FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4182, 727 aa 1>>>pF1KE4182 727 - 727 aa - 727 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.9465+/-0.000896; mu= 12.6207+/- 0.054 mean_var=102.9935+/-20.645, 0's: 0 Z-trim(108.7): 21 B-trim: 0 in 0/51 Lambda= 0.126377 statistics sampled from 10392 (10405) to 10392 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.32), width: 16 Scan time: 4.220 The best scores are: opt bits E(32554) CCDS7214.1 ZFAND4 gene_id:93550|Hs108|chr10 ( 727) 4866 898.0 0 CCDS60520.1 ZFAND4 gene_id:93550|Hs108|chr10 ( 653) 4340 802.1 0 >>CCDS7214.1 ZFAND4 gene_id:93550|Hs108|chr10 (727 aa) initn: 4866 init1: 4866 opt: 4866 Z-score: 4796.1 bits: 898.0 E(32554): 0 Smith-Waterman score: 4866; 100.0% identity (100.0% similar) in 727 aa overlap (1-727:1-727) 10 20 30 40 50 60 pF1KE4 MDNRKEPPFFNDDNMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 MDNRKEPPFFNDDNMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 EGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 EGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 EYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 EYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 LRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 KKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 KKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 TQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 TQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 SSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 SSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGAC 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 KVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 KVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAP 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 MSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 MSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDV 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 ISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQSTRGAGRLQNSGTGLST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 ISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQSTRGAGRLQNSGTGLST 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE4 NLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGECTTHHLPPVKAPLQTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 NLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGECTTHHLPPVKAPLQTK 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE4 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVN 670 680 690 700 710 720 pF1KE4 APKLPKI ::::::: CCDS72 APKLPKI >>CCDS60520.1 ZFAND4 gene_id:93550|Hs108|chr10 (653 aa) initn: 4340 init1: 4340 opt: 4340 Z-score: 4278.6 bits: 802.1 E(32554): 0 Smith-Waterman score: 4340; 100.0% identity (100.0% similar) in 653 aa overlap (75-727:1-653) 50 60 70 80 90 100 pF1KE4 SPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGP :::::::::::::::::::::::::::::: CCDS60 MELENDYCLNDYNISEGCTLKLVLAMRGGP 10 20 30 110 120 130 140 150 160 pF1KE4 INTRRVPTDDPLRKMAEYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 INTRRVPTDDPLRKMAEYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTL 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE4 TPLSDSSKKIDFHLHVLRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 TPLSDSSKKIDFHLHVLRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKM 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE4 KLLKAKMKNMNLSKKPKKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 KLLKAKMKNMNLSKKPKKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFG 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE4 NAYPPEISRNGISSLATQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 NAYPPEISRNGISSLATQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHL 220 230 240 250 260 270 350 360 370 380 390 400 pF1KE4 ELGNDQELADSVLHLGSSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 ELGNDQELADSVLHLGSSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASF 280 290 300 310 320 330 410 420 430 440 450 460 pF1KE4 AEGNADEQSSGLEGACKVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYREL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 AEGNADEQSSGLEGACKVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYREL 340 350 360 370 380 390 470 480 490 500 510 520 pF1KE4 SPHKNRLLSPLRCSAPMSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 SPHKNRLLSPLRCSAPMSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTT 400 410 420 430 440 450 530 540 550 560 570 580 pF1KE4 CFQGVKVDSLGKRSDVISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 CFQGVKVDSLGKRSDVISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQS 460 470 480 490 500 510 590 600 610 620 630 640 pF1KE4 TRGAGRLQNSGTGLSTNLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 TRGAGRLQNSGTGLSTNLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGE 520 530 540 550 560 570 650 660 670 680 690 700 pF1KE4 CTTHHLPPVKAPLQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 CTTHHLPPVKAPLQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDY 580 590 600 610 620 630 710 720 pF1KE4 KSAGRRYLHEANPVVNAPKLPKI ::::::::::::::::::::::: CCDS60 KSAGRRYLHEANPVVNAPKLPKI 640 650 727 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:31:36 2016 done: Sun Nov 6 01:31:37 2016 Total Scan time: 4.220 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]