FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5437, 351 aa 1>>>pF1KE5437 351 - 351 aa - 351 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0483+/-0.000831; mu= 14.1648+/- 0.051 mean_var=96.4711+/-18.891, 0's: 0 Z-trim(109.8): 10 B-trim: 0 in 0/51 Lambda= 0.130580 statistics sampled from 11170 (11174) to 11170 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.695), E-opt: 0.2 (0.343), width: 16 Scan time: 2.630 The best scores are: opt bits E(32554) CCDS7317.1 MCU gene_id:90550|Hs108|chr10 ( 351) 2329 448.7 3.4e-126 CCDS59219.1 MCU gene_id:90550|Hs108|chr10 ( 302) 1983 383.5 1.3e-106 CCDS59218.1 MCU gene_id:90550|Hs108|chr10 ( 330) 1107 218.5 6.5e-57 CCDS3683.2 MCUB gene_id:55013|Hs108|chr4 ( 336) 995 197.4 1.5e-50 >>CCDS7317.1 MCU gene_id:90550|Hs108|chr10 (351 aa) initn: 2329 init1: 2329 opt: 2329 Z-score: 2379.0 bits: 448.7 E(32554): 3.4e-126 Smith-Waterman score: 2329; 100.0% identity (100.0% similar) in 351 aa overlap (1-351:1-351) 10 20 30 40 50 60 pF1KE5 MAAAAGRSLLLLLSSRGGGGGGAGGCGALTAGCFPGLGVSRHRQQQHHRTVHQRIASWQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 MAAAAGRSLLLLLSSRGGGGGGAGGCGALTAGCFPGLGVSRHRQQQHHRTVHQRIASWQN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LGAVYCSTVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 LGAVYCSTVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 GIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 GIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 TLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 TLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 AYMATQFGILARLTWWEYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 AYMATQFGILARLTWWEYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYL 250 260 270 280 290 300 310 320 330 340 350 pF1KE5 LFFHKGAKKSRFDLEKYNQLKDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 LFFHKGAKKSRFDLEKYNQLKDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD 310 320 330 340 350 >>CCDS59219.1 MCU gene_id:90550|Hs108|chr10 (302 aa) initn: 1983 init1: 1983 opt: 1983 Z-score: 2027.7 bits: 383.5 E(32554): 1.3e-106 Smith-Waterman score: 1983; 100.0% identity (100.0% similar) in 301 aa overlap (51-351:2-302) 30 40 50 60 70 80 pF1KE5 GGAGGCGALTAGCFPGLGVSRHRQQQHHRTVHQRIASWQNLGAVYCSTVVPSDDVTVVYQ :::::::::::::::::::::::::::::: CCDS59 MVHQRIASWQNLGAVYCSTVVPSDDVTVVYQ 10 20 30 90 100 110 120 130 140 pF1KE5 NGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVRVAASTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 NGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVRVAASTG 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE5 IDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQLYTTLCIEQHQLNKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 IDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVKTLVQQLYTTLCIEQHQLNKE 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE5 RELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWWEYSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 RELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWWEYSW 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE5 DIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYLLFFHKGAKKSRFDLEKYNQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 DIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYLLFFHKGAKKSRFDLEKYNQL 220 230 240 250 260 270 