FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5263, 172 aa 1>>>pF1KE5263 172 - 172 aa - 172 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.3935+/-0.000266; mu= 17.7405+/- 0.017 mean_var=53.9729+/-10.760, 0's: 0 Z-trim(119.2): 9 B-trim: 0 in 0/50 Lambda= 0.174577 statistics sampled from 32859 (32868) to 32859 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.385), width: 16 Scan time: 4.640 The best scores are: opt bits E(85289) NP_060056 (OMIM: 613104) calcium channel flower ho ( 172) 1151 296.8 1.1e-80 NP_001229298 (OMIM: 613104) calcium channel flower ( 233) 977 253.1 2.3e-67 XP_011516487 (OMIM: 613104) PREDICTED: calcium cha ( 144) 861 223.7 9.7e-59 XP_011516488 (OMIM: 613104) PREDICTED: calcium cha ( 109) 701 183.3 1.1e-46 XP_011516483 (OMIM: 613104) PREDICTED: calcium cha ( 205) 687 180.0 2e-45 XP_011516484 (OMIM: 613104) PREDICTED: calcium cha ( 170) 527 139.6 2.3e-33 NP_001129247 (OMIM: 613104) calcium channel flower ( 130) 470 125.2 4e-29 NP_001229299 (OMIM: 613104) calcium channel flower ( 191) 467 124.6 9e-29 XP_011516486 (OMIM: 613104) PREDICTED: calcium cha ( 163) 215 61.0 1e-09 >>NP_060056 (OMIM: 613104) calcium channel flower homolo (172 aa) initn: 1151 init1: 1151 opt: 1151 Z-score: 1569.2 bits: 296.8 E(85289): 1.1e-80 Smith-Waterman score: 1151; 100.0% identity (100.0% similar) in 172 aa overlap (1-172:1-172) 10 20 30 40 50 60 pF1KE5 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL :::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL 130 140 150 160 170 >>NP_001229298 (OMIM: 613104) calcium channel flower hom (233 aa) initn: 971 init1: 971 opt: 977 Z-score: 1330.6 bits: 253.1 E(85289): 2.3e-67 Smith-Waterman score: 977; 93.1% identity (96.2% similar) in 159 aa overlap (1-157:1-158) 10 20 30 40 50 60 pF1KE5 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 TLLGNAIAFATGVLYGLSALGKKG--DAISYARIQQQRQQADEEKLAETLEGEL :::::::::::::::::::::::. .: :.: :. :. NP_001 TLLGNAIAFATGVLYGLSALGKKAQTEAGSFA-AQHPREPGPFSEGTRQAFATPAVVSGE 130 140 150 160 170 NP_001 IRMPAGAMRSPMPGSSSRGSRRMRRSSRRPWRGSCEGLGAPPSLSPLLALCGSK 180 190 200 210 220 230 >>XP_011516487 (OMIM: 613104) PREDICTED: calcium channel (144 aa) initn: 861 init1: 861 opt: 861 Z-score: 1175.5 bits: 223.7 E(85289): 9.7e-59 Smith-Waterman score: 861; 99.2% identity (100.0% similar) in 132 aa overlap (41-172:13-144) 20 30 40 50 60 70 pF1KE5 SASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAAGVWMIMNAFI .::::::::::::::::::::::::::::: XP_011 MLTAAGSTAELSACAISGLFNCITIHPLNIAAGVWMIMNAFI 10 20 30 40 80 90 100 110 120 130 pF1KE5 LLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFA 50 60 70 80 90 100 140 150 160 170 pF1KE5 TGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL :::::::::::::::::::::::::::::::::::::::::: XP_011 TGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL 110 120 130 140 >>XP_011516488 (OMIM: 613104) PREDICTED: calcium channel (109 aa) initn: 701 init1: 701 opt: 701 Z-score: 959.4 bits: 183.3 E(85289): 1.1e-46 Smith-Waterman score: 701; 100.0% identity (100.0% similar) in 109 aa overlap (64-172:1-109) 40 50 60 70 80 90 pF1KE5 SGVLGAVSCAISGLFNCITIHPLNIAAGVWMIMNAFILLLCEAPFCCQFIEFANTVAEKV :::::::::::::::::::::::::::::: XP_011 MIMNAFILLLCEAPFCCQFIEFANTVAEKV 10 20 30 100 110 120 130 140 150 pF1KE5 DRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFATGVLYGLSALGKKGDAISYARIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFATGVLYGLSALGKKGDAISYARIQ 40 50 60 70 80 90 160 170 pF1KE5 QQRQQADEEKLAETLEGEL ::::::::::::::::::: XP_011 QQRQQADEEKLAETLEGEL 100 >>XP_011516483 (OMIM: 613104) PREDICTED: calcium channel (205 aa) initn: 681 init1: 681 opt: 687 Z-score: 