FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5263, 172 aa 1>>>pF1KE5263 172 - 172 aa - 172 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.3179+/-0.000532; mu= 18.3219+/- 0.032 mean_var=54.4626+/-10.905, 0's: 0 Z-trim(112.7): 6 B-trim: 0 in 0/51 Lambda= 0.173790 statistics sampled from 13382 (13387) to 13382 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.777), E-opt: 0.2 (0.411), width: 16 Scan time: 1.560 The best scores are: opt bits E(32554) CCDS6974.1 CACFD1 gene_id:11094|Hs108|chr9 ( 172) 1151 295.4 1.2e-80 CCDS56591.1 CACFD1 gene_id:11094|Hs108|chr9 ( 233) 977 251.9 2e-67 CCDS48051.1 CACFD1 gene_id:11094|Hs108|chr9 ( 130) 470 124.5 2.4e-29 CCDS56592.1 CACFD1 gene_id:11094|Hs108|chr9 ( 191) 467 123.9 5.3e-29 >>CCDS6974.1 CACFD1 gene_id:11094|Hs108|chr9 (172 aa) initn: 1151 init1: 1151 opt: 1151 Z-score: 1561.6 bits: 295.4 E(32554): 1.2e-80 Smith-Waterman score: 1151; 100.0% identity (100.0% similar) in 172 aa overlap (1-172:1-172) 10 20 30 40 50 60 pF1KE5 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL 130 140 150 160 170 >>CCDS56591.1 CACFD1 gene_id:11094|Hs108|chr9 (233 aa) initn: 971 init1: 971 opt: 977 Z-score: 1324.1 bits: 251.9 E(32554): 2e-67 Smith-Waterman score: 977; 93.1% identity (96.2% similar) in 159 aa overlap (1-157:1-158) 10 20 30 40 50 60 pF1KE5 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 TLLGNAIAFATGVLYGLSALGKKG--DAISYARIQQQRQQADEEKLAETLEGEL :::::::::::::::::::::::. .: :.: :. :. CCDS56 TLLGNAIAFATGVLYGLSALGKKAQTEAGSFA-AQHPREPGPFSEGTRQAFATPAVVSGE 130 140 150 160 170 CCDS56 IRMPAGAMRSPMPGSSSRGSRRMRRSSRRPWRGSCEGLGAPPSLSPLLALCGSK 180 190 200 210 220 230 >>CCDS48051.1 CACFD1 gene_id:11094|Hs108|chr9 (130 aa) initn: 478 init1: 466 opt: 470 Z-score: 640.5 bits: 124.5 E(32554): 2.4e-29 Smith-Waterman score: 754; 75.0% identity (75.6% similar) in 172 aa overlap (1-172:1-130) 10 20 30 40 50 60 pF1KE5 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT ::::.: :::::::::::: CCDS48 GVWMMM------------------------------------------AVVPIVISLTLT 70 130 140 150 160 170 pF1KE5 TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 TLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQRQQADEEKLAETLEGEL 80 90 100 110 120 130 >>CCDS56592.1 CACFD1 gene_id:11094|Hs108|chr9 (191 aa) initn: 466 init1: 466 opt: 467 Z-score: 634.2 bits: 123.9 E(32554): 5.3e-29 Smith-Waterman score: 580; 66.0% identity (69.8% similar) in 159 aa overlap (1-157:1-116) 10 20 30 40 50 60 pF1KE5 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MSSSGGAPGASASSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITIHPLNIAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GVWMIMNAFILLLCEAPFCCQFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVISLTLT ::::.: :::::::::::: CCDS56 GVWMMM------------------------------------------AVVPIVISLTLT 70 130 140 150 160 170 pF1KE5 TLLGNAIAFATGVLYGLSALGKKG--DAISYARIQQQRQQADEEKLAETLEGEL :::::::::::::::::::::::. .: :.: :. :. CCDS56 TLLGNAIAFATGVLYGLSALGKKAQTEAGSFA-AQHPREPGPFSEGTRQAFATPAVVSGE 80 90 100 110 120 130 CCDS56 IRMPAGAMRSPMPGSSSRGSRRMRRSSRRPWRGSCEGLGAPPSLSPLLALCGSK 140 150 160 170 180 190 172 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:25:36 2016 done: Tue Nov 8 07:25:36 2016 Total Scan time: 1.560 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]