FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3304, 795 aa 1>>>pF1KE3304 795 - 795 aa - 795 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3881+/-0.00115; mu= 14.1853+/- 0.069 mean_var=70.8136+/-14.580, 0's: 0 Z-trim(102.1): 20 B-trim: 0 in 0/50 Lambda= 0.152411 statistics sampled from 6793 (6798) to 6793 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.566), E-opt: 0.2 (0.209), width: 16 Scan time: 2.830 The best scores are: opt bits E(32554) CCDS7443.1 ALDH18A1 gene_id:5832|Hs108|chr10 ( 795) 5161 1144.7 0 CCDS31257.1 ALDH18A1 gene_id:5832|Hs108|chr10 ( 793) 5135 1139.0 0 >>CCDS7443.1 ALDH18A1 gene_id:5832|Hs108|chr10 (795 aa) initn: 5161 init1: 5161 opt: 5161 Z-score: 6127.7 bits: 1144.7 E(32554): 0 Smith-Waterman score: 5161; 100.0% identity (100.0% similar) in 795 aa overlap (1-795:1-795) 10 20 30 40 50 60 pF1KE3 MLSQVYRCGFQPFNQHLLPWVKCTTVFRSHCIQPSVIRHVRSWSNIPFITVPLSRTHGKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 MLSQVYRCGFQPFNQHLLPWVKCTTVFRSHCIQPSVIRHVRSWSNIPFITVPLSRTHGKS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 FAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSGAV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 AFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFTQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 AFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFTQY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 SICAAQILVTNLDFHDEQKRRNLNGTLHELLRMNIVPIVNTNDAVVPPAEPNSDLQGVNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 SICAAQILVTNLDFHDEQKRRNLNGTLHELLRMNIVPIVNTNDAVVPPAEPNSDLQGVNV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 ISVKDNDSLAARLAVEMKTDLLIVLSDVEGLFDSPPGSDDAKLIDIFYPGDQQSVTFGTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 ISVKDNDSLAARLAVEMKTDLLIVLSDVEGLFDSPPGSDDAKLIDIFYPGDQQSVTFGTK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 SRVGMGGMEAKVKAALWALQGGTSVVIANGTHPKVSGHVITDIVEGKKVGTFFSEVKPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 SRVGMGGMEAKVKAALWALQGGTSVVIANGTHPKVSGHVITDIVEGKKVGTFFSEVKPAG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 PTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 PTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 PLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 PLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIF 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 ESRPDCLPQVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 ESRPDCLPQVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTRE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 EVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAKGIPVMGHSEGICHMYVDSEASVDKVTRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 EVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAKGIPVMGHSEGICHMYVDSEASVDKVTRL 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 VRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 VRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSE 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 VKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 VKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVF 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 WNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKDHVVSDFSEHGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 WNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKDHVVSDFSEHGSL 730 740 750 760 770 780 790 pF1KE3 KYLHENLPIPQRNTN ::::::::::::::: CCDS74 KYLHENLPIPQRNTN 790 >>CCDS31257.1 ALDH18A1 gene_id:5832|Hs108|chr10 (793 aa) initn: 3583 init1: 3583 opt: 5135 Z-score: 6096.8 bits: 1139.0 E(32554): 0 Smith-Waterman score: 5135; 99.7% identity (99.7% similar) in 795 aa overlap (1-795:1-793) 10 20 30 40 50 60 pF1KE3 MLSQVYRCGFQPFNQHLLPWVKCTTVFRSHCIQPSVIRHVRSWSNIPFITVPLSRTHGKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MLSQVYRCGFQPFNQHLLPWVKCTTVFRSHCIQPSVIRHVRSWSNIPFITVPLSRTHGKS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 FAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSGAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 FAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSGAV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 AFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFTQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 AFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFTQY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 SICAAQILVTNLDFHDEQKRRNLNGTLHELLRMNIVPIVNTNDAVVPPAEPNSDLQGVNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SICAAQILVTNLDFHDEQKRRNLNGTLHELLRMNIVPIVNTNDAVVPPAEPNSDLQGV-- 190 200 210 220 230 250 260 270 280 290 300 pF1KE3 ISVKDNDSLAARLAVEMKTDLLIVLSDVEGLFDSPPGSDDAKLIDIFYPGDQQSVTFGTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 ISVKDNDSLAARLAVEMKTDLLIVLSDVEGLFDSPPGSDDAKLIDIFYPGDQQSVTFGTK 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE3 SRVGMGGMEAKVKAALWALQGGTSVVIANGTHPKVSGHVITDIVEGKKVGTFFSEVKPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SRVGMGGMEAKVKAALWALQGGTSVVIANGTHPKVSGHVITDIVEGKKVGTFFSEVKPAG 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE3 PTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 PTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE3 PLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 PLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIF 420 430 440 450 460 470 490 500 510 520 530 540 pF1KE3 ESRPDCLPQVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 ESRPDCLPQVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTRE 480 490 500 510 520 530 550 560 570 580 590 600 pF1KE3 EVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAKGIPVMGHSEGICHMYVDSEASVDKVTRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 EVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAKGIPVMGHSEGICHMYVDSEASVDKVTRL 540 550 560 570 580 590 610 620 630 640 650 660 pF1KE3 VRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 VRDSKCEYPAACNALETLLIHRDLLRTPLFDQIIDMLRVEQVKIHAGPKFASYLTFSPSE 600 610 620 630 640 650 670 680 690 700 710 720 pF1KE3 VKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 VKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVF 660 670 680 690 700 710 730 740 750 760 770 780 pF1KE3 WNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKDHVVSDFSEHGSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 WNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGKDHVVSDFSEHGSL 720 730 740 750 760 770 790 pF1KE3 KYLHENLPIPQRNTN ::::::::::::::: CCDS31 KYLHENLPIPQRNTN 780 790 795 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:41:32 2016 done: Sat Nov 5 23:41:33 2016 Total Scan time: 2.830 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]