FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1637, 152 aa 1>>>pF1KE1637 152 - 152 aa - 152 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8809+/-0.00067; mu= 13.6565+/- 0.040 mean_var=54.4403+/-10.849, 0's: 0 Z-trim(108.9): 7 B-trim: 0 in 0/51 Lambda= 0.173826 statistics sampled from 10545 (10549) to 10545 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.73), E-opt: 0.2 (0.324), width: 16 Scan time: 1.480 The best scores are: opt bits E(32554) CCDS6927.1 PTGES gene_id:9536|Hs108|chr9 ( 152) 1031 265.9 6.7e-72 CCDS8677.1 MGST1 gene_id:4257|Hs108|chr12 ( 155) 342 93.2 7e-20 >>CCDS6927.1 PTGES gene_id:9536|Hs108|chr9 (152 aa) initn: 1031 init1: 1031 opt: 1031 Z-score: 1404.4 bits: 265.9 E(32554): 6.7e-72 Smith-Waterman score: 1031; 100.0% identity (100.0% similar) in 152 aa overlap (1-152:1-152) 10 20 30 40 50 60 pF1KE1 MPAHSLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 MPAHSLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SDPDVERCLRAHRNDMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 SDPDVERCLRAHRNDMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGK 70 80 90 100 110 120 130 140 150 pF1KE1 LRAPIRSVTYTLAQLPCASMALQILWEAARHL :::::::::::::::::::::::::::::::: CCDS69 LRAPIRSVTYTLAQLPCASMALQILWEAARHL 130 140 150 >>CCDS8677.1 MGST1 gene_id:4257|Hs108|chr12 (155 aa) initn: 325 init1: 234 opt: 342 Z-score: 470.4 bits: 93.2 E(32554): 7e-20 Smith-Waterman score: 342; 39.9% identity (68.5% similar) in 143 aa overlap (7-145:7-149) 10 20 30 40 50 pF1KE1 MPAHSLVMSSPALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHG----GP ::.. .. :: .:... ::.... :. :: .:.:::::: . : . CCDS86 MVDLTQVMDDEVFMAFASYATIILSKMMLMSTATAFYRLTRKVFANPEDCVAFGKGENAK 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 QYCRSDPDVERCLRAHRNDMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVA .: :.: ::: ::: ::.:.: ::: .:..::. ::.: .: .:: .:. .:. ::.: CCDS86 KYLRTDDRVERVRRAHLNDLENIIPFLGIGLLYSLSGPDPSTAILHFRLFVGARIYHTIA 70 80 90 100 110 120 120 130 140 150 pF1KE1 YLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL :: : : :.... .. ::: ..: CCDS86 YLTPLPQPNRALSFFVGYGVTLSMAYRLLKSKLYL 130 140 150 152 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:40:38 2016 done: Sun Nov 6 15:40:38 2016 Total Scan time: 1.480 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]