Result of FASTA (omim) for pFN21AE1790
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1790, 297 aa
  1>>>pF1KE1790 297 - 297 aa - 297 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.1752+/-0.000312; mu= 13.1462+/- 0.020
 mean_var=99.1234+/-20.486, 0's: 0 Z-trim(118.7): 38  B-trim: 690 in 2/53
 Lambda= 0.128821
 statistics sampled from 31986 (32024) to 31986 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.728), E-opt: 0.2 (0.375), width:  16
 Scan time:  6.160

The best scores are:                                      opt bits E(85289)
NP_004426 (OMIM: 600440) endonuclease G, mitochond ( 297) 1990 379.5 4.2e-105
XP_011516649 (OMIM: 600440) PREDICTED: endonucleas ( 338) 1405 270.9 2.5e-72
NP_005098 (OMIM: 604051) nuclease EXOG, mitochondr ( 368)  603 121.8   2e-27
NP_001138936 (OMIM: 604051) nuclease EXOG, mitocho ( 318)  544 110.8 3.5e-24
XP_006713505 (OMIM: 604051) PREDICTED: nuclease EX ( 265)  535 109.1 9.7e-24
XP_005265692 (OMIM: 604051) PREDICTED: nuclease EX ( 224)  449 93.1 5.5e-19
XP_006713507 (OMIM: 604051) PREDICTED: nuclease EX ( 228)  405 84.9 1.6e-16
XP_005265690 (OMIM: 604051) PREDICTED: nuclease EX ( 228)  405 84.9 1.6e-16
XP_016863081 (OMIM: 604051) PREDICTED: nuclease EX ( 228)  405 84.9 1.6e-16
XP_016863076 (OMIM: 604051) PREDICTED: nuclease EX ( 228)  405 84.9 1.6e-16
XP_016863078 (OMIM: 604051) PREDICTED: nuclease EX ( 228)  405 84.9 1.6e-16
XP_016863080 (OMIM: 604051) PREDICTED: nuclease EX ( 228)  405 84.9 1.6e-16
NP_001305884 (OMIM: 604051) nuclease EXOG, mitocho ( 228)  405 84.9 1.6e-16
XP_016863075 (OMIM: 604051) PREDICTED: nuclease EX ( 228)  405 84.9 1.6e-16
XP_016863074 (OMIM: 604051) PREDICTED: nuclease EX ( 228)  405 84.9 1.6e-16
XP_016863077 (OMIM: 604051) PREDICTED: nuclease EX ( 228)  405 84.9 1.6e-16
NP_001305887 (OMIM: 604051) nuclease EXOG, mitocho ( 228)  405 84.9 1.6e-16
NP_001305885 (OMIM: 604051) nuclease EXOG, mitocho ( 228)  405 84.9 1.6e-16
NP_001305886 (OMIM: 604051) nuclease EXOG, mitocho ( 228)  405 84.9 1.6e-16
XP_016863082 (OMIM: 604051) PREDICTED: nuclease EX ( 228)  405 84.9 1.6e-16
NP_001305883 (OMIM: 604051) nuclease EXOG, mitocho ( 228)  405 84.9 1.6e-16
NP_001305888 (OMIM: 604051) nuclease EXOG, mitocho ( 228)  405 84.9 1.6e-16
XP_016863073 (OMIM: 604051) PREDICTED: nuclease EX ( 228)  405 84.9 1.6e-16
XP_016863079 (OMIM: 604051) PREDICTED: nuclease EX ( 228)  405 84.9 1.6e-16
XP_016863083 (OMIM: 604051) PREDICTED: nuclease EX ( 218)  161 39.5   0.007


>>NP_004426 (OMIM: 600440) endonuclease G, mitochondrial  (297 aa)
 initn: 1990 init1: 1990 opt: 1990  Z-score: 2007.9  bits: 379.5 E(85289): 4.2e-105
Smith-Waterman score: 1990; 99.7% identity (99.7% similar) in 297 aa overlap (1-297:1-297)

               10        20        30        40        50        60
pF1KE1 MRALRAGLTLALGAGLGAVVEGWRRRREDARAAPGLLGRLPVLPVAAAAELPPVPGGPRG
       ::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MRALRAGLTLASGAGLGAVVEGWRRRREDARAAPGLLGRLPVLPVAAAAELPPVPGGPRG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 PGELAKYGLPGLAQLKSRESYVLCYDPRTRGALWVVEQLRPERLRGDGDRRECDFREDDS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PGELAKYGLPGLAQLKSRESYVLCYDPRTRGALWVVEQLRPERLRGDGDRRECDFREDDS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 VHAYHRATNADYRGSGFDRGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VHAYHRATNADYRGSGFDRGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 KYSRSLTRSYQNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEAAGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KYSRSLTRSYQNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEAAGG
              190       200       210       220       230       240

