119559|Hs108|chr10 (337 aa) initn: 2213 init1: 2213 opt: 2213 Z-score: 2828.5 bits: 531.7 E(32554): 3.2e-151 Smith-Waterman score: 2213; 100.0% identity (100.0% similar) in 337 aa overlap (1-337:1-337) 10 20 30 40 50 60 pF1KE6 MSLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTNVFISVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 MSLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTNVFISVE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SIENSRQLLCTNEDVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPFMAPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 SIENSRQLLCTNEDVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPFMAPT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VFLSMTPLKGIKSVILPQVFLCAYMAAFNSINGNRSYTCKPLERSLLMAGAVASSTFLGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 VFLSMTPLKGIKSVILPQVFLCAYMAAFNSINGNRSYTCKPLERSLLMAGAVASSTFLGV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 IPQFVQMKYGLTGPWIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDKEGNVLGHSRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 IPQFVQMKYGLTGPWIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDKEGNVLGHSRI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 AGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLWILKLSCTVLAMGLMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS76 AGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLWILKLSCTVLAMGLMV 250 260 270 280 290 300 310 320 330 pF1KE6 PFSFSIFPQIGQIQYCSLEEKIQSPTEETEIFYHRGV ::::::::::::::::::::::::::::::::::::: CCDS76 PFSFSIFPQIGQIQYCSLEEKIQSPTEETEIFYHRGV 310 320 330 >>CCDS1922.1 SFXN5 gene_id:94097|Hs108|chr2 (340 aa) initn: 399 init1: 230 opt: 414 Z-score: 530.5 bits: 106.5 E(32554): 3.2e-23 Smith-Waterman score: 414; 28.0% identity (59.8% similar) in 328 aa overlap (19-337:21-340) 10 20 30 40 50 pF1KE6 MSLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTNVFIS :: : : . :: .. :: :: .. ...:: ..:.. CCDS19 MADTATTASAAAASAASASSDA-PPFQLGKPRF---QQTSFYGRFRHFLDIIDPRTLFVT 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 VESIENSRQLLCTNEDVS-SPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPFM . .... ::: . . :. ..... : : . : .:::... : :: ....:: CCDS19 ERRLREAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFG 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 APTVFLSMTPLKGIKSVILPQVFLCAYMAAFNSINGNRSYTCKPLERSLLMAG---AVAS .: : . : . . :... : . .. : : : : . :: : .. : :: : CCDS19 TPIVVGLLLPNQTLASTVFWQWLNQSHNACVNYANRNAT---KPSPASKFIQGYLGAVIS 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 STFLGVIPQFVQMKYGLTGP----WIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDK .. ..: . . .: . : :.:..: ...:. :: . : : .:: :.:. CCDS19 AVSIAVGLNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDS 180 190 200 210 220 230 240 250 260 270 280 pF1KE6 EGNVLGHSRIAGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLW-ILKL .::..: :.::. .:. :: .:.:: ..: . ....: .. : : . .: CCDS19 DGNLVGSSKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSL 240 250 260 270 280 290 290 300 310 320 330 pF1KE6 SCTVLAMGLMVPFSFSIFPQIGQIQYCSLEEKIQSPTEETEIFYHRGV : . :.:: .:...:.:::...:. .:: .: . : . :..:. CCDS19 VC-LAAFGLALPLAISLFPQMSEIETSQLEPEIAQATSSRTVVYNKGL 300 310 320 330 340 >>CCDS4394.1 SFXN1 gene_id:94081|Hs108|chr5 (322 aa) initn: 237 init1: 160 opt: 312 Z-score: 400.6 bits: 82.4 E(32554): 5.4e-16 Smith-Waterman score: 312; 22.0% identity (58.4% similar) in 327 aa overlap (25-337:5-322) 10 20 30 40 50 pF1KE6 MSLEQEEETQPGRLLGRRDAVPAFIEPNVRF----WITERQSFIRRFLQWTELLDPTNVF . ::. . : ....:: : .. . :: :.. CCDS43 MSGELPPNINIKEPRW--DQSTFIGRANHFFTVTDPRNIL 10 20 30 60 70 80 90 100 110 pF1KE6 ISVESIENSRQLLCT-NEDVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLP .. :..:..:... . . :. ..... .: .. :::... . . : .: .: CCDS43 LTNEQLESARKIVHDYRQGIVPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVP 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE6 FMAPTVFLSMTPLKGIKSVILPQVFLCAYMAAFNSIN--GNRSYTCKPLERSLLMA--GA . . :: . .:.. : . .. :. : : :. : . : . . : :: CCDS43 MNMTITGCMMTFYRTTPAVLFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGA 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE6 VASSTFLGVIPQFVQMKYGLTGPWIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDKE ::.. :... . :. : : :..: .. :. .:. . :. : :: : :.. CCDS43 VATALGLNALTKHVS-------PLIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDEN 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE6 GNVLGHSRIAGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLWILKLSC :: ::.: :. .:. ....:::.. . . :: . ... .... : .... CCDS43 GNRLGESANAAKQAITQVVVSRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQVGL 220 230 240 250 260 270 300 310 320 330 pF1KE6 TVLAMGLMVPFSFSIFPQIGQIQYCSLEEKIQSPTEETE-----IFYHRGV . . . . .:. ..::: .... ::: ..:. .:.. .....:. CCDS43 VGFCLVFATPLCCALFPQKSSMSVTSLEAELQAKIQESHPELRRVYFNKGL 280 290 300 310 320 >>CCDS7539.1 SFXN2 gene_id:118980|Hs108|chr10 (322 aa) initn: 220 init1: 144 opt: 283 Z-score: 363.5 bits: 75.6 E(32554): 6.3e-14 Smith-Waterman score: 283; 22.9% identity (56.7% similar) in 319 aa overlap (32-337:15-322) 10 20 30 40 50 60 pF1KE6 SLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTNVFISVES : ....:. : .. .. :: .::.: . CCDS75 MEADLSGFNIDAPRW--DQRTFLGRVKHFLNITDPRTVFVSERE 10 20 30 40 70 80 90 100 110 pF1KE6 IENSRQLLCTNE-DVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPF-MAP .. .. .. .. : :.. ... : : .. :::... . . : . :: : CCDS75 LDWAKVMVEKSRMGVVPPGTQVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLPGGMII 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE6 TVFLSMTPLKGIKSVILPQVFLCAYMAAFNSINGNRSY--TCKPLERSLLMAGAVASSTF : :. . . . .::. : .. : : : : . . . . : . : ..: .: CCDS75 TGFM-LQFYRTMPAVIFWQWVNQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVATA 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE6 LGVIPQFVQMKYGLTGPWIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDKEGNVLGH .: . .... :.: :. : .. :. .:. : :. : :::: : :.. : .:: CCDS75 VG-MNMLTKKAPPLVGRWV----PFAAVAAANCVNIPMMRQQELIKGICVKDRNENEIGH 170 180 190 200 210 240 250 260 270 280 290 pF1KE6 SRIAGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNP---GSLWILKLSCTVL :: :.. .. ... :::.. . . .. :. ... ....: . : .. .: .. CCDS75 SRRAAAIGITQVVISRITMSAPGMILLPVIMERLEKLHFMQKVKVLHAPLQVMLSGCFLI 220 230 240 250 260 270 300 310 320 330 pF1KE6 AMGLMVPFSFSIFPQIGQIQYCSLEEKIQSPTE------ETEIFYHRGV .::: . ..::: .. :: :.:. . : .....:. CCDS75 ---FMVPVACGLFPQKCELPVSYLEPKLQDTIKAKYGELEPYVYFNKGL 280 290 300 310 320 >>CCDS7508.2 SFXN3 gene_id:81855|Hs108|chr10 (325 aa) initn: 169 init1: 138 opt: 280 Z-score: 359.6 bits: 74.9 E(32554): 1e-13 Smith-Waterman score: 280; 21.7% identity (56.6% similar) in 318 aa overlap (32-337:19-325) 10 20 30 40 50 60 pF1KE6 SLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTNVFISVES : ....:. : .. . :: :...: . CCDS75 MESKMGELPLDINIQEPRW--DQSTFLGRARHFFTVTDPRNLLLSGAQ 10 20 30 40 70 80 90 100 110 120 pF1KE6 IENSRQLLCTNE-DVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPFMAPT .: ::... . . : .:. ..... .: .. :::... . . : .: .:. CCDS75 LEASRNIVQNYRAGVVTPGITEDQLWRAKYVYDSAFHPDTGEKVVLIGRMSAQVPMNMTI 50 60 70 80 90 100 130 140 150 160 170 pF1KE6 VFLSMTPLKGIKSVILPQVFLCAYMAAFNSIN--GNRSYTCKPLERSLLMAGAVASSTFL . .: . .:.. : .. : : : :. : . : . . : . : .: : CCDS75 TGCMLTFYRKTPTVVFWQWVNQSFNAIVNYSNRSGDTPITVRQLGTAYVSATTGAVATAL 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE6 GVIPQFVQMKYGLTGPWIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDKEGNVLGHS :. .. : . :..: .. :. .:. . :. : :: : :. :. ::.: CCDS75 GLKSLTKHLP-----PLVGRFVPFAAVAAANCINIPLMRQRELQVGIPVADEAGQRLGYS 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE6 RIAGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLWI---LKLSCTVLA :. ... ... ::: . . :: .. ... ..... : :. :... . . CCDS75 VTAAKQGIFQVVISRICMAIPAMAIPPLIMDTLEKKDFLKRRP---WLGAPLQVGLVGFC 230 240 250 260 270 300 310 320 330 pF1KE6 MGLMVPFSFSIFPQIGQIQYCSLEEKI------QSPTEETEIFYHRGV . . .:. ..::: ..:. .:: .. :.:. :. ..:..:. CCDS75 LVFATPLCCALFPQKSSIHISNLEPELRAQIHEQNPSVEV-VYYNKGL 280 290 300 310 320 337 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:28:26 2016 done: Tue Nov 8 12:28:26 2016 Total Scan time: 1.830 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]