FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5781, 644 aa 1>>>pF1KE5781 644 - 644 aa - 644 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1967+/-0.000371; mu= 19.9458+/- 0.023 mean_var=69.6912+/-14.189, 0's: 0 Z-trim(113.6): 281 B-trim: 0 in 0/50 Lambda= 0.153633 statistics sampled from 22659 (22973) to 22659 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.269), width: 16 Scan time: 8.690 The best scores are: opt bits E(85289) NP_001019799 (OMIM: 602069) neuropilin-1 isoform b ( 644) 4452 996.3 0 NP_001316997 (OMIM: 602069) neuropilin-1 isoform f ( 906) 4433 992.2 0 NP_003864 (OMIM: 602069) neuropilin-1 isoform a pr ( 923) 4433 992.2 0 XP_006717589 (OMIM: 602069) PREDICTED: neuropilin- ( 663) 4428 991.0 0 XP_006717585 (OMIM: 602069) PREDICTED: neuropilin- ( 907) 4428 991.1 0 XP_006717584 (OMIM: 602069) PREDICTED: neuropilin- ( 924) 4428 991.1 0 NP_001231902 (OMIM: 602069) neuropilin-1 isoform e ( 916) 4360 976.0 0 NP_001231901 (OMIM: 602069) neuropilin-1 isoform d ( 917) 4360 976.0 0 XP_011518057 (OMIM: 602069) PREDICTED: neuropilin- ( 656) 4355 974.8 0 XP_016872354 (OMIM: 602069) PREDICTED: neuropilin- ( 899) 4355 974.9 0 XP_006717588 (OMIM: 602069) PREDICTED: neuropilin- ( 888) 4073 912.4 0 XP_006717587 (OMIM: 602069) PREDICTED: neuropilin- ( 889) 4073 912.4 0 NP_001019800 (OMIM: 602069) neuropilin-1 isoform c ( 609) 4070 911.6 0 XP_011518058 (OMIM: 602069) PREDICTED: neuropilin- ( 628) 4065 910.5 0 XP_016872355 (OMIM: 602069) PREDICTED: neuropilin- ( 742) 3136 704.6 3.1e-202 XP_016860677 (OMIM: 602070) PREDICTED: neuropilin- ( 848) 2185 493.9 9.8e-139 XP_016860676 (OMIM: 602070) PREDICTED: neuropilin- ( 853) 2185 493.9 9.9e-139 XP_016860675 (OMIM: 602070) PREDICTED: neuropilin- ( 901) 2185 493.9 1e-138 NP_957719 (OMIM: 602070) neuropilin-2 isoform 5 pr ( 901) 2185 493.9 1e-138 NP_061004 (OMIM: 602070) neuropilin-2 isoform 4 pr ( 906) 2185 493.9 1e-138 NP_958436 (OMIM: 602070) neuropilin-2 isoform 3 pr ( 909) 2185 493.9 1e-138 NP_003863 (OMIM: 602070) neuropilin-2 isoform 2 pr ( 926) 2185 493.9 1.1e-138 XP_016860674 (OMIM: 602070) PREDICTED: neuropilin- ( 926) 2185 493.9 1.1e-138 NP_957718 (OMIM: 602070) neuropilin-2 isoform 1 pr ( 931) 2185 493.9 1.1e-138 XP_005246990 (OMIM: 602070) PREDICTED: neuropilin- ( 931) 2185 493.9 1.1e-138 XP_005246991 (OMIM: 602070) PREDICTED: neuropilin- ( 931) 2185 493.9 1.1e-138 NP_957716 (OMIM: 602070) neuropilin-2 isoform 6 pr ( 555) 1998 452.3 2.1e-126 NP_002584 (OMIM: 600270) procollagen C-endopeptida ( 449) 546 130.4 1.3e-29 NP_005919 (OMIM: 602281) lactadherin isoform a pre ( 387) 541 129.3 2.6e-29 NP_001265571 (OMIM: 606018) EGF-like repeat and di ( 470) 539 128.9 4.1e-29 NP_005702 (OMIM: 606018) EGF-like repeat and disco ( 480) 539 128.9 4.2e-29 NP_001297249 (OMIM: 602281) lactadherin isoform c ( 379) 534 127.7 7.4e-29 NP_001297248 (OMIM: 602281) lactadherin isoform d ( 343) 528 126.4 1.7e-28 NP_001297250 (OMIM: 602281) lactadherin isoform e ( 275) 506 121.4 4.2e-27 XP_011530516 (OMIM: 606742,613087) PREDICTED: toll ( 837) 475 114.9 1.2e-24 XP_016864059 (OMIM: 606742,613087) PREDICTED: toll ( 964) 475 114.9 1.4e-24 NP_036596 (OMIM: 606742,613087) tolloid-like prote (1013) 475 114.9 1.4e-24 XP_011518013 (OMIM: 261100,602997) PREDICTED: cubi (2237) 407 100.1 9.1e-20 XP_011518012 (OMIM: 261100,602997) PREDICTED: cubi (2277) 407 100.1 9.2e-20 XP_011518011 (OMIM: 261100,602997) PREDICTED: cubi (2285) 407 100.1 9.3e-20 XP_011518010 (OMIM: 261100,602997) PREDICTED: cubi (2867) 407 100.2 1.1e-19 NP_963840 (OMIM: 612320) CUB domain-containing pro ( 449) 397 97.4 1.2e-19 NP_001072 (OMIM: 261100,602997) cubilin precursor (3623) 407 100.2 1.3e-19 NP_001108086 (OMIM: 602281) lactadherin isoform b ( 335) 381 93.8 