              250       260       270       280       290       
pF1KE1 QIELRTYVMPNAPVDEAIPLERFLVPIESIERASGLLFVPNILARAGSLKAITAGSK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 QIELRTYVMPNAPVDEAIPLERFLVPIESIERASGLLFVPNILARAGSLKAITAGSK
              250       260       270       280       290       

>>XP_011516649 (OMIM: 600440) PREDICTED: endonuclease G,  (338 aa)
 initn: 1405 init1: 1405 opt: 1405  Z-score: 1419.5  bits: 270.9 E(85289): 2.5e-72
Smith-Waterman score: 1405; 95.8% identity (97.6% similar) in 212 aa overlap (1-212:90-301)

                                             10        20        30
pF1KE1                               MRALRAGLTLALGAGLGAVVEGWRRRREDA
                                     ::::::::::: ::::::::::::::::::
XP_011 APAALCPRWIPRRGSFKSLAGRPPLGRSPAMRALRAGLTLASGAGLGAVVEGWRRRREDA
      60        70        80        90       100       110         

               40        50        60        70        80        90
pF1KE1 RAAPGLLGRLPVLPVAAAAELPPVPGGPRGPGELAKYGLPGLAQLKSRESYVLCYDPRTR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RAAPGLLGRLPVLPVAAAAELPPVPGGPRGPGELAKYGLPGLAQLKSRESYVLCYDPRTR
     120       130       140       150       160       170         

              100       110       120       130       140       150
pF1KE1 GALWVVEQLRPERLRGDGDRRECDFREDDSVHAYHRATNADYRGSGFDRGHLAAAANHRW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GALWVVEQLRPERLRGDGDRRECDFREDDSVHAYHRATNADYRGSGFDRGHLAAAANHRW
     180       190       200       210       220       230         

              160       170       180       190       200       210
pF1KE1 SQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKYSRSLTRSYQNVYVCTGPLFLPRTEADGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::   ...
XP_011 SQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKYSRSLTRSYQNVYVCTGPLFLPRLGMESR
     240       250       260       270       280       290         

              220       230       240       250       260       270
pF1KE1 SYVKYQVIGKNHVAVPTHFFKVLILEAAGGQIELRTYVMPNAPVDEAIPLERFLVPIESI
        .                                                          
XP_011 PHHLVPWCCGQMTCVPLCKTCDLLVDVTCFPRAWSMDRG                     
     300       310       320       330                             

>>NP_005098 (OMIM: 604051) nuclease EXOG, mitochondrial   (368 aa)
 initn: 501 init1: 501 opt: 603  Z-score: 613.4  bits: 121.8 E(85289): 2e-27
Smith-Waterman score: 603; 39.1% identity (70.0% similar) in 243 aa overlap (55-292:53-293)

           30        40        50        60        70          80  
pF1KE1 RRREDARAAPGLLGRLPVLPVAAAAELPPVPGGPRGPGELAKYGLPGLAQLKSR--ESYV
                                     : :    . : ..:.: :.  ..:   ...
NP_005 GAVVGAAGAGLAALQFFRSQGAEGALTGKQPDGSAEKAVLEQFGFP-LTGTEARCYTNHA
             30        40        50        60         70        80 

             90       100       110       120       130       140  
pF1KE1 LCYDPRTRGALWVVEQLRPERLRGDGDRRECDFREDDSVHAYHRATNADYRGSGFDRGHL
       : ::   :   ::.:..   .. ::.::..: :. : ..     : : :: :::..:::.
NP_005 LSYDQAKRVPRWVLEHISKSKIMGDADRKHCKFKPDPNIPPTFSAFNEDYVGSGWSRGHM
              90       100       110       120       130       140 

            150       160       170       180       190       200  
pF1KE1 AAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKYSRSLTRSYQNVYVCTGPLFL
       : :.:...:.::: .::::::..::    :.. :: .: : : ::. ...:.: .::: :
NP_005 APAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCRELTERFEDVWVVSGPLTL
             150       160       170       180       190       200 

