FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3022, 136 aa 1>>>pF1KE3022 136 - 136 aa - 136 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8997+/-0.00057; mu= 13.7481+/- 0.034 mean_var=63.5281+/-12.633, 0's: 0 Z-trim(112.9): 5 B-trim: 0 in 0/50 Lambda= 0.160913 statistics sampled from 13577 (13578) to 13577 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.79), E-opt: 0.2 (0.417), width: 16 Scan time: 1.660 The best scores are: opt bits E(32554) CCDS6936.1 QRFP gene_id:347148|Hs108|chr9 ( 136) 955 229.2 6.1e-61 >>CCDS6936.1 QRFP gene_id:347148|Hs108|chr9 (136 aa) initn: 955 init1: 955 opt: 955 Z-score: 1207.5 bits: 229.2 E(32554): 6.1e-61 Smith-Waterman score: 955; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136) 10 20 30 40 50 60 pF1KE3 MVRPYPLIYFLFLPLGACFPLLDRREPTDAMGGLGAGERWADLAMGPRPHSVWGSSRWLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 MVRPYPLIYFLFLPLGACFPLLDRREPTDAMGGLGAGERWADLAMGPRPHSVWGSSRWLR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ASQPQALLVIARGLQTSGREHAGCRFRFGRQDEGSEATGFLPAAGEKTSGPLGNLAEELN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 ASQPQALLVIARGLQTSGREHAGCRFRFGRQDEGSEATGFLPAAGEKTSGPLGNLAEELN 70 80 90 100 110 120 130 pF1KE3 GYSRKKGGFSFRFGRR :::::::::::::::: CCDS69 GYSRKKGGFSFRFGRR 130 136 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:40:10 2016 done: Sun Nov 6 15:40:10 2016 Total Scan time: 1.660 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]