1.1e-18 NP_063916 (OMIM: 134500,300841,306700) coagulation ( 216) 356 88.1 3.6e-17 NP_036597 (OMIM: 606743) tolloid-like protein 2 pr (1015) 358 89.0 9e-17 XP_011542919 (OMIM: 112264,614856) PREDICTED: bone ( 622) 353 87.7 1.3e-16 XP_016869227 (OMIM: 112264,614856) PREDICTED: bone ( 717) 353 87.8 1.5e-16 NP_001190 (OMIM: 112264,614856) bone morphogenetic ( 730) 353 87.8 1.5e-16 XP_006716449 (OMIM: 112264,614856) PREDICTED: bone ( 813) 353 87.8 1.6e-16 >>NP_001019799 (OMIM: 602069) neuropilin-1 isoform b pre (644 aa) initn: 4452 init1: 4452 opt: 4452 Z-score: 5329.0 bits: 996.3 E(85289): 0 Smith-Waterman score: 4452; 100.0% identity (100.0% similar) in 644 aa overlap (1-644:1-644) 10 20 30 40 50 60 pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV 550 560 570 580 590 600 610 620 630 640 pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK :::::::::::::::::::::::::::::::::::::::::::: NP_001 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK 610 620 630 640 >>NP_001316997 (OMIM: 602069) neuropilin-1 isoform f pre (906 aa) initn: 4433 init1: 4433 opt: 4433 Z-score: 5304.1 bits: 992.2 E(85289): 0 Smith-Waterman score: 4433; 100.0% identity (100.0% similar) in 641 aa overlap (1-641:1-641) 10 20 30 40 50 60 pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV 550 560 570 580 590 600 610 620 630 640 pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK ::::::::::::::::::::::::::::::::::::::::: NP_001 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF 610 620 630 640 650 660 NP_001 CHWEHDNHVQLKWSVLTSKTGPIQDHTGDGNFIYSQADENQKGKVARLVSPVVYSQNSAH 670 680 690 700 710 720 >>NP_003864 (OMIM: 602069) neuropilin-1 isoform a precur (923 aa) initn: 4433 init1: 4433 opt: 4433 Z-score: 5304.0 bits: 992.2 E(85289): 0 Smith-Waterman score: 4433; 100.0% identity (100.0% similar) in 641 aa overlap (1-641:1-641) 10 20 30 40 50 60 pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV 550 560 570 580 590 600 610 620 630 640 pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK ::::::::::::::::::::::::::::::::::::::::: NP_003 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF 610 620 630 640 650 660 NP_003 CHWEHDNHVQLKWSVLTSKTGPIQDHTGDGNFIYSQADENQKGKVARLVSPVVYSQNSAH 670 680 690 700 710 720 >>XP_006717589 (OMIM: 602069) PREDICTED: neuropilin-1 is (663 aa) initn: 4428 init1: 4428 opt: 4428 Z-score: 5300.1 bits: 991.0 E(85289): 0 Smith-Waterman score: 4428; 99.8% identity (100.0% similar) in 641 aa overlap (1-641:1-641) 10 20 30 40 50 60 pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: XP_006 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFVP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV 550 560 570 580 590 600 610 620 630 640 pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK ::::::::::::::::::::::::::::::::::::::::: XP_006 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSARLEVSTLNLSLHNPPQQK 610 620 630 640 650 660 XP_006 ALI >>XP_006717585 (OMIM: 602069) PREDICTED: neuropilin-1 is (907 aa) initn: 4428 init1: 4428 opt: 4428 Z-score: 5298.1 bits: 991.1 E(85289): 0 Smith-Waterman score: 4428; 99.8% identity (100.0% similar) in 641 aa overlap (1-641:1-641) 10 20 30 40 50 60 pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: XP_006 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFVP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV 550 560 570 580 590 600 610 620 630 640 pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK ::::::::::::::::::::::::::::::::::::::::: XP_006 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF 610 620 630 640 650 660 XP_006 CHWEHDNHVQLKWSVLTSKTGPIQDHTAGDGNFIYSQADENQKGKVARLVSPVVYSQNSA 670 680 690 700 710 720 >>XP_006717584 (OMIM: 602069) PREDICTED: neuropilin-1 is (924 aa) initn: 4428 init1: 