            210       220       230       240          250         
pF1KE1 PRTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEAAGGQIE---LRTYVMPNAPVDEAIP
       :.:..:::. :.:::::...::::.:..::.. . .. . :   : ..:.::  .     
NP_005 PQTRGDGKKIVSYQVIGEDNVAVPSHLYKVILARRSSVSTEPLALGAFVVPNEAIGFQPQ
             210       220       230       240       250       260 

     260       270       280       290                             
pF1KE1 LERFLVPIESIERASGLLFVPNILARAGSLKAITAGSK                      
       : .: : ....:. :::.: :. : :..... :                           
NP_005 LTEFQVSLQDLEKLSGLVFFPH-LDRTSDIRNICSVDTCKLLDFQEFTLYLSTRKIEGAR
             270       280        290       300       310       320

NP_005 SVLRLEKIMENLKNAEIEPDDYFMSRYEKKLEELKAKEQSGTQIRKPS
              330       340       350       360        

>>NP_001138936 (OMIM: 604051) nuclease EXOG, mitochondri  (318 aa)
 initn: 479 init1: 460 opt: 544  Z-score: 555.1  bits: 110.8 E(85289): 3.5e-24
Smith-Waterman score: 544; 40.9% identity (72.6% similar) in 208 aa overlap (88-292:40-243)

        60        70        80        90       100       110       
pF1KE1 PRGPGELAKYGLPGLAQLKSRESYVLCYDPRTRGALWVVEQLRPERLRGDGDRRECDFRE
                                     :..::  ..   .:.   ::.::..: :. 
NP_001 LRGSRRFLSGFVAGAVVGAAGAGLAALQFFRSQGAEGALTGKQPD---GDADRKHCKFKP
      10        20        30        40        50           60      

       120       130       140       150       160       170       
pF1KE1 DDSVHAYHRATNADYRGSGFDRGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWN
       : ..     : : :: :::..:::.: :.:...:.::: .::::::..::    :.. ::
NP_001 DPNIPPTFSAFNEDYVGSGWSRGHMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWN
         70        80        90       100       110       120      

       180       190       200       210       220       230       
pF1KE1 NLEKYSRSLTRSYQNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEA
        .: : : ::. ...:.: .::: ::.:..:::. :.:::::...::::.:..::.. . 
NP_001 RIEMYCRELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYKVILARR
        130       140       150       160       170       180      

       240          250       260       270       280       290    
pF1KE1 AGGQIE---LRTYVMPNAPVDEAIPLERFLVPIESIERASGLLFVPNILARAGSLKAITA
       .. . :   : ..:.::  .     : .: : ....:. :::.: :. : :..... :  
NP_001 SSVSTEPLALGAFVVPNEAIGFQPQLTEFQVSLQDLEKLSGLVFFPH-LDRTSDIRNICS
        190       200       210       220       230        240     

                                                                   
pF1KE1 GSK                                                         
                                                                   
NP_001 VDTCKLLDFQEFTLYLSTRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEKKLEELK
         250       260       270       280       290       300     

>>XP_006713505 (OMIM: 604051) PREDICTED: nuclease EXOG,   (265 aa)
 initn: 541 init1: 460 opt: 535  Z-score: 547.2  bits: 109.1 E(85289): 9.7e-24
Smith-Waterman score: 535; 42.6% identity (74.2% similar) in 190 aa overlap (106-292:2-190)

          80        90       100       110       120       130     
pF1KE1 KSRESYVLCYDPRTRGALWVVEQLRPERLRGDGDRRECDFREDDSVHAYHRATNADYRGS
                                     ::.::..: :. : ..     : : :: ::
XP_006                              MGDADRKHCKFKPDPNIPPTFSAFNEDYVGS
                                            10        20        30 

         140       150       160       170       180       190     
pF1KE1 GFDRGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKYSRSLTRSYQNVYV
       :..:::.: :.:...:.::: .::::::..::    :.. :: .: : : ::. ...:.:
XP_006 GWSRGHMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCRELTERFEDVWV
              40        50        60        70        80        90 

         200       210       220       230       240          250  
pF1KE1 CTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEAAGGQIE---LRTYVMPNA
        .::: ::.:..:::. :.:::::...::::.:..::.. . .. . :   : ..:.:: 
XP_006 VSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYKVILARRSSVSTEPLALGAFVVPNE
             100       110       120       130       140       150 

            260       270       280       290                      
pF1KE1 PVDEAIPLERFLVPIESIERASGLLFVPNILARAGSLKAITAGSK               
        .     : .: : ....:. :::.: :. : :..... :                    
XP_006 AIGFQPQLTEFQVSLQDLEKLSGLVFFPH-LDRTSDIRNICSVDTCKLLDFQEFTLYLST
             160       170       180        190       200       210

