FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9609, 277 aa 1>>>pF1KE9609 277 - 277 aa - 277 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.0996+/-0.000452; mu= -1.1254+/- 0.028 mean_var=250.5892+/-50.334, 0's: 0 Z-trim(118.5): 23 B-trim: 27 in 1/55 Lambda= 0.081020 statistics sampled from 31408 (31431) to 31408 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.717), E-opt: 0.2 (0.369), width: 16 Scan time: 7.560 The best scores are: opt bits E(85289) NP_127490 (OMIM: 609177) ZW10 interactor isoform a ( 277) 1753 217.6 2.1e-56 NP_008988 (OMIM: 609177) ZW10 interactor isoform a ( 277) 1753 217.6 2.1e-56 XP_016871094 (OMIM: 609177) PREDICTED: ZW10 intera ( 261) 1288 163.2 4.7e-40 NP_001005413 (OMIM: 609177) ZW10 interactor isofor ( 230) 1072 137.9 1.7e-32 >>NP_127490 (OMIM: 609177) ZW10 interactor isoform a [Ho (277 aa) initn: 1753 init1: 1753 opt: 1753 Z-score: 1133.6 bits: 217.6 E(85289): 2.1e-56 Smith-Waterman score: 1753; 99.6% identity (99.6% similar) in 277 aa overlap (1-277:1-277) 10 20 30 40 50 60 pF1KE9 MEAAETEAEAAALEVLAEVAGILEPVGLQEEAELPAKILVEFVVDSQKKDKLLCSQLQVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_127 MEAAETEAEAAALEVLAEVAGILEPVGLQEEAELPAKILVEFVVDSQKKDKLLCSQLQVA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 DFLQNILAQEDTAKGLDPLASEDTSRQKAIAAKEQWKELKATYREHVEAIKIGLTKALTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_127 DFLQNILAQEDTAKGLDPLASEDTSRQKAIAAKEQWKELKATYREHVEAIKIGLTKALTQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 MEEAQRKRTQLREAFEQLQAKKQMAMEKRRAVQNQWQLQQEKHLQHLAEVSAEVRERKTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_127 MEEAQRKRTQLREAFEQLQAKKQMAMEKRRAVQNQWQLQQEKHLQHLAEVSAEVRERKTG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 TQQELDGVFQKLGNLKQQAEQERDKLQRYQTFLQLLYTLQGKLLFPEAEAEAENLPDDKP :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_127 TQQELDRVFQKLGNLKQQAEQERDKLQRYQTFLQLLYTLQGKLLFPEAEAEAENLPDDKP 190 200 210 220 230 240 250 260 270 pF1KE9 QQPTRPQEQSTGDTMGRDPGVSFKAVGLQPAGDVNLP ::::::::::::::::::::::::::::::::::::: NP_127 QQPTRPQEQSTGDTMGRDPGVSFKAVGLQPAGDVNLP 250 260 270 >>NP_008988 (OMIM: 609177) ZW10 interactor isoform a [Ho (277 aa) initn: 1753 init1: 1753 opt: 1753 Z-score: 1133.6 bits: 217.6 E(85289): 2.1e-56 Smith-Waterman score: 1753; 99.6% identity (99.6% similar) in 277 aa overlap (1-277:1-277) 10 20 30 40 50 60 pF1KE9 MEAAETEAEAAALEVLAEVAGILEPVGLQEEAELPAKILVEFVVDSQKKDKLLCSQLQVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_008 MEAAETEAEAAALEVLAEVAGILEPVGLQEEAELPAKILVEFVVDSQKKDKLLCSQLQVA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 DFLQNILAQEDTAKGLDPLASEDTSRQKAIAAKEQWKELKATYREHVEAIKIGLTKALTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_008 DFLQNILAQEDTAKGLDPLASEDTSRQKAIAAKEQWKELKATYREHVEAIKIGLTKALTQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 MEEAQRKRTQLREAFEQLQAKKQMAMEKRRAVQNQWQLQQEKHLQHLAEVSAEVRERKTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_008 MEEAQRKRTQLREAFEQLQAKKQMAMEKRRAVQNQWQLQQEKHLQHLAEVSAEVRERKTG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 