936.6 bits: 180.0 E(85289): 2e-45 Smith-Waterman score: 687; 89.9% identity (95.0% similar) in 119 aa overlap (41-157:13-130) 20 30 40 50 60 70 pF1KE5 SASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAAGVWMIMNAFI .::::::::::::::::::::::::::::: XP_011 MLTAAGSTAELSACAISGLFNCITIHPLNIAAGVWMIMNAFI 10 20 30 40 80 90 100 110 120 130 pF1KE5 LLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFA 50 60 70 80 90 100 140 150 160 170 pF1KE5 TGVLYGLSALGKKG--DAISYARIQQQRQQADEEKLAETLEGEL :::::::::::::. .: :.: :. :. XP_011 TGVLYGLSALGKKAQTEAGSFA-AQHPREPGPFSEGTRQAFATPAVVSGEIRMPAGAMRS 110 120 130 140 150 160 >>XP_011516484 (OMIM: 613104) PREDICTED: calcium channel (170 aa) initn: 521 init1: 521 opt: 527 Z-score: 719.9 bits: 139.6 E(85289): 2.3e-33 Smith-Waterman score: 527; 88.5% identity (93.8% similar) in 96 aa overlap (64-157:1-95) 40 50 60 70 80 90 pF1KE5 SGVLGAVSCAISGLFNCITIHPLNIAAGVWMIMNAFILLLCEAPFCCQFIEFANTVAEKV :::::::::::::::::::::::::::::: XP_011 MIMNAFILLLCEAPFCCQFIEFANTVAEKV 10 20 30 100 110 120 130 140 150 pF1KE5 DRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFATGVLYGLSALGKKG--DAISYAR ::::::::::::::::::::::::::::::::::::::::::::::::::. .: :.: XP_011 DRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFATGVLYGLSALGKKAQTEAGSFA- 40 50 60 70 80 160 170 pF1KE5 IQQQRQQADEEKLAETLEGEL :. :. XP_011 AQHPREPGPFSEGTRQAFATPAVVSGEIRMPAGAMRSPMPGSSSRGSRRMRRSSRRPWRG 90 100 110 120 130 140 >>NP_001129247 (OMIM: 613104) calcium channel flower hom (130 aa) initn: 478 init1: 466 opt: 470 Z-score: 643.9 bits: 125.2 E(85289): 4e-29 Smith-Waterman score: 754; 75.0% identity (75.6% similar) in 172 aa overlap (1-172:1-130) 10 20 30 40 50 60 pF1KE5 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT ::::.: :::::::::::: NP_001 GVWMMM------------------------------------------AVVPIVISLTLT 70 130 140 150 160 170 pF1KE5 TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL :::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL 80 90 100 110 120 130 >>NP_001229299 (OMIM: 613104) calcium channel flower hom (191 aa) initn: 466 init1: 466 opt: 467 Z-score: 637.5 bits: 124.6 E(85289): 9e-29 Smith-Waterman score: 580; 66.0% identity (69.8% similar) in 159 aa overlap (1-157:1-116) 10 20 30 40 50 60 pF1KE5 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT ::::.: :::::::::::: NP_001 GVWMMM------------------------------------------AVVPIVISLTLT 70 130 140 150 160 170 pF1KE5 TLLGNAIAFATGVLYGLSALGKKG--DAISYARIQQQRQQADEEKLAETLEGEL :::::::::::::::::::::::. .: :.: :. :. NP_001 TLLGNAIAFATGVLYGLSALGKKAQTEAGSFA-AQHPREPGPFSEGTRQAFATPAVVSGE 80 90 100 110 120 130 NP_001 IRMPAGAMRSPMPGSSSRGSRRMRRSSRRPWRGSCEGLGAPPSLSPLLALCGSK 140 150 160 170 180 190 >>XP_011516486 (OMIM: 613104) PREDICTED: calcium channel (163 aa) initn: 209 init1: 209 opt: 215 Z-score: 295.5 bits: 61.0 E(85289): 1e-09 Smith-Waterman score: 290; 53.8% identity (59.7% similar) in 119 aa overlap (41-157:13-88) 20 30 40 50 60 70 pF1KE5 SASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAAGVWMIMNAFI .:::::::::::::::::::::::.: XP_011 MLTAAGSTAELSACAISGLFNCITIHPLNIAAGVWMMM---- 10 20 30 80 90 100 110 120 130 pF1KE5 LLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFA :::::::::::::::::::::: XP_011 --------------------------------------AVVPIVISLTLTTLLGNAIAFA 40 50 60 140 150 160 170 pF1KE5 TGVLYGLSALGKKG--DAISYARIQQQRQQADEEKLAETLEGEL :::::::::::::. .: :.: :. :. XP_011 TGVLYGLSALGKKAQTEAGSFA-AQHPREPGPFSEGTRQAFATPAVVSGEIRMPAGAMRS 70 80 90 100 110 172 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:25:36 2016 done: Tue Nov 8 07:25:37 2016 Total Scan time: 4.640 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]