XP_006 RKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEKKLEELKAKEQSGTQIRKPS
              220       230       240       250       260     

>>XP_005265692 (OMIM: 604051) PREDICTED: nuclease EXOG,   (224 aa)
 initn: 429 init1: 429 opt: 449  Z-score: 461.8  bits: 93.1 E(85289): 5.5e-19
Smith-Waterman score: 449; 41.5% identity (69.5% similar) in 164 aa overlap (55-216:53-215)

           30        40        50        60        70          80  
pF1KE1 RRREDARAAPGLLGRLPVLPVAAAAELPPVPGGPRGPGELAKYGLPGLAQLKSR--ESYV
                                     : :    . : ..:.: :.  ..:   ...
XP_005 GAVVGAAGAGLAALQFFRSQGAEGALTGKQPDGSAEKAVLEQFGFP-LTGTEARCYTNHA
             30        40        50        60         70        80 

             90       100       110       120       130       140  
pF1KE1 LCYDPRTRGALWVVEQLRPERLRGDGDRRECDFREDDSVHAYHRATNADYRGSGFDRGHL
       : ::   :   ::.:..   .. ::.::..: :. : ..     : : :: :::..:::.
XP_005 LSYDQAKRVPRWVLEHISKSKIMGDADRKHCKFKPDPNIPPTFSAFNEDYVGSGWSRGHM
              90       100       110       120       130       140 

            150       160       170       180       190       200  
pF1KE1 AAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKYSRSLTRSYQNVYVCTGPLFL
       : :.:...:.::: .::::::..::    :.. :: .: : : ::. ...:.: .::: :
XP_005 APAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCRELTERFEDVWVVSGPLTL
             150       160       170       180       190       200 

            210       220       230       240       250       260  
pF1KE1 PRTEADGKSYVKYQVIGKNHVAVPTHFFKVLILEAAGGQIELRTYVMPNAPVDEAIPLER
       :.:..:::. :.::                                              
XP_005 PQTRGDGKKIVSYQSWEYPSLQF                                     
             210       220                                         

>>XP_006713507 (OMIM: 604051) PREDICTED: nuclease EXOG,   (228 aa)
 initn: 382 init1: 301 opt: 405  Z-score: 417.5  bits: 84.9 E(85289): 1.6e-16
Smith-Waterman score: 405; 41.6% identity (75.3% similar) in 154 aa overlap (142-292:1-153)

             120       130       140       150       160       170 
pF1KE1 ECDFREDDSVHAYHRATNADYRGSGFDRGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHL
                                     .: :.:...:.::: .::::::..::    
XP_006                               MAPAGNNKFSSKAMAETFYLSNIVPQDFDN
                                             10        20        30

             180       190       200       210       220       230 
pF1KE1 NQNAWNNLEKYSRSLTRSYQNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFK
       :.. :: .: : : ::. ...:.: .::: ::.:..:::. :.:::::...::::.:..:
XP_006 NSGYWNRIEMYCRELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYK
               40        50        60        70        80        90

             240          250       260       270       280        
pF1KE1 VLILEAAGGQIE---LRTYVMPNAPVDEAIPLERFLVPIESIERASGLLFVPNILARAGS
       :.. . .. . :   : ..:.::  .     : .: : ....:. :::.: :. : :...
XP_006 VILARRSSVSTEPLALGAFVVPNEAIGFQPQLTEFQVSLQDLEKLSGLVFFPH-LDRTSD
              100       110       120       130       140          

      290                                                          
pF1KE1 LKAITAGSK                                                   
       .. :                                                        
XP_006 IRNICSVDTCKLLDFQEFTLYLSTRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEK
     150       160       170       180       190       200         

>>XP_005265690 (OMIM: 604051) PREDICTED: nuclease EXOG,   (228 aa)
 initn: 382 init1: 301 opt: 405  Z-score: 417.5  bits: 84.9 E(85289): 1.6e-16
Smith-Waterman score: 405; 41.6% identity (75.3% similar) in 154 aa overlap (142-292:1-153)

             120       130       140       150       160       170 
pF1KE1 ECDFREDDSVHAYHRATNADYRGSGFDRGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHL
                                     .: :.:...:.::: .::::::..::    
XP_005                               MAPAGNNKFSSKAMAETFYLSNIVPQDFDN
                                             10        20        30