4428 opt: 4428 Z-score: 5298.0 bits: 991.1 E(85289): 0 Smith-Waterman score: 4428; 99.8% identity (100.0% similar) in 641 aa overlap (1-641:1-641) 10 20 30 40 50 60 pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: XP_006 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFVP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV 550 560 570 580 590 600 610 620 630 640 pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK ::::::::::::::::::::::::::::::::::::::::: XP_006 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF 610 620 630 640 650 660 XP_006 CHWEHDNHVQLKWSVLTSKTGPIQDHTAGDGNFIYSQADENQKGKVARLVSPVVYSQNSA 670 680 690 700 710 720 >>NP_001231902 (OMIM: 602069) neuropilin-1 isoform e pre (916 aa) initn: 4274 init1: 4274 opt: 4360 Z-score: 5216.6 bits: 976.0 E(85289): 0 Smith-Waterman score: 4360; 98.9% identity (98.9% similar) in 641 aa overlap (1-641:1-634) 10 20 30 40 50 60 pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV 550 560 570 580 590 600 610 620 630 640 pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK ::::::::::::: ::::::::::::::::::::: NP_001 DECDDDQANCHSG-------TGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF 610 620 630 640 650 NP_001 CHWEHDNHVQLKWSVLTSKTGPIQDHTGDGNFIYSQADENQKGKVARLVSPVVYSQNSAH 660 670 680 690 700 710 >>NP_001231901 (OMIM: 602069) neuropilin-1 isoform d pre (917 aa) initn: 4274 init1: 4274 opt: 4360 Z-score: 5216.6 bits: 976.0 E(85289): 0 Smith-Waterman score: 4360; 98.9% identity (98.9% similar) in 641 aa overlap (1-641:1-634) 10 20 30 40 50 60 pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV 550 560 570 580 590 600 610 620 630 640 pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK ::::::::::::: ::::::::::::::::::::: NP_001 DECDDDQANCHSG-------TGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF 610 620 630 640 650 NP_001 CHWEHDNHVQLKWSVLTSKTGPIQDHTAGDGNFIYSQADENQKGKVARLVSPVVYSQNSA 660 670 680 690 700 710 >>XP_011518057 (OMIM: 602069) PREDICTED: neuropilin-1 is (656 aa) initn: 4269 init1: 4269 opt: 4355 Z-score: 5212.7 bits: 974.8 E(85289): 0 Smith-Waterman score: 4355; 98.8% identity (98.9% similar) in 641 aa overlap (1-641:1-634) 10 20 30 40 50 60 pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: XP_011 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFVP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV 550 560 570 580 590 600 610 620 630 640 pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK ::::::::::::: ::::::::::::::::::::: XP_011 DECDDDQANCHSG-------TGGTTVLATEKPTVIDSTIQSARLEVSTLNLSLHNPPQQK 610 620 630 640 650 XP_011 ALI >>XP_016872354 (OMIM: 602069) PREDICTED: neuropilin-1 is (899 aa) initn: 4269 init1: 4269 opt: 4355 Z-score: 5210.7 bits: 974.9 E(85289): 0 Smith-Waterman score: 4355; 98.8% identity (98.9% similar) in 641 aa overlap (1-641:1-634) 10 20 30 40 50 60 pF1KE5 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: XP_016 IKFVSDYETHGAGFSIRYEIFKRGPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFVP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VYGCKITDYPCSGMLGMVSGLISDSQITSSNQGDRNWMPENIRLVTSRSGWALPPAPHSY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 INEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV 550 560 570 580 590 600 610 620 630 640 pF1KE5 DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSGIK ::::::::::::: ::::::::::::::::::::: XP_016 DECDDDQANCHSG-------TGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTF 610 620 630 640 650 XP_016 CHWEHDNHVQLKWSVLTSKTGPIQDHTGDGNFIYSQADENQKGKVARLVSPVVYSQNSAH 660 670 680 690 700 710 644 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 06:35:22 2016 done: Tue Nov 8 06:35:23 2016 Total Scan time: 8.690 Total Display time: 0.150 Function used was FASTA [36.3.4 Apr, 2011]