FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3887, 342 aa 1>>>pF1KE3887 342 - 342 aa - 342 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3700+/-0.000936; mu= 11.6736+/- 0.056 mean_var=92.2253+/-18.634, 0's: 0 Z-trim(107.3): 19 B-trim: 156 in 1/50 Lambda= 0.133552 statistics sampled from 9636 (9641) to 9636 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.654), E-opt: 0.2 (0.288), width: 16 Scan time: 1.260 The best scores are: opt bits E(33420) CCDS7100.1 PRPF18 gene_id:8559|Hs109|chr10 ( 342) 2224 438.6 3.7e-123 >>CCDS7100.1 PRPF18 gene_id:8559|Hs109|chr10 (342 aa) initn: 2224 init1: 2224 opt: 2224 Z-score: 2324.7 bits: 438.6 E(33420): 3.7e-123 Smith-Waterman score: 2224; 100.0% identity (100.0% similar) in 342 aa overlap (1-342:1-342) 10 20 30 40 50 60 pF1KE3 MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 SSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 SSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 KGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 KGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 DHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 NLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS71 NLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSK 250 260 270 280 290 300 310 320 330 340 pF1KE3 HVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL :::::::::::::::::::::::::::::::::::::::::: CCDS71 HVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 310 320 330 340 342 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Wed Aug 4 20:40:52 2021 done: Wed Aug 4 20:40:52 2021 Total Scan time: 1.260 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]