             180       190       200       210       220       230 
pF1KE1 NQNAWNNLEKYSRSLTRSYQNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFK
       :.. :: .: : : ::. ...:.: .::: ::.:..:::. :.:::::...::::.:..:
XP_005 NSGYWNRIEMYCRELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYK
               40        50        60        70        80        90

             240          250       260       270       280        
pF1KE1 VLILEAAGGQIE---LRTYVMPNAPVDEAIPLERFLVPIESIERASGLLFVPNILARAGS
       :.. . .. . :   : ..:.::  .     : .: : ....:. :::.: :. : :...
XP_005 VILARRSSVSTEPLALGAFVVPNEAIGFQPQLTEFQVSLQDLEKLSGLVFFPH-LDRTSD
              100       110       120       130       140          

      290                                                          
pF1KE1 LKAITAGSK                                                   
       .. :                                                        
XP_005 IRNICSVDTCKLLDFQEFTLYLSTRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEK
     150       160       170       180       190       200         

>>XP_016863081 (OMIM: 604051) PREDICTED: nuclease EXOG,   (228 aa)
 initn: 382 init1: 301 opt: 405  Z-score: 417.5  bits: 84.9 E(85289): 1.6e-16
Smith-Waterman score: 405; 41.6% identity (75.3% similar) in 154 aa overlap (142-292:1-153)

             120       130       140       150       160       170 
pF1KE1 ECDFREDDSVHAYHRATNADYRGSGFDRGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHL
                                     .: :.:...:.::: .::::::..::    
XP_016                               MAPAGNNKFSSKAMAETFYLSNIVPQDFDN
                                             10        20        30

             180       190       200       210       220       230 
pF1KE1 NQNAWNNLEKYSRSLTRSYQNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFK
       :.. :: .: : : ::. ...:.: .::: ::.:..:::. :.:::::...::::.:..:
XP_016 NSGYWNRIEMYCRELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYK
               40        50        60        70        80        90

             240          250       260       270       280        
pF1KE1 VLILEAAGGQIE---LRTYVMPNAPVDEAIPLERFLVPIESIERASGLLFVPNILARAGS
       :.. . .. . :   : ..:.::  .     : .: : ....:. :::.: :. : :...
XP_016 VILARRSSVSTEPLALGAFVVPNEAIGFQPQLTEFQVSLQDLEKLSGLVFFPH-LDRTSD
              100       110       120       130       140          

      290                                                          
pF1KE1 LKAITAGSK                                                   
       .. :                                                        
XP_016 IRNICSVDTCKLLDFQEFTLYLSTRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEK
     150       160       170       180       190       200         

>>XP_016863076 (OMIM: 604051) PREDICTED: nuclease EXOG,   (228 aa)
 initn: 382 init1: 301 opt: 405  Z-score: 417.5  bits: 84.9 E(85289): 1.6e-16
Smith-Waterman score: 405; 41.6% identity (75.3% similar) in 154 aa overlap (142-292:1-153)

             120       130       140       150       160       170 
pF1KE1 ECDFREDDSVHAYHRATNADYRGSGFDRGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHL
                                     .: :.:...:.::: .::::::..::    
XP_016                               MAPAGNNKFSSKAMAETFYLSNIVPQDFDN
                                             10        20        30

             180       190       200       210       220       230 
pF1KE1 NQNAWNNLEKYSRSLTRSYQNVYVCTGPLFLPRTEADGKSYVKYQVIGKNHVAVPTHFFK
       :.. :: .: : : ::. ...:.: .::: ::.:..:::. :.:::::...::::.:..:
XP_016 NSGYWNRIEMYCRELTERFEDVWVVSGPLTLPQTRGDGKKIVSYQVIGEDNVAVPSHLYK
               40        50        60        70        80        90

             240          250       260       270       280        
pF1KE1 VLILEAAGGQIE---LRTYVMPNAPVDEAIPLERFLVPIESIERASGLLFVPNILARAGS
       :.. . .. . :   : ..:.::  .     : .: : ....:. :::.: :. : :...
XP_016 VILARRSSVSTEPLALGAFVVPNEAIGFQPQLTEFQVSLQDLEKLSGLVFFPH-LDRTSD
              100       110       120       130       140          

      290                                                          
pF1KE1 LKAITAGSK                                                   
       .. :                                                        
XP_016 IRNICSVDTCKLLDFQEFTLYLSTRKIEGARSVLRLEKIMENLKNAEIEPDDYFMSRYEK
     150       160       170       180       190       200         




297 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 15:41:09 2016 done: Sun Nov  6 15:41:10 2016
 Total Scan time:  6.160 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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