330 340 350 pF1KE5 KDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD ::::::::::::::::::::::::::::::: CCDS59 KDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD 280 290 300 >>CCDS59218.1 MCU gene_id:90550|Hs108|chr10 (330 aa) initn: 1978 init1: 1107 opt: 1107 Z-score: 1135.3 bits: 218.5 E(32554): 6.5e-57 Smith-Waterman score: 1933; 86.0% identity (88.9% similar) in 351 aa overlap (1-351:1-330) 10 20 30 40 50 60 pF1KE5 MAAAAGRSLLLLLSSRGGGGGGAGGCGALTAGCFPGLGVSRHRQQQHHRTVHQRIASWQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MAAAAGRSLLLLLSSRGGGGGGAGGCGALTAGCFPGLGVSRHRQQQHHRTVHQRIASWQN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LGAVYCSTVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 LGAVYCSTVVPSDDVTVVYQNGLPVISVRLPSRRERCQFTLKPISDSVGVFLRQLQEEDR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 GIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRDLLSHENAATLNDVK ::::::::::::::::::::::::::::::::::::::::::::: .. ... : . CCDS59 GIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDLTYHVRPPKRVEMGFCHVGQ-NGFE 130 140 150 160 170 190 200 210 220 230 240 pF1KE5 TLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLAPLEKVRIEISRKAEKRTTLVLWGGL :... : : : . ::::::::::::::::::::: CCDS59 LLTSSY--------------------LPASASQSAEIIAVRIEISRKAEKRTTLVLWGGL 180 190 200 210 250 260 270 280 290 300 pF1KE5 AYMATQFGILARLTWWEYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 AYMATQFGILARLTWWEYSWDIMEPVTYFITYGSAMAMYAYFVMTRQEYVYPEARDRQYL 220 230 240 250 260 270 310 320 330 340 350 pF1KE5 LFFHKGAKKSRFDLEKYNQLKDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 LFFHKGAKKSRFDLEKYNQLKDAIAQAEMDLKRLRDPLQVHLPLRQIGEKD 280 290 300 310 320 330 >>CCDS3683.2 MCUB gene_id:55013|Hs108|chr4 (336 aa) initn: 1016 init1: 995 opt: 995 Z-score: 1021.1 bits: 197.4 E(32554): 1.5e-50 Smith-Waterman score: 995; 48.8% identity (83.9% similar) in 285 aa overlap (67-351:52-336) 40 50 60 70 80 90 pF1KE5 LGVSRHRQQQHHRTVHQRIASWQNLGAVYCSTVVPSDDVTVVYQNGLPVISVRLPSRRER ::::: :..::.:..:::.... ::::.:: CCDS36 PARPWPLPPPPQVLRVKLCGNVKYYQSHHYSTVVPPDEITVIYRHGLPLVTLTLPSRKER 30 40 50 60 70 80 100 110 120 130 140 150 pF1KE5 CQFTLKPISDSVGVFLRQLQEEDRGIDRVAIYSPDGVRVAASTGIDLLLLDDFKLVINDL :::..::. ..:: ::..::.::.:: .::.. :: ..::: .:.::..::::::: . CCDS36 CQFVVKPMLSTVGSFLQDLQNEDKGIKTAAIFTADGNMISASTLMDILLMNDFKLVINKI 90 100 110 120 130 140 160 170 180 190 200 210 pF1KE5 TYHVRPPKRDLLSHENAATLNDVKTLVQQLYTTLCIEQHQLNKERELIERLEDLKEQLAP .: :. :::. :.:..: .. .:.::..:.: : .:. : ..:..:.:... ::::: : CCDS36 AYDVQCPKREKPSNEHTAEMEHMKSLVHRLFTILHLEESQKKREHHLLEKIDHLKEQLQP 150 160 170 180 190 200 220 230 240 250 260 270 pF1KE5 LEKVRIEISRKAEKRTTLVLWGGLAYMATQFGILARLTWWEYSWDIMEPVTYFITYGSAM ::.:. : ..: .:. .::.::: .. : : :: :::: ::::::::::::::....: CCDS36 LEQVKAGIEAHSEAKTSGLLWAGLALLSIQGGALAWLTWWVYSWDIMEPVTYFITFANSM 210 220 230 240 250 260 280 290 300 310 320 330 pF1KE5 AMYAYFVMTRQEYVYPEARDRQYLLFFHKGAKKSRFDLEKYNQLKDAIAQAEMDLKRLRD ...:::..:::.:.: ...::.: :::: .:...::...::.::. .:.:. .::. : CCDS36 VFFAYFIVTRQDYTYSAVKSRQFLQFFHKKSKQQHFDVQQYNKLKEDLAKAKESLKQARH 270 280 290 300 310 320 340 350 pF1KE5 PLQVHLPLRQIGEKD : ... .....::. CCDS36 SLCLQMQVEELNEKN 330 351 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:45:14 2016 done: Tue Nov 8 00:45:14 2016 Total Scan time: 2.630 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]