FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1695, 202 aa 1>>>pF1KE1695 202 - 202 aa - 202 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1776+/-0.000687; mu= 14.2895+/- 0.041 mean_var=62.4144+/-12.724, 0's: 0 Z-trim(110.1): 12 B-trim: 469 in 1/51 Lambda= 0.162342 statistics sampled from 11331 (11342) to 11331 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.348), width: 16 Scan time: 2.210 The best scores are: opt bits E(32554) CCDS7017.1 C8G gene_id:733|Hs108|chr9 ( 202) 1327 318.7 1.5e-87 CCDS7006.1 LCN15 gene_id:389812|Hs108|chr9 ( 184) 248 65.9 1.7e-11 >>CCDS7017.1 C8G gene_id:733|Hs108|chr9 (202 aa) initn: 1327 init1: 1327 opt: 1327 Z-score: 1685.0 bits: 318.7 E(32554): 1.5e-87 Smith-Waterman score: 1327; 99.5% identity (99.5% similar) in 202 aa overlap (1-202:1-202) 10 20 30 40 50 60 pF1KE1 MLPPGTATLLTLLLAAGSLGQKPQRPRRPASPISTIQPKANFDAQQFAGTWLLVAVGSAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 MLPPGTATLLTLLLAAGSLGQKPQRPRRPASPISTIQPKANFDAQQFAGTWLLVAVGSAC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RFLQEQGHRAEATTLHVAPQGTAMAVSTFRKLDGICWQVRQLYGDTGVLGRFLLQARGAR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: CCDS70 RFLQEQGHRAEATTLHVAPQGTAMAVSTFRKLDGICWQVRQLYGDTGVLGRFLLQARDAR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GAVHVVVAETDYQSFAVLYLERAGQLSVKLYARSLPVSDSVLSGFEQRVQEAHLTEDQIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 GAVHVVVAETDYQSFAVLYLERAGQLSVKLYARSLPVSDSVLSGFEQRVQEAHLTEDQIF 130 140 150 160 170 180 190 200 pF1KE1 YFPKYGFCEAADQFHVLDEVRR :::::::::::::::::::::: CCDS70 YFPKYGFCEAADQFHVLDEVRR 190 200 >>CCDS7006.1 LCN15 gene_id:389812|Hs108|chr9 (184 aa) initn: 172 init1: 83 opt: 248 Z-score: 319.9 bits: 65.9 E(32554): 1.7e-11 Smith-Waterman score: 248; 34.0% identity (61.6% similar) in 159 aa overlap (36-188:24-176) 10 20 30 40 50 60 pF1KE1 TATLLTLLLAAGSLGQKPQRPRRPASPISTIQPKANFDAQQFAGTWLLVAVGSACR-FLQ .:: .:.:..:.: : .:...: :: :: CCDS70 MMSFLLGAILTLLWAPTAQAEVLLQP--DFNAEKFSGLWYVVSMASDCRVFLG 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 EQGHRAEAT-TLHVAPQGTAMAVSTFRKLDGICWQVRQLYGDTGVLGRFLLQARGARGAV .. : . .: ... . .: . : :: : :: : .: :.: . : : . CCDS70 KKDHLSMSTRAIRPTEEGGLHVHMEFPGADG-CNQVDAEYLKVGSEGHFRVPAL---GYL 60 70 80 90 100 130 140 150 160 170 pF1KE1 HVVVAETDYQSFAVLYL--ERAGQLS--VKLYARSLPVSDSVLSGFEQRVQEAHLTEDQI : ...:::.::::::. : : :: :.::.:. :: ..:..:.. : .:.. CCDS70 DVRIVDTDYSSFAVLYIYKELEGALSTMVQLYSRTQDVSPQALKSFQDFYPTLGLPKDMM 110 120 130 140 150 160 180 190 200 pF1KE1 FYFPKYGFCEAADQFHVLDEVRR ..:. : CCDS70 VMLPQSDACNPESKEAP 170 180 202 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:37:13 2016 done: Sun Nov 6 15:37:14 2016 Total Scan time: 2.210 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]