FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB8520, 874 aa 1>>>pF1KB8520 874 - 874 aa - 874 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.4707+/-0.000858; mu= 8.9518+/- 0.052 mean_var=191.4831+/-38.324, 0's: 0 Z-trim(113.3): 16 B-trim: 0 in 0/53 Lambda= 0.092685 statistics sampled from 13957 (13967) to 13957 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.749), E-opt: 0.2 (0.429), width: 16 Scan time: 4.830 The best scores are: opt bits E(32554) CCDS7095.1 MCM10 gene_id:55388|Hs108|chr10 ( 874) 5744 780.8 0 CCDS7096.1 MCM10 gene_id:55388|Hs108|chr10 ( 875) 5732 779.2 0 >>CCDS7095.1 MCM10 gene_id:55388|Hs108|chr10 (874 aa) initn: 5744 init1: 5744 opt: 5744 Z-score: 4159.6 bits: 780.8 E(32554): 0 Smith-Waterman score: 5744; 100.0% identity (100.0% similar) in 874 aa overlap (1-874:1-874) 10 20 30 40 50 60 pF1KB8 MDEEEDNLSLLTALLEENESALDCNSEENNFLTRENGEPDAFDELFDADGDGESYTEEAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 MDEEEDNLSLLTALLEENESALDCNSEENNFLTRENGEPDAFDELFDADGDGESYTEEAD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 DGETGETRDEKENLATLFGDMEDLTDEEEVPASQSTENRVLPAPAPRREKTNEELQEELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 DGETGETRDEKENLATLFGDMEDLTDEEEVPASQSTENRVLPAPAPRREKTNEELQEELR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB8 NLQEQMKALQEQLKVTTIKQTASPARLQKSPEKSPRPPLKERRVQRIQESTCFSAELDVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 NLQEQMKALQEQLKVTTIKQTASPARLQKSPEKSPRPPLKERRVQRIQESTCFSAELDVP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB8 ALPRTKRVARTPKASPPDPKSSSSRMTSAPSQPLQTISRNKPSGITRGQIVGTPGSSGET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 ALPRTKRVARTPKASPPDPKSSSSRMTSAPSQPLQTISRNKPSGITRGQIVGTPGSSGET 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB8 TQPICVEAFSGLRLRRPRVSSTEMNKKMTGRKLIRLSQIKEKMAREKLEEIDWVTFGVIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 TQPICVEAFSGLRLRRPRVSSTEMNKKMTGRKLIRLSQIKEKMAREKLEEIDWVTFGVIL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB8 KKVTPQSVNSGKTFSIWKLNDLRDLTQCVSLFLFGEVHKALWKTEQGTVVGILNANPMKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 KKVTPQSVNSGKTFSIWKLNDLRDLTQCVSLFLFGEVHKALWKTEQGTVVGILNANPMKP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB8 KDGSEEVCLSIDHPQKVLIMGEALDLGTCKAKKKNGEPCTQTVNLRDCEYCQYHVQAQYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 KDGSEEVCLSIDHPQKVLIMGEALDLGTCKAKKKNGEPCTQTVNLRDCEYCQYHVQAQYK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB8 KLSAKRADLQSTFSGGRIPKKFARRGTSLKERLCQDGFYYGGVSSASYAASIAAAVAPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 KLSAKRADLQSTFSGGRIPKKFARRGTSLKERLCQDGFYYGGVSSASYAASIAAAVAPKK 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB8 KIQTTLSNLVVKGTNLIIQETRQKLGIPQKSLSCSEEFKELMDLPTCGARNLKQHLAKAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 KIQTTLSNLVVKGTNLIIQETRQKLGIPQKSLSCSEEFKELMDLPTCGARNLKQHLAKAT 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB8 ASGIMGSPKPAIKSISASALLKQQKQRMLEMRRRKSEEIQKRFLQSSSEVESPAVPSSSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 ASGIMGSPKPAIKSISASALLKQQKQRMLEMRRRKSEEIQKRFLQSSSEVESPAVPSSSR 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB8 QPPAQPPRTGSEFPRLEGAPATMTPKLGRGVLEGDDVLFYDESPPPRPKLSALAEAKKLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 QPPAQPPRTGSEFPRLEGAPATMTPKLGRGVLEGDDVLFYDESPPPRPKLSALAEAKKLA 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB8 AITKLRAKGQVLTKTNPNSIKKKQKDPQDILEVKERVEKNTMFSSQAEDELEPARKKRRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 AITKLRAKGQVLTKTNPNSIKKKQKDPQDILEVKERVEKNTMFSSQAEDELEPARKKRRE 670 680 690 700 710 720 730 740 750 760 770 780 pF1KB8 QLAYLESEEFQKILKAKSKHTGILKEAEAEMQERYFEPLVKKEQMEEKMRNIREVKCRVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 QLAYLESEEFQKILKAKSKHTGILKEAEAEMQERYFEPLVKKEQMEEKMRNIREVKCRVV 730 740 750 760 770 780 790 800 810 820 830 840 pF1KB8 TCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKCPCGNRSISLDRLPNKHCSNCGLYKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 TCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKCPCGNRSISLDRLPNKHCSNCGLYKW 790 800 810 820 830 840 850 860 870 pF1KB8 ERDGMLKEKTGPKIGGETLLPRGEEHAKFLNSLK :::::::::::::::::::::::::::::::::: CCDS70 ERDGMLKEKTGPKIGGETLLPRGEEHAKFLNSLK 850 860 870 >>CCDS7096.1 MCM10 gene_id:55388|Hs108|chr10 (875 aa) initn: 4779 init1: 4779 opt: 5732 Z-score: 4151.0 bits: 779.2 E(32554): 0 Smith-Waterman score: 5732; 99.9% identity (99.9% similar) in 875 aa overlap (1-874:1-875) 10 20 30 40 50 60 pF1KB8 MDEEEDNLSLLTALLEENESALDCNSEENNFLTRENGEPDAFDELFDADGDGESYTEEAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 MDEEEDNLSLLTALLEENESALDCNSEENNFLTRENGEPDAFDELFDADGDGESYTEEAD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB8 DGETGETRDEKENLATLFGDMEDLTDEEEVPASQSTENRVLPAPAPRREKTNEELQEELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 DGETGETRDEKENLATLFGDMEDLTDEEEVPASQSTENRVLPAPAPRREKTNEELQEELR 70 80 90 100 110 120 130 140 150 160 170 pF1KB8 NLQEQMKALQEQLKVTTIKQTASPARLQKSP-EKSPRPPLKERRVQRIQESTCFSAELDV ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: CCDS70 NLQEQMKALQEQLKVTTIKQTASPARLQKSPVEKSPRPPLKERRVQRIQESTCFSAELDV 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB8 PALPRTKRVARTPKASPPDPKSSSSRMTSAPSQPLQTISRNKPSGITRGQIVGTPGSSGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 PALPRTKRVARTPKASPPDPKSSSSRMTSAPSQPLQTISRNKPSGITRGQIVGTPGSSGE 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB8 TTQPICVEAFSGLRLRRPRVSSTEMNKKMTGRKLIRLSQIKEKMAREKLEEIDWVTFGVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 TTQPICVEAFSGLRLRRPRVSSTEMNKKMTGRKLIRLSQIKEKMAREKLEEIDWVTFGVI 250 260 270 280 290 300 300 310 320 330 340 350 pF1KB8 LKKVTPQSVNSGKTFSIWKLNDLRDLTQCVSLFLFGEVHKALWKTEQGTVVGILNANPMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 LKKVTPQSVNSGKTFSIWKLNDLRDLTQCVSLFLFGEVHKALWKTEQGTVVGILNANPMK 310 320 330 340 350 360 360 370 380 390 400 410 pF1KB8 PKDGSEEVCLSIDHPQKVLIMGEALDLGTCKAKKKNGEPCTQTVNLRDCEYCQYHVQAQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 PKDGSEEVCLSIDHPQKVLIMGEALDLGTCKAKKKNGEPCTQTVNLRDCEYCQYHVQAQY 370 380 390 400 410 420 420 430 440 450 460 470 pF1KB8 KKLSAKRADLQSTFSGGRIPKKFARRGTSLKERLCQDGFYYGGVSSASYAASIAAAVAPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 KKLSAKRADLQSTFSGGRIPKKFARRGTSLKERLCQDGFYYGGVSSASYAASIAAAVAPK 430 440 450 460 470 480 480 490 500 510 520 530 pF1KB8 KKIQTTLSNLVVKGTNLIIQETRQKLGIPQKSLSCSEEFKELMDLPTCGARNLKQHLAKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 KKIQTTLSNLVVKGTNLIIQETRQKLGIPQKSLSCSEEFKELMDLPTCGARNLKQHLAKA 490 500 510 520 530 540 540 550 560 570 580 590 pF1KB8 TASGIMGSPKPAIKSISASALLKQQKQRMLEMRRRKSEEIQKRFLQSSSEVESPAVPSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 TASGIMGSPKPAIKSISASALLKQQKQRMLEMRRRKSEEIQKRFLQSSSEVESPAVPSSS 550 560 570 580 590 600 600 610 620 630 640 650 pF1KB8 RQPPAQPPRTGSEFPRLEGAPATMTPKLGRGVLEGDDVLFYDESPPPRPKLSALAEAKKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 RQPPAQPPRTGSEFPRLEGAPATMTPKLGRGVLEGDDVLFYDESPPPRPKLSALAEAKKL 610 620 630 640 650 660 660 670 680 690 700 710 pF1KB8 AAITKLRAKGQVLTKTNPNSIKKKQKDPQDILEVKERVEKNTMFSSQAEDELEPARKKRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 AAITKLRAKGQVLTKTNPNSIKKKQKDPQDILEVKERVEKNTMFSSQAEDELEPARKKRR 670 680 690 700 710 720 720 730 740 750 760 770 pF1KB8 EQLAYLESEEFQKILKAKSKHTGILKEAEAEMQERYFEPLVKKEQMEEKMRNIREVKCRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 EQLAYLESEEFQKILKAKSKHTGILKEAEAEMQERYFEPLVKKEQMEEKMRNIREVKCRV 730 740 750 760 770 780 780 790 800 810 820 830 pF1KB8 VTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKCPCGNRSISLDRLPNKHCSNCGLYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 VTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKCPCGNRSISLDRLPNKHCSNCGLYK 790 800 810 820 830 840 840 850 860 870 pF1KB8 WERDGMLKEKTGPKIGGETLLPRGEEHAKFLNSLK ::::::::::::::::::::::::::::::::::: CCDS70 WERDGMLKEKTGPKIGGETLLPRGEEHAKFLNSLK 850 860 870 874 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:35:17 2016 done: Sun Nov 6 15:35:18 2016 Total Scan time: 4.830 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]