TQQELDGVFQKLGNLKQQAEQERDKLQRYQTFLQLLYTLQGKLLFPEAEAEAENLPDDKP :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_008 TQQELDRVFQKLGNLKQQAEQERDKLQRYQTFLQLLYTLQGKLLFPEAEAEAENLPDDKP 190 200 210 220 230 240 250 260 270 pF1KE9 QQPTRPQEQSTGDTMGRDPGVSFKAVGLQPAGDVNLP ::::::::::::::::::::::::::::::::::::: NP_008 QQPTRPQEQSTGDTMGRDPGVSFKAVGLQPAGDVNLP 250 260 270 >>XP_016871094 (OMIM: 609177) PREDICTED: ZW10 interactor (261 aa) initn: 1286 init1: 1286 opt: 1288 Z-score: 840.2 bits: 163.2 E(85289): 4.7e-40 Smith-Waterman score: 1288; 84.7% identity (90.2% similar) in 255 aa overlap (1-255:1-247) 10 20 30 40 50 60 pF1KE9 MEAAETEAEAAALEVLAEVAGILEPVGLQEEAELPAKILVEFVVDSQKKDKLLCSQLQVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MEAAETEAEAAALEVLAEVAGILEPVGLQEEAELPAKILVEFVVDSQKKDKLLCSQLQVA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 DFLQNILAQEDTAKGLDPLASEDTSRQKAIAAKEQWKELKATYREHVEAIKIGLTKALTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DFLQNILAQEDTAKGLDPLASEDTSRQKAIAAKEQWKELKATYREHVEAIKIGLTKALTQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 MEEAQRKRTQLREAFEQLQAKKQMAMEKRRAVQNQWQLQQEKHLQHLAEVSAEVRERKTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MEEAQRKRTQLREAFEQLQAKKQMAMEKRRAVQNQWQLQQEKHLQHLAEVSAEVRERKTG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 TQQELDGVFQKLGNLKQQAEQERDKLQRYQTFLQLLYTLQGKLLFPEAEAEAENLPDDKP :::::: ::::::::::::::::::::: . .: :. ... . : :... XP_016 TQQELDRVFQKLGNLKQQAEQERDKLQRV-SCCSLRLRLRQRIF------QMIN-PSSRL 190 200 210 220 230 250 260 270 pF1KE9 QQPTRPQEQSTGDTMGRDPGVSFKAVGLQPAGDVNLP . .: :: :.:. XP_016 DPRSRVQETPWGETLVCPSRLLVYNLLEM 240 250 260 >>NP_001005413 (OMIM: 609177) ZW10 interactor isoform b (230 aa) initn: 1072 init1: 1072 opt: 1072 Z-score: 704.4 bits: 137.9 E(85289): 1.7e-32 Smith-Waterman score: 1360; 83.0% identity (83.0% similar) in 277 aa overlap (1-277:1-230) 10 20 30 40 50 60 pF1KE9 MEAAETEAEAAALEVLAEVAGILEPVGLQEEAELPAKILVEFVVDSQKKDKLLCSQLQVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEAAETEAEAAALEVLAEVAGILEPVGLQEEAELPAKILVEFVVDSQKKDKLLCSQLQVA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 DFLQNILAQEDTAKGLDPLASEDTSRQKAIAAKEQWKELKATYREHVEAIKIGLTKALTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DFLQNILAQEDTAKGLDPLASEDTSRQKAIAAKEQWKELKATYREHVEAIKIGLTKALTQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 MEEAQRKRTQLREAFEQLQAKKQMAMEKRRAVQNQWQLQQEKHLQHLAEVSAEVRERKTG ::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEEAQRKRTQLREAFEQLQAKKQMAMEKRRAVQNQWQLQQEKHLQHLAEVSAE------- 130 140 150 160 170 190 200 210 220 230 240 pF1KE9 TQQELDGVFQKLGNLKQQAEQERDKLQRYQTFLQLLYTLQGKLLFPEAEAEAENLPDDKP :::::::::::::::::::: NP_001 ----------------------------------------GKLLFPEAEAEAENLPDDKP 180 190 250 260 270 pF1KE9 QQPTRPQEQSTGDTMGRDPGVSFKAVGLQPAGDVNLP ::::::::::::::::::::::::::::::::::::: NP_001 QQPTRPQEQSTGDTMGRDPGVSFKAVGLQPAGDVNLP 200 210 220 230 277 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:42:06 2016 done: Sun Nov 6 06:42:07 2016 Total Scan time: 7.560 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]