FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5540, 361 aa 1>>>pF1KE5540 361 - 361 aa - 361 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.1917+/-0.000992; mu= 0.8917+/- 0.059 mean_var=267.0082+/-53.681, 0's: 0 Z-trim(113.8): 34 B-trim: 11 in 1/52 Lambda= 0.078490 statistics sampled from 14416 (14441) to 14416 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.444), width: 16 Scan time: 2.100 The best scores are: opt bits E(32554) CCDS6962.1 SURF6 gene_id:6838|Hs108|chr9 ( 361) 2313 274.7 8.7e-74 >>CCDS6962.1 SURF6 gene_id:6838|Hs108|chr9 (361 aa) initn: 2313 init1: 2313 opt: 2313 Z-score: 1438.2 bits: 274.7 E(32554): 8.7e-74 Smith-Waterman score: 2313; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361) 10 20 30 40 50 60 pF1KE5 MASLLAKDAYLQSLAKKICSHSAPEQQARTRAGKTQGSETAGPPKKKRKKTQKKFRKREE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 MASLLAKDAYLQSLAKKICSHSAPEQQARTRAGKTQGSETAGPPKKKRKKTQKKFRKREE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 KAAEHKAKSLGEKSPAASGARRPEAAKEEAAWASSSAGNPADGLATEPESVFALDVLRQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 KAAEHKAKSLGEKSPAASGARRPEAAKEEAAWASSSAGNPADGLATEPESVFALDVLRQR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LHEKIQEARGQGSAKELSPAALEKRRRRKQERDRKKRKRKELRAKEKARKAEEATEAQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 LHEKIQEARGQGSAKELSPAALEKRRRRKQERDRKKRKRKELRAKEKARKAEEATEAQEV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 VEATPEGACTEPREPPGLIFNKVEVSEDEPASKAQRRKEKRQRVKGNLTPLTGRNYRQLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 VEATPEGACTEPREPPGLIFNKVEVSEDEPASKAQRRKEKRQRVKGNLTPLTGRNYRQLL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 ERLQARQSRLDELRGQDEGKAQELEAKMKWTNLLYKAEGVKIRDDERLLQEALKRKEKRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 ERLQARQSRLDELRGQDEGKAQELEAKMKWTNLLYKAEGVKIRDDERLLQEALKRKEKRR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 AQRQRRWEKRTAGVVEKMQQRQDRRRQNLRRKKAARAERRLLRARKKGRILPQDLERAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 AQRQRRWEKRTAGVVEKMQQRQDRRRQNLRRKKAARAERRLLRARKKGRILPQDLERAGL 310 320 330 340 350 360 pF1KE5 V : CCDS69 V 361 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:38:16 2016 done: Tue Nov 8 01:38:17 2016 Total Scan time